Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00654 and MPMX19_00655 are separated by 562 nucleotides MPMX19_00655 and MPMX19_00656 are separated by 39 nucleotides
MPMX19_00654: MPMX19_00654 - hypothetical protein, at 673,187 to 673,834
_00654
MPMX19_00655: MPMX19_00655 - hypothetical protein, at 674,397 to 675,704
_00655
MPMX19_00656: MPMX19_00656 - Sensor histidine kinase RcsC, at 675,744 to 677,462
_00656
Position (kb) 674
675
676 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.575 kb on + strand, within MPMX19_00654 at 673.575 kb on + strand, within MPMX19_00654 at 673.575 kb on + strand, within MPMX19_00654 at 673.576 kb on - strand, within MPMX19_00654 at 673.576 kb on - strand, within MPMX19_00654 at 673.848 kb on + strand at 673.848 kb on + strand at 673.849 kb on - strand at 673.849 kb on - strand at 673.849 kb on - strand at 673.849 kb on - strand at 673.929 kb on + strand at 673.930 kb on - strand at 673.978 kb on + strand at 673.978 kb on + strand at 673.978 kb on + strand at 673.979 kb on - strand at 673.979 kb on - strand at 673.979 kb on - strand at 674.017 kb on + strand at 674.125 kb on + strand at 674.126 kb on - strand at 674.135 kb on + strand at 674.136 kb on - strand at 674.163 kb on + strand at 674.163 kb on + strand at 674.164 kb on - strand at 674.164 kb on - strand at 674.193 kb on + strand at 674.228 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 675.438 kb on + strand, within MPMX19_00655 at 675.438 kb on + strand, within MPMX19_00655 at 675.438 kb on + strand, within MPMX19_00655 at 675.438 kb on + strand, within MPMX19_00655 at 675.438 kb on + strand, within MPMX19_00655 at 675.438 kb on + strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.439 kb on - strand, within MPMX19_00655 at 675.745 kb on + strand at 675.745 kb on + strand at 675.746 kb on - strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.877 kb on + strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 675.878 kb on - strand at 676.300 kb on + strand, within MPMX19_00656 at 676.300 kb on + strand, within MPMX19_00656 at 676.300 kb on + strand, within MPMX19_00656 at 676.300 kb on + strand, within MPMX19_00656 at 676.301 kb on - strand, within MPMX19_00656 at 676.301 kb on - strand, within MPMX19_00656 at 676.301 kb on - strand, within MPMX19_00656
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 673,557 + MPMX19_00654 0.57 +0.1 673,557 + MPMX19_00654 0.57 -0.5 673,557 + MPMX19_00654 0.57 -0.2 673,557 + MPMX19_00654 0.57 +1.7 673,557 + MPMX19_00654 0.57 +0.1 673,557 + MPMX19_00654 0.57 -0.6 673,557 + MPMX19_00654 0.57 -0.1 673,557 + MPMX19_00654 0.57 -0.1 673,557 + MPMX19_00654 0.57 +1.7 673,557 + MPMX19_00654 0.57 -1.4 673,557 + MPMX19_00654 0.57 -1.5 673,557 + MPMX19_00654 0.57 -1.9 673,557 + MPMX19_00654 0.57 +0.4 673,557 + MPMX19_00654 0.57 -1.4 673,557 + MPMX19_00654 0.57 +0.6 673,557 + MPMX19_00654 0.57 -0.1 673,557 + MPMX19_00654 0.57 +1.1 673,557 + MPMX19_00654 0.57 -0.7 673,557 + MPMX19_00654 0.57 -0.5 673,557 + MPMX19_00654 0.57 -1.3 673,557 + MPMX19_00654 0.57 +0.4 673,557 + MPMX19_00654 0.57 +0.5 673,557 + MPMX19_00654 0.57 -0.3 673,557 + MPMX19_00654 0.57 +0.2 673,557 + MPMX19_00654 0.57 -0.1 673,558 - MPMX19_00654 0.57 -1.1 673,558 - MPMX19_00654 0.57 +0.3 673,558 - MPMX19_00654 0.57 -0.5 673,558 - MPMX19_00654 0.57 -1.3 673,558 - MPMX19_00654 0.57 -0.0 673,558 - MPMX19_00654 0.57 -0.9 673,558 - MPMX19_00654 0.57 -1.1 673,558 - MPMX19_00654 0.57 +0.4 673,558 - MPMX19_00654 0.57 -1.6 673,558 - MPMX19_00654 0.57 -1.0 673,558 - MPMX19_00654 0.57 -0.9 673,558 - MPMX19_00654 0.57 +0.4 673,558 - MPMX19_00654 0.57 +0.7 673,558 - MPMX19_00654 0.57 -3.2 673,558 - MPMX19_00654 0.57 -0.1 673,558 - MPMX19_00654 0.57 -2.5 673,558 - MPMX19_00654 0.57 +0.8 673,558 - MPMX19_00654 0.57 -0.6 673,558 - MPMX19_00654 0.57 -0.8 673,558 - MPMX19_00654 0.57 -0.2 673,558 - MPMX19_00654 0.57 -0.2 673,558 - MPMX19_00654 0.57 +0.2 673,558 - MPMX19_00654 0.57 -0.1 673,558 - MPMX19_00654 0.57 +1.1 673,558 - MPMX19_00654 0.57 +0.7 673,558 - MPMX19_00654 0.57 +1.7 673,558 - MPMX19_00654 0.57 +0.8 673,575 + MPMX19_00654 0.60 +0.7 673,575 + MPMX19_00654 0.60 -2.6 673,575 + MPMX19_00654 0.60 +1.4 673,576 - MPMX19_00654 0.60 +0.4 673,576 - MPMX19_00654 0.60 -0.5 673,848 + -0.6 673,848 + -1.9 673,849 - -0.6 673,849 - +0.7 673,849 - +0.9 673,849 - -2.2 673,929 + -0.7 673,930 - +1.5 673,978 + -1.8 673,978 + -0.9 673,978 + +1.1 673,979 - +0.7 673,979 - +0.4 673,979 - -1.3 674,017 + -0.8 674,125 + -0.9 674,126 - -1.0 674,135 + -0.6 674,136 - +0.0 674,163 + -1.1 674,163 + -1.9 674,164 - -1.0 674,164 - -0.6 674,193 + -1.3 674,228 + +0.8 674,370 + -1.3 674,370 + -1.8 674,370 + +0.2 674,370 + +0.3 674,370 + -0.6 674,370 + -0.7 674,370 + -0.4 674,370 + +0.7 674,370 + -1.6 674,370 + +0.1 674,371 - -1.5 674,371 - -0.3 674,371 - -0.2 674,371 - -1.3 674,371 - -0.5 674,371 - -1.0 674,371 - +0.2 674,371 - -0.3 675,438 + MPMX19_00655 0.80 -0.8 675,438 + MPMX19_00655 0.80 +0.1 675,438 + MPMX19_00655 0.80 -1.0 675,438 + MPMX19_00655 0.80 -1.3 675,438 + MPMX19_00655 0.80 -0.3 675,438 + MPMX19_00655 0.80 -1.8 675,439 - MPMX19_00655 0.80 -0.6 675,439 - MPMX19_00655 0.80 +0.3 675,439 - MPMX19_00655 0.80 -1.8 675,439 - MPMX19_00655 0.80 -1.1 675,439 - MPMX19_00655 0.80 -0.3 675,439 - MPMX19_00655 0.80 +0.7 675,439 - MPMX19_00655 0.80 -0.7 675,439 - MPMX19_00655 0.80 -0.9 675,439 - MPMX19_00655 0.80 -1.8 675,439 - MPMX19_00655 0.80 -0.9 675,439 - MPMX19_00655 0.80 -1.9 675,439 - MPMX19_00655 0.80 -0.1 675,439 - MPMX19_00655 0.80 +0.0 675,745 + +0.1 675,745 + -0.6 675,746 - +0.5 675,877 + +0.9 675,877 + +0.3 675,877 + -1.4 675,877 + -0.3 675,877 + -0.5 675,877 + -1.5 675,877 + -0.6 675,877 + +0.5 675,877 + -0.0 675,877 + +0.1 675,877 + -0.5 675,878 - +0.0 675,878 - -1.0 675,878 - -1.2 675,878 - +1.1 675,878 - -0.6 675,878 - -0.3 675,878 - -1.5 675,878 - -0.7 675,878 - -1.5 675,878 - +0.3 675,878 - -1.1 675,878 - -1.5 675,878 - +0.9 676,300 + MPMX19_00656 0.32 +0.2 676,300 + MPMX19_00656 0.32 +0.8 676,300 + MPMX19_00656 0.32 -1.6 676,300 + MPMX19_00656 0.32 -2.6 676,301 - MPMX19_00656 0.32 -1.8 676,301 - MPMX19_00656 0.32 +1.7 676,301 - MPMX19_00656 0.32 +0.1
Or see this region's nucleotide sequence