Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00325 and MPMX19_00326 are separated by 41 nucleotides MPMX19_00326 and MPMX19_00327 are separated by 101 nucleotides MPMX19_00327 and MPMX19_00328 are separated by 8 nucleotides MPMX19_00328 and MPMX19_00329 are separated by 15 nucleotides MPMX19_00329 and MPMX19_00330 overlap by 35 nucleotides
MPMX19_00325: MPMX19_00325 - tRNA (guanine-N(1)-)-methyltransferase, at 329,493 to 330,302
_00325
MPMX19_00326: MPMX19_00326 - 50S ribosomal protein L19, at 330,344 to 330,739
_00326
MPMX19_00327: MPMX19_00327 - 50S ribosomal protein L34, at 330,841 to 330,975
_00327
MPMX19_00328: MPMX19_00328 - Ribonuclease P protein component, at 330,984 to 331,370
_00328
MPMX19_00329: MPMX19_00329 - Putative membrane protein insertion efficiency factor, at 331,386 to 331,715
_00329
MPMX19_00330: MPMX19_00330 - Membrane protein insertase YidC, at 331,681 to 333,498
_00330
Position (kb) 330
331 Strain fitness (log2 ratio) -2
-1
0
1 at 330.244 kb on + strand at 330.244 kb on + strand at 330.244 kb on + strand at 330.244 kb on + strand at 331.368 kb on + strand at 331.368 kb on + strand at 331.368 kb on + strand at 331.369 kb on - strand at 331.369 kb on - strand at 331.369 kb on - strand at 331.369 kb on - strand at 331.369 kb on - strand at 331.369 kb on - strand at 331.440 kb on + strand, within MPMX19_00329 at 331.440 kb on + strand, within MPMX19_00329 at 331.440 kb on + strand, within MPMX19_00329 at 331.440 kb on + strand, within MPMX19_00329 at 331.440 kb on + strand, within MPMX19_00329 at 331.440 kb on + strand, within MPMX19_00329 at 331.440 kb on + strand, within MPMX19_00329 at 331.441 kb on - strand, within MPMX19_00329 at 331.441 kb on - strand, within MPMX19_00329 at 331.441 kb on - strand, within MPMX19_00329 at 331.441 kb on - strand, within MPMX19_00329 at 331.441 kb on - strand, within MPMX19_00329 at 331.441 kb on - strand, within MPMX19_00329 at 331.509 kb on + strand, within MPMX19_00329 at 331.509 kb on + strand, within MPMX19_00329 at 331.509 kb on + strand, within MPMX19_00329 at 331.509 kb on + strand, within MPMX19_00329 at 331.509 kb on + strand, within MPMX19_00329 at 331.509 kb on + strand, within MPMX19_00329 at 331.509 kb on + strand, within MPMX19_00329 at 331.510 kb on - strand, within MPMX19_00329 at 331.510 kb on - strand, within MPMX19_00329 at 331.510 kb on - strand, within MPMX19_00329 at 331.510 kb on - strand, within MPMX19_00329
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 330,244 + +0.0 330,244 + -2.2 330,244 + -0.9 330,244 + -0.1 331,368 + -1.6 331,368 + +0.4 331,368 + -0.3 331,369 - -0.8 331,369 - +1.3 331,369 - -0.8 331,369 - +0.5 331,369 - +0.7 331,369 - -0.1 331,440 + MPMX19_00329 0.16 -0.6 331,440 + MPMX19_00329 0.16 -0.5 331,440 + MPMX19_00329 0.16 -0.6 331,440 + MPMX19_00329 0.16 +0.3 331,440 + MPMX19_00329 0.16 -0.1 331,440 + MPMX19_00329 0.16 -1.9 331,440 + MPMX19_00329 0.16 -2.0 331,441 - MPMX19_00329 0.17 -1.6 331,441 - MPMX19_00329 0.17 +0.1 331,441 - MPMX19_00329 0.17 -1.3 331,441 - MPMX19_00329 0.17 -1.2 331,441 - MPMX19_00329 0.17 -2.4 331,441 - MPMX19_00329 0.17 +0.3 331,509 + MPMX19_00329 0.37 -1.1 331,509 + MPMX19_00329 0.37 -1.0 331,509 + MPMX19_00329 0.37 -0.0 331,509 + MPMX19_00329 0.37 -0.0 331,509 + MPMX19_00329 0.37 -1.5 331,509 + MPMX19_00329 0.37 +0.7 331,509 + MPMX19_00329 0.37 -0.2 331,510 - MPMX19_00329 0.38 -0.1 331,510 - MPMX19_00329 0.38 -0.2 331,510 - MPMX19_00329 0.38 -1.1 331,510 - MPMX19_00329 0.38 -0.8
Or see this region's nucleotide sequence