Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00298 and MPMX19_00299 are separated by 88 nucleotides MPMX19_00299 and MPMX19_00300 are separated by 577 nucleotides MPMX19_00300 and MPMX19_00301 are separated by 235 nucleotides
MPMX19_00298: MPMX19_00298 - hypothetical protein, at 297,877 to 298,935
_00298
MPMX19_00299: MPMX19_00299 - hypothetical protein, at 299,024 to 300,079
_00299
MPMX19_00300: MPMX19_00300 - 50S ribosomal protein L36, at 300,657 to 300,782
_00300
MPMX19_00301: MPMX19_00301 - putative FAD-linked oxidoreductase, at 301,018 to 302,505
_00301
Position (kb) 299
300
301 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 298.045 kb on + strand, within MPMX19_00298 at 298.079 kb on - strand, within MPMX19_00298 at 298.079 kb on - strand, within MPMX19_00298 at 298.079 kb on - strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.864 kb on + strand at 298.864 kb on + strand at 298.864 kb on + strand at 298.864 kb on + strand at 298.865 kb on - strand at 298.865 kb on - strand at 298.865 kb on - strand at 299.000 kb on - strand at 299.000 kb on - strand at 299.000 kb on - strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.094 kb on + strand at 299.094 kb on + strand at 299.094 kb on + strand at 299.094 kb on + strand at 299.095 kb on - strand at 299.095 kb on - strand at 299.095 kb on - strand at 299.095 kb on - strand at 299.095 kb on - strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.233 kb on + strand, within MPMX19_00299 at 299.233 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.661 kb on + strand, within MPMX19_00299 at 299.662 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.913 kb on + strand, within MPMX19_00299 at 300.111 kb on + strand at 300.112 kb on - strand at 300.112 kb on - strand at 300.136 kb on + strand at 300.162 kb on + strand at 300.269 kb on - strand at 300.272 kb on + strand at 300.272 kb on + strand at 300.273 kb on - strand at 300.273 kb on - strand at 300.273 kb on - strand at 300.284 kb on - strand at 300.284 kb on - strand at 300.284 kb on - strand at 300.403 kb on - strand at 300.405 kb on - strand at 300.448 kb on - strand at 300.465 kb on + strand at 300.466 kb on - strand at 300.953 kb on + strand at 300.953 kb on + strand at 300.953 kb on + strand at 300.953 kb on + strand at 300.953 kb on + strand at 300.953 kb on + strand at 300.954 kb on - strand at 300.954 kb on - strand at 300.971 kb on + strand at 300.971 kb on + strand at 300.971 kb on + strand at 300.971 kb on + strand at 300.971 kb on + strand at 300.972 kb on - strand at 300.972 kb on - strand at 300.972 kb on - strand at 300.972 kb on - strand at 301.003 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 298,045 + MPMX19_00298 0.16 -0.2 298,079 - MPMX19_00298 0.19 +0.5 298,079 - MPMX19_00298 0.19 -1.4 298,079 - MPMX19_00298 0.19 -0.9 298,234 + MPMX19_00298 0.34 -0.7 298,234 + MPMX19_00298 0.34 +0.5 298,234 + MPMX19_00298 0.34 -0.2 298,234 + MPMX19_00298 0.34 -1.1 298,234 + MPMX19_00298 0.34 +0.4 298,234 + MPMX19_00298 0.34 -0.2 298,234 + MPMX19_00298 0.34 -0.7 298,324 + MPMX19_00298 0.42 -1.7 298,324 + MPMX19_00298 0.42 +1.3 298,324 + MPMX19_00298 0.42 +0.1 298,324 + MPMX19_00298 0.42 -0.2 298,324 + MPMX19_00298 0.42 -0.9 298,324 + MPMX19_00298 0.42 +2.0 298,325 - MPMX19_00298 0.42 +0.2 298,325 - MPMX19_00298 0.42 -0.7 298,325 - MPMX19_00298 0.42 +0.4 298,325 - MPMX19_00298 0.42 -1.6 298,325 - MPMX19_00298 0.42 +0.0 298,325 - MPMX19_00298 0.42 -0.6 298,325 - MPMX19_00298 0.42 -2.0 298,325 - MPMX19_00298 0.42 -0.2 298,325 - MPMX19_00298 0.42 -0.5 298,325 - MPMX19_00298 0.42 -1.1 298,831 + -1.0 298,831 + -1.8 298,831 + +1.0 298,831 + -0.7 298,831 + +1.0 298,831 + +0.6 298,831 + -0.2 298,831 + -0.1 298,832 - -0.4 298,832 - +0.5 298,832 - -0.1 298,832 - +0.9 298,832 - -0.9 298,832 - +0.4 298,832 - -0.4 298,864 + -0.1 298,864 + -1.2 298,864 + +0.0 298,864 + +0.1 298,865 - -1.6 298,865 - +0.9 298,865 - +0.5 299,000 - -0.6 299,000 - +0.1 299,000 - +1.5 299,025 + -0.7 299,025 + +0.6 299,025 + +0.8 299,025 + +0.4 299,025 + -0.9 299,025 + -1.3 299,025 + -0.1 299,025 + -1.1 299,025 + -0.6 299,025 + -0.7 299,025 + -1.2 299,025 + -0.4 299,025 + -3.3 299,026 - +0.6 299,026 - -1.3 299,026 - -0.4 299,026 - -0.7 299,026 - +0.2 299,026 - -0.7 299,026 - -0.5 299,026 - -0.6 299,026 - -0.8 299,026 - -1.8 299,026 - -0.2 299,026 - +0.7 299,026 - -1.6 299,026 - +0.1 299,026 - -0.1 299,094 + -0.5 299,094 + -1.5 299,094 + -1.6 299,094 + +0.1 299,095 - +0.1 299,095 - -0.6 299,095 - -0.7 299,095 - +0.3 299,095 - -2.1 299,127 + -0.1 299,127 + +2.1 299,127 + -1.6 299,127 + +0.4 299,127 + -0.6 299,127 + -0.9 299,127 + -1.1 299,127 + -0.5 299,127 + -1.0 299,128 - -0.5 299,128 - +0.1 299,128 - -0.8 299,128 - -0.3 299,128 - +0.0 299,128 - -1.1 299,128 - -1.7 299,128 - -0.5 299,128 - +0.6 299,233 + MPMX19_00299 0.20 -0.2 299,233 + MPMX19_00299 0.20 -1.6 299,355 + MPMX19_00299 0.31 -1.2 299,355 + MPMX19_00299 0.31 -0.0 299,355 + MPMX19_00299 0.31 +0.0 299,355 + MPMX19_00299 0.31 -0.7 299,355 + MPMX19_00299 0.31 -0.5 299,355 + MPMX19_00299 0.31 -1.5 299,355 + MPMX19_00299 0.31 +0.1 299,355 + MPMX19_00299 0.31 +1.3 299,355 + MPMX19_00299 0.31 +0.8 299,355 + MPMX19_00299 0.31 -1.0 299,355 + MPMX19_00299 0.31 -0.7 299,355 + MPMX19_00299 0.31 +0.6 299,355 + MPMX19_00299 0.31 -0.3 299,355 + MPMX19_00299 0.31 -0.6 299,355 + MPMX19_00299 0.31 -0.4 299,355 + MPMX19_00299 0.31 -0.7 299,355 + MPMX19_00299 0.31 +0.7 299,355 + MPMX19_00299 0.31 -0.1 299,355 + MPMX19_00299 0.31 -0.4 299,355 + MPMX19_00299 0.31 -0.2 299,355 + MPMX19_00299 0.31 +1.0 299,355 + MPMX19_00299 0.31 -1.0 299,355 + MPMX19_00299 0.31 -0.6 299,356 - MPMX19_00299 0.31 +1.9 299,356 - MPMX19_00299 0.31 -1.3 299,356 - MPMX19_00299 0.31 -1.6 299,356 - MPMX19_00299 0.31 -1.9 299,356 - MPMX19_00299 0.31 -0.2 299,356 - MPMX19_00299 0.31 -0.7 299,356 - MPMX19_00299 0.31 -1.6 299,356 - MPMX19_00299 0.31 -0.9 299,356 - MPMX19_00299 0.31 -1.2 299,356 - MPMX19_00299 0.31 -0.8 299,356 - MPMX19_00299 0.31 -1.2 299,356 - MPMX19_00299 0.31 -1.8 299,356 - MPMX19_00299 0.31 -1.1 299,634 + MPMX19_00299 0.58 -0.6 299,634 + MPMX19_00299 0.58 +1.5 299,634 + MPMX19_00299 0.58 +0.4 299,634 + MPMX19_00299 0.58 -0.5 299,634 + MPMX19_00299 0.58 +1.7 299,635 - MPMX19_00299 0.58 -0.7 299,635 - MPMX19_00299 0.58 -1.2 299,635 - MPMX19_00299 0.58 -0.2 299,635 - MPMX19_00299 0.58 -2.2 299,635 - MPMX19_00299 0.58 -1.4 299,635 - MPMX19_00299 0.58 +0.7 299,661 + MPMX19_00299 0.60 -1.2 299,662 - MPMX19_00299 0.60 +0.1 299,725 - MPMX19_00299 0.66 -0.6 299,725 - MPMX19_00299 0.66 +0.9 299,725 - MPMX19_00299 0.66 -0.6 299,725 - MPMX19_00299 0.66 -0.5 299,725 - MPMX19_00299 0.66 -1.5 299,725 - MPMX19_00299 0.66 -0.9 299,913 + MPMX19_00299 0.84 +0.1 300,111 + -0.4 300,112 - -0.6 300,112 - +1.2 300,136 + -0.2 300,162 + -0.4 300,269 - -0.5 300,272 + -1.1 300,272 + +0.3 300,273 - +0.7 300,273 - +0.5 300,273 - +0.1 300,284 - -2.2 300,284 - +0.3 300,284 - +0.8 300,403 - +0.7 300,405 - -0.8 300,448 - -1.2 300,465 + -1.0 300,466 - +0.1 300,953 + +0.5 300,953 + -1.8 300,953 + -0.6 300,953 + +0.8 300,953 + +0.3 300,953 + -0.4 300,954 - +0.7 300,954 - +1.3 300,971 + -0.6 300,971 + -0.9 300,971 + -0.7 300,971 + -2.1 300,971 + -0.5 300,972 - -0.9 300,972 - -0.8 300,972 - +0.2 300,972 - -1.5 301,003 + +0.9
Or see this region's nucleotide sequence