Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00491 and MPMX19_00492 are separated by 119 nucleotides MPMX19_00492 and MPMX19_00493 are separated by 34 nucleotides MPMX19_00493 and MPMX19_00494 are separated by 121 nucleotides MPMX19_00494 and MPMX19_00495 are separated by 96 nucleotides
MPMX19_00491: MPMX19_00491 - hypothetical protein, at 491,525 to 492,484
_00491
MPMX19_00492: MPMX19_00492 - Cobalamin biosynthesis protein CbiB, at 492,604 to 493,587
_00492
MPMX19_00493: MPMX19_00493 - hypothetical protein, at 493,622 to 494,197
_00493
MPMX19_00494: MPMX19_00494 - hypothetical protein, at 494,319 to 494,462
_00494
MPMX19_00495: MPMX19_00495 - hypothetical protein, at 494,559 to 495,191
_00495
Position (kb) 492
493
494 Strain fitness (log2 ratio) -2
-1
0
1
2 at 491.646 kb on + strand, within MPMX19_00491 at 491.646 kb on + strand, within MPMX19_00491 at 491.646 kb on + strand, within MPMX19_00491 at 491.647 kb on - strand, within MPMX19_00491 at 491.673 kb on + strand, within MPMX19_00491 at 491.674 kb on - strand, within MPMX19_00491 at 491.674 kb on - strand, within MPMX19_00491 at 491.674 kb on - strand, within MPMX19_00491 at 491.674 kb on - strand, within MPMX19_00491 at 491.712 kb on + strand, within MPMX19_00491 at 491.712 kb on + strand, within MPMX19_00491 at 491.712 kb on + strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.907 kb on + strand, within MPMX19_00491 at 491.907 kb on + strand, within MPMX19_00491 at 491.907 kb on + strand, within MPMX19_00491 at 491.907 kb on + strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 492.294 kb on + strand, within MPMX19_00491 at 492.294 kb on + strand, within MPMX19_00491 at 492.294 kb on + strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.415 kb on + strand at 492.415 kb on + strand at 492.415 kb on + strand at 492.415 kb on + strand at 492.415 kb on + strand at 492.415 kb on + strand at 492.416 kb on - strand at 492.416 kb on - strand at 492.416 kb on - strand at 492.416 kb on - strand at 492.478 kb on + strand at 492.510 kb on + strand at 492.510 kb on + strand at 492.510 kb on + strand at 492.511 kb on - strand at 492.511 kb on - strand at 492.511 kb on - strand at 492.511 kb on - strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.518 kb on + strand at 492.518 kb on + strand at 492.518 kb on + strand at 492.518 kb on + strand at 492.518 kb on + strand at 492.519 kb on - strand at 492.519 kb on - strand at 492.519 kb on - strand at 492.519 kb on - strand at 492.519 kb on - strand at 492.519 kb on - strand at 493.076 kb on + strand, within MPMX19_00492 at 493.077 kb on - strand, within MPMX19_00492 at 493.077 kb on - strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.655 kb on + strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 494.233 kb on + strand at 494.233 kb on + strand at 494.236 kb on + strand at 494.236 kb on + strand at 494.236 kb on + strand at 494.236 kb on + strand at 494.236 kb on + strand at 494.237 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 491,646 + MPMX19_00491 0.13 -0.6 491,646 + MPMX19_00491 0.13 -0.5 491,646 + MPMX19_00491 0.13 -0.3 491,647 - MPMX19_00491 0.13 -2.5 491,673 + MPMX19_00491 0.15 -0.2 491,674 - MPMX19_00491 0.16 -0.5 491,674 - MPMX19_00491 0.16 -0.3 491,674 - MPMX19_00491 0.16 +0.5 491,674 - MPMX19_00491 0.16 +0.1 491,712 + MPMX19_00491 0.19 -0.3 491,712 + MPMX19_00491 0.19 -0.1 491,712 + MPMX19_00491 0.19 -1.3 491,713 - MPMX19_00491 0.20 -0.3 491,713 - MPMX19_00491 0.20 +0.5 491,713 - MPMX19_00491 0.20 -0.6 491,713 - MPMX19_00491 0.20 -0.5 491,713 - MPMX19_00491 0.20 -2.6 491,850 + MPMX19_00491 0.34 +0.2 491,850 + MPMX19_00491 0.34 -0.6 491,850 + MPMX19_00491 0.34 -0.2 491,850 + MPMX19_00491 0.34 -0.2 491,850 + MPMX19_00491 0.34 +0.1 491,851 - MPMX19_00491 0.34 -0.0 491,851 - MPMX19_00491 0.34 -0.7 491,851 - MPMX19_00491 0.34 -1.6 491,851 - MPMX19_00491 0.34 -1.4 491,851 - MPMX19_00491 0.34 -1.0 491,851 - MPMX19_00491 0.34 -0.6 491,907 + MPMX19_00491 0.40 -2.3 491,907 + MPMX19_00491 0.40 +0.6 491,907 + MPMX19_00491 0.40 -0.3 491,907 + MPMX19_00491 0.40 -0.6 491,908 - MPMX19_00491 0.40 -1.0 491,908 - MPMX19_00491 0.40 +1.4 491,908 - MPMX19_00491 0.40 -0.1 491,908 - MPMX19_00491 0.40 -0.3 491,908 - MPMX19_00491 0.40 +0.1 491,908 - MPMX19_00491 0.40 -1.8 491,908 - MPMX19_00491 0.40 -1.5 491,908 - MPMX19_00491 0.40 +0.5 491,908 - MPMX19_00491 0.40 -1.5 491,908 - MPMX19_00491 0.40 +1.7 492,294 + MPMX19_00491 0.80 -1.2 492,294 + MPMX19_00491 0.80 +1.5 492,294 + MPMX19_00491 0.80 +0.5 492,295 - MPMX19_00491 0.80 +0.5 492,295 - MPMX19_00491 0.80 +0.2 492,295 - MPMX19_00491 0.80 -0.8 492,295 - MPMX19_00491 0.80 -1.0 492,295 - MPMX19_00491 0.80 -0.1 492,295 - MPMX19_00491 0.80 -0.0 492,415 + -0.4 492,415 + +0.2 492,415 + -1.0 492,415 + +1.0 492,415 + -1.6 492,415 + -2.0 492,416 - -0.5 492,416 - +0.2 492,416 - +0.4 492,416 - -0.9 492,478 + -0.3 492,510 + +0.4 492,510 + -1.8 492,510 + -1.0 492,511 - +0.3 492,511 - -0.9 492,511 - +0.7 492,511 - -0.5 492,513 + -0.9 492,513 + -1.2 492,513 + +0.6 492,513 + -0.0 492,513 + +1.4 492,513 + -1.3 492,513 + +0.1 492,513 + +0.5 492,513 + -0.7 492,513 + -0.3 492,513 + -0.8 492,513 + +0.3 492,513 + -1.1 492,513 + +0.8 492,513 + -1.5 492,513 + +0.4 492,514 - -0.7 492,514 - +1.1 492,514 - +0.4 492,514 - -0.6 492,514 - -1.9 492,514 - -0.9 492,514 - -0.5 492,514 - -1.8 492,514 - +1.2 492,514 - -0.4 492,514 - -1.3 492,514 - +1.0 492,514 - -1.0 492,514 - -1.1 492,514 - -2.4 492,514 - -1.9 492,514 - +0.7 492,514 - +0.1 492,514 - +1.0 492,514 - +2.0 492,514 - +0.5 492,514 - -1.0 492,514 - -1.2 492,514 - -1.0 492,516 + -2.4 492,516 + -1.0 492,516 + +0.7 492,516 + +0.3 492,516 + -0.8 492,516 + +0.8 492,516 + +0.6 492,516 + +0.0 492,516 + -0.5 492,516 + -0.2 492,516 + +0.3 492,516 + +0.7 492,516 + -0.5 492,516 + -1.0 492,516 + -1.8 492,516 + -0.2 492,517 - -1.0 492,517 - -0.1 492,517 - +0.0 492,517 - -1.9 492,517 - -0.1 492,517 - -0.1 492,517 - +0.3 492,517 - -0.1 492,517 - -2.0 492,517 - -1.3 492,517 - +0.9 492,517 - -0.4 492,517 - -2.3 492,517 - -1.3 492,517 - +0.1 492,517 - +1.0 492,518 + +0.2 492,518 + -0.2 492,518 + -0.3 492,518 + -0.8 492,518 + +0.0 492,519 - -0.3 492,519 - -1.5 492,519 - +1.7 492,519 - -0.6 492,519 - -0.9 492,519 - -2.6 493,076 + MPMX19_00492 0.48 +1.4 493,077 - MPMX19_00492 0.48 +1.1 493,077 - MPMX19_00492 0.48 -1.2 493,166 + MPMX19_00492 0.57 +0.5 493,166 + MPMX19_00492 0.57 +0.2 493,166 + MPMX19_00492 0.57 -0.5 493,166 + MPMX19_00492 0.57 -0.1 493,166 + MPMX19_00492 0.57 -0.5 493,166 + MPMX19_00492 0.57 +0.3 493,166 + MPMX19_00492 0.57 -0.0 493,167 - MPMX19_00492 0.57 +0.1 493,167 - MPMX19_00492 0.57 +1.4 493,167 - MPMX19_00492 0.57 -0.4 493,167 - MPMX19_00492 0.57 +0.4 493,167 - MPMX19_00492 0.57 +0.1 493,167 - MPMX19_00492 0.57 +0.7 493,655 + -0.2 493,656 - +0.3 493,656 - -0.0 493,656 - +0.4 493,656 - +1.4 493,656 - +1.9 493,656 - -0.8 493,656 - +0.3 493,656 - +0.5 494,233 + +0.1 494,233 + +0.2 494,236 + -1.8 494,236 + -0.1 494,236 + -0.1 494,236 + -0.0 494,236 + +0.8 494,237 - -0.1
Or see this region's nucleotide sequence