Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00703 and MPMX19_00704 are separated by 149 nucleotides MPMX19_00704 and MPMX19_00705 are separated by 264 nucleotides MPMX19_00705 and MPMX19_00706 overlap by 1 nucleotides
MPMX19_00703: MPMX19_00703 - Tol-Pal system protein TolB, at 723,658 to 725,010
_00703
MPMX19_00704: MPMX19_00704 - Peptidoglycan-associated lipoprotein, at 725,160 to 725,630
_00704
MPMX19_00705: MPMX19_00705 - Cell division coordinator CpoB, at 725,895 to 726,749
_00705
MPMX19_00706: MPMX19_00706 - tRNA(Ile)-lysidine synthase, at 726,749 to 728,104
_00706
Position (kb)
725
726
727 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 725.022 kb on + strand at 725.022 kb on + strand at 725.628 kb on + strand at 725.628 kb on + strand at 725.629 kb on - strand at 725.629 kb on - strand at 725.629 kb on - strand at 725.629 kb on - strand at 725.629 kb on - strand at 725.727 kb on + strand at 725.728 kb on - strand at 725.728 kb on - strand at 725.728 kb on - strand at 725.728 kb on - strand at 725.806 kb on + strand at 725.806 kb on + strand at 725.807 kb on - strand at 725.831 kb on + strand at 725.831 kb on + strand at 725.888 kb on + strand at 725.888 kb on + strand at 725.888 kb on + strand at 726.414 kb on + strand, within MPMX19_00705 at 726.414 kb on + strand, within MPMX19_00705 at 726.414 kb on + strand, within MPMX19_00705 at 726.507 kb on + strand, within MPMX19_00705 at 726.507 kb on + strand, within MPMX19_00705 at 726.507 kb on + strand, within MPMX19_00705 at 726.507 kb on + strand, within MPMX19_00705 at 726.507 kb on + strand, within MPMX19_00705 at 726.507 kb on + strand, within MPMX19_00705 at 726.507 kb on + strand, within MPMX19_00705 at 726.507 kb on + strand, within MPMX19_00705 at 726.507 kb on + strand, within MPMX19_00705 at 726.510 kb on + strand, within MPMX19_00705 at 726.510 kb on + strand, within MPMX19_00705 at 726.510 kb on + strand, within MPMX19_00705 at 726.510 kb on + strand, within MPMX19_00705 at 726.510 kb on + strand, within MPMX19_00705 at 726.510 kb on + strand, within MPMX19_00705 at 726.510 kb on + strand, within MPMX19_00705 at 726.510 kb on + strand, within MPMX19_00705
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 725,022 + -1.2 725,022 + -1.1 725,628 + +0.6 725,628 + -0.2 725,629 - +0.4 725,629 - -1.8 725,629 - +0.1 725,629 - +0.7 725,629 - -1.0 725,727 + -1.5 725,728 - -0.3 725,728 - -0.4 725,728 - -2.1 725,728 - +0.7 725,806 + -1.1 725,806 + +0.1 725,807 - +1.7 725,831 + -0.7 725,831 + +2.3 725,888 + -1.7 725,888 + +1.1 725,888 + +0.3 726,414 + MPMX19_00705 0.61 -1.1 726,414 + MPMX19_00705 0.61 -0.1 726,414 + MPMX19_00705 0.61 -0.6 726,507 + MPMX19_00705 0.72 -1.3 726,507 + MPMX19_00705 0.72 -0.6 726,507 + MPMX19_00705 0.72 +0.1 726,507 + MPMX19_00705 0.72 -0.3 726,507 + MPMX19_00705 0.72 -1.3 726,507 + MPMX19_00705 0.72 -2.6 726,507 + MPMX19_00705 0.72 +1.1 726,507 + MPMX19_00705 0.72 +1.7 726,507 + MPMX19_00705 0.72 +0.5 726,510 + MPMX19_00705 0.72 -1.4 726,510 + MPMX19_00705 0.72 -0.3 726,510 + MPMX19_00705 0.72 -0.6 726,510 + MPMX19_00705 0.72 +0.1 726,510 + MPMX19_00705 0.72 -1.1 726,510 + MPMX19_00705 0.72 -1.6 726,510 + MPMX19_00705 0.72 +0.1 726,510 + MPMX19_00705 0.72 -1.9
Or see this region's nucleotide sequence