Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00572 and MPMX19_00573 are separated by 20 nucleotides MPMX19_00573 and MPMX19_00574 are separated by 142 nucleotides MPMX19_00574 and MPMX19_00575 are separated by 216 nucleotides
MPMX19_00572: MPMX19_00572 - Type-4 uracil-DNA glycosylase, at 587,167 to 587,772
_00572
MPMX19_00573: MPMX19_00573 - hypothetical protein, at 587,793 to 588,452
_00573
MPMX19_00574: MPMX19_00574 - hypothetical protein, at 588,595 to 589,440
_00574
MPMX19_00575: MPMX19_00575 - 4-hydroxybenzoate octaprenyltransferase, at 589,657 to 590,604
_00575
Position (kb)
588
589
590 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.692 kb on + strand, within MPMX19_00572 at 587.693 kb on - strand, within MPMX19_00572 at 587.693 kb on - strand, within MPMX19_00572 at 587.693 kb on - strand, within MPMX19_00572 at 587.693 kb on - strand, within MPMX19_00572 at 587.693 kb on - strand, within MPMX19_00572 at 587.693 kb on - strand, within MPMX19_00572 at 587.693 kb on - strand, within MPMX19_00572 at 587.693 kb on - strand, within MPMX19_00572 at 587.872 kb on + strand, within MPMX19_00573 at 587.872 kb on + strand, within MPMX19_00573 at 587.872 kb on + strand, within MPMX19_00573 at 587.872 kb on + strand, within MPMX19_00573 at 587.872 kb on + strand, within MPMX19_00573 at 587.872 kb on + strand, within MPMX19_00573 at 587.872 kb on + strand, within MPMX19_00573 at 587.873 kb on - strand, within MPMX19_00573 at 587.873 kb on - strand, within MPMX19_00573 at 587.873 kb on - strand, within MPMX19_00573 at 587.873 kb on - strand, within MPMX19_00573 at 587.873 kb on - strand, within MPMX19_00573 at 587.873 kb on - strand, within MPMX19_00573 at 587.873 kb on - strand, within MPMX19_00573 at 587.873 kb on - strand, within MPMX19_00573 at 587.908 kb on + strand, within MPMX19_00573 at 587.908 kb on + strand, within MPMX19_00573 at 587.908 kb on + strand, within MPMX19_00573 at 587.908 kb on + strand, within MPMX19_00573 at 587.908 kb on + strand, within MPMX19_00573 at 587.908 kb on + strand, within MPMX19_00573 at 587.908 kb on + strand, within MPMX19_00573 at 587.908 kb on + strand, within MPMX19_00573 at 587.909 kb on - strand, within MPMX19_00573 at 587.909 kb on - strand, within MPMX19_00573 at 587.909 kb on - strand, within MPMX19_00573 at 587.909 kb on - strand, within MPMX19_00573 at 588.001 kb on + strand, within MPMX19_00573 at 588.001 kb on + strand, within MPMX19_00573 at 588.001 kb on + strand, within MPMX19_00573 at 588.002 kb on - strand, within MPMX19_00573 at 588.295 kb on + strand, within MPMX19_00573 at 588.296 kb on - strand, within MPMX19_00573 at 588.296 kb on - strand, within MPMX19_00573 at 588.296 kb on - strand, within MPMX19_00573 at 588.296 kb on - strand, within MPMX19_00573 at 588.296 kb on - strand, within MPMX19_00573 at 588.296 kb on - strand, within MPMX19_00573 at 588.375 kb on + strand, within MPMX19_00573 at 588.417 kb on - strand at 588.452 kb on + strand at 588.452 kb on + strand at 588.452 kb on + strand at 588.452 kb on + strand at 588.452 kb on + strand at 588.452 kb on + strand at 588.453 kb on - strand at 588.453 kb on - strand at 588.453 kb on - strand at 588.503 kb on + strand at 588.503 kb on + strand at 588.503 kb on + strand at 588.504 kb on - strand at 588.504 kb on - strand at 588.512 kb on + strand at 588.512 kb on + strand at 588.512 kb on + strand at 588.512 kb on + strand at 588.513 kb on - strand at 588.513 kb on - strand at 588.513 kb on - strand at 588.516 kb on + strand at 588.516 kb on + strand at 588.516 kb on + strand at 588.517 kb on - strand at 588.517 kb on - strand at 588.517 kb on - strand at 588.517 kb on - strand at 588.517 kb on - strand at 588.517 kb on - strand at 588.530 kb on + strand at 588.530 kb on + strand at 588.531 kb on - strand at 588.531 kb on - strand at 588.531 kb on - strand at 588.531 kb on - strand at 588.657 kb on + strand at 588.728 kb on + strand, within MPMX19_00574 at 588.728 kb on + strand, within MPMX19_00574 at 588.728 kb on + strand, within MPMX19_00574 at 588.772 kb on + strand, within MPMX19_00574 at 588.772 kb on + strand, within MPMX19_00574 at 588.772 kb on + strand, within MPMX19_00574 at 588.772 kb on + strand, within MPMX19_00574 at 588.772 kb on + strand, within MPMX19_00574 at 588.773 kb on - strand, within MPMX19_00574 at 588.773 kb on - strand, within MPMX19_00574 at 588.773 kb on - strand, within MPMX19_00574 at 588.773 kb on - strand, within MPMX19_00574 at 588.773 kb on - strand, within MPMX19_00574 at 589.018 kb on + strand, within MPMX19_00574 at 589.018 kb on + strand, within MPMX19_00574 at 589.018 kb on + strand, within MPMX19_00574 at 589.028 kb on - strand, within MPMX19_00574 at 589.447 kb on + strand at 589.447 kb on + strand at 589.447 kb on + strand at 589.447 kb on + strand at 589.447 kb on + strand at 589.447 kb on + strand at 589.447 kb on + strand at 589.557 kb on + strand at 589.557 kb on + strand at 589.557 kb on + strand at 589.558 kb on - strand at 589.558 kb on - strand at 589.558 kb on - strand at 589.558 kb on - strand at 589.558 kb on - strand at 589.558 kb on - strand at 589.558 kb on - strand at 589.618 kb on + strand at 589.659 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 587,692 + MPMX19_00572 0.87 +2.0 587,692 + MPMX19_00572 0.87 +1.7 587,692 + MPMX19_00572 0.87 -1.1 587,692 + MPMX19_00572 0.87 -0.6 587,692 + MPMX19_00572 0.87 +0.7 587,692 + MPMX19_00572 0.87 +0.0 587,692 + MPMX19_00572 0.87 +0.1 587,692 + MPMX19_00572 0.87 -0.9 587,692 + MPMX19_00572 0.87 -1.3 587,692 + MPMX19_00572 0.87 -0.5 587,692 + MPMX19_00572 0.87 -1.9 587,693 - MPMX19_00572 0.87 -0.3 587,693 - MPMX19_00572 0.87 -0.8 587,693 - MPMX19_00572 0.87 -2.4 587,693 - MPMX19_00572 0.87 -1.5 587,693 - MPMX19_00572 0.87 -1.1 587,693 - MPMX19_00572 0.87 +0.1 587,693 - MPMX19_00572 0.87 +0.1 587,693 - MPMX19_00572 0.87 +0.1 587,872 + MPMX19_00573 0.12 -0.8 587,872 + MPMX19_00573 0.12 -0.2 587,872 + MPMX19_00573 0.12 -0.2 587,872 + MPMX19_00573 0.12 +0.2 587,872 + MPMX19_00573 0.12 +0.2 587,872 + MPMX19_00573 0.12 -2.2 587,872 + MPMX19_00573 0.12 +0.6 587,873 - MPMX19_00573 0.12 +0.7 587,873 - MPMX19_00573 0.12 -1.0 587,873 - MPMX19_00573 0.12 +0.5 587,873 - MPMX19_00573 0.12 +0.0 587,873 - MPMX19_00573 0.12 -0.8 587,873 - MPMX19_00573 0.12 -2.0 587,873 - MPMX19_00573 0.12 -0.8 587,873 - MPMX19_00573 0.12 -0.4 587,908 + MPMX19_00573 0.17 -0.9 587,908 + MPMX19_00573 0.17 -0.3 587,908 + MPMX19_00573 0.17 -1.1 587,908 + MPMX19_00573 0.17 -1.0 587,908 + MPMX19_00573 0.17 -0.7 587,908 + MPMX19_00573 0.17 -1.8 587,908 + MPMX19_00573 0.17 -0.7 587,908 + MPMX19_00573 0.17 -1.2 587,909 - MPMX19_00573 0.18 +0.7 587,909 - MPMX19_00573 0.18 -0.6 587,909 - MPMX19_00573 0.18 +0.2 587,909 - MPMX19_00573 0.18 +0.3 588,001 + MPMX19_00573 0.32 +0.2 588,001 + MPMX19_00573 0.32 -0.8 588,001 + MPMX19_00573 0.32 -1.4 588,002 - MPMX19_00573 0.32 -0.8 588,295 + MPMX19_00573 0.76 -0.6 588,296 - MPMX19_00573 0.76 -1.1 588,296 - MPMX19_00573 0.76 -0.6 588,296 - MPMX19_00573 0.76 -0.3 588,296 - MPMX19_00573 0.76 -1.1 588,296 - MPMX19_00573 0.76 +0.3 588,296 - MPMX19_00573 0.76 +0.4 588,375 + MPMX19_00573 0.88 -0.7 588,417 - +0.6 588,452 + -0.2 588,452 + -0.1 588,452 + -1.4 588,452 + +0.4 588,452 + -1.2 588,452 + +0.8 588,453 - -1.0 588,453 - +0.1 588,453 - +0.5 588,503 + -0.6 588,503 + -1.0 588,503 + +0.2 588,504 - +0.3 588,504 - -0.0 588,512 + -0.5 588,512 + +0.7 588,512 + -0.7 588,512 + -2.1 588,513 - -0.1 588,513 - -1.9 588,513 - +0.1 588,516 + +1.4 588,516 + +1.4 588,516 + -0.4 588,517 - +0.5 588,517 - -0.4 588,517 - -1.5 588,517 - -0.1 588,517 - -1.5 588,517 - +1.3 588,530 + -0.5 588,530 + +1.0 588,531 - -1.6 588,531 - -0.5 588,531 - +1.1 588,531 - -0.3 588,657 + -1.5 588,728 + MPMX19_00574 0.16 -1.0 588,728 + MPMX19_00574 0.16 -1.8 588,728 + MPMX19_00574 0.16 -2.0 588,772 + MPMX19_00574 0.21 -0.2 588,772 + MPMX19_00574 0.21 -2.2 588,772 + MPMX19_00574 0.21 -1.4 588,772 + MPMX19_00574 0.21 -0.1 588,772 + MPMX19_00574 0.21 +0.3 588,773 - MPMX19_00574 0.21 +0.1 588,773 - MPMX19_00574 0.21 +0.7 588,773 - MPMX19_00574 0.21 -1.6 588,773 - MPMX19_00574 0.21 -1.2 588,773 - MPMX19_00574 0.21 -1.5 589,018 + MPMX19_00574 0.50 -0.6 589,018 + MPMX19_00574 0.50 +0.7 589,018 + MPMX19_00574 0.50 +0.9 589,028 - MPMX19_00574 0.51 +1.4 589,447 + -0.1 589,447 + +0.5 589,447 + -0.1 589,447 + -1.8 589,447 + +0.9 589,447 + -0.3 589,447 + -0.2 589,557 + +0.4 589,557 + -1.0 589,557 + -2.2 589,558 - -0.5 589,558 - -1.2 589,558 - -0.0 589,558 - +0.1 589,558 - -1.2 589,558 - -1.1 589,558 - +1.0 589,618 + -0.8 589,659 - -0.7
Or see this region's nucleotide sequence