Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00115 and MPMX19_00116 are separated by 125 nucleotides MPMX19_00116 and MPMX19_00117 are separated by 115 nucleotides MPMX19_00117 and MPMX19_00118 are separated by 371 nucleotides
MPMX19_00115: MPMX19_00115 - hypothetical protein, at 124,045 to 126,819
_00115
MPMX19_00116: MPMX19_00116 - Large-conductance mechanosensitive channel, at 126,945 to 127,418
_00116
MPMX19_00117: MPMX19_00117 - Protein translocase subunit SecA, at 127,534 to 130,269
_00117
MPMX19_00118: MPMX19_00118 - putative parvulin-type peptidyl-prolyl cis-trans isomerase, at 130,641 to 131,699
_00118
Position (kb) 127
128
129
130
131 Strain fitness (log2 ratio) -2
-1
0
1 at 126.843 kb on - strand at 126.843 kb on - strand at 126.843 kb on - strand at 126.843 kb on - strand at 126.855 kb on - strand at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.228 kb on + strand, within MPMX19_00116 at 127.229 kb on - strand, within MPMX19_00116 at 127.229 kb on - strand, within MPMX19_00116 at 127.229 kb on - strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.256 kb on - strand, within MPMX19_00116 at 127.256 kb on - strand, within MPMX19_00116 at 127.478 kb on - strand at 127.478 kb on - strand at 127.478 kb on - strand at 130.285 kb on - strand at 130.285 kb on - strand at 130.285 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.330 kb on - strand at 130.330 kb on - strand at 130.330 kb on - strand at 130.330 kb on - strand at 130.524 kb on - strand at 130.524 kb on - strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.598 kb on + strand at 130.598 kb on + strand at 130.598 kb on + strand at 130.598 kb on + strand at 130.598 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.609 kb on - strand at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 131.046 kb on + strand, within MPMX19_00118 at 131.046 kb on + strand, within MPMX19_00118 at 131.046 kb on + strand, within MPMX19_00118 at 131.046 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.178 kb on + strand, within MPMX19_00118 at 131.178 kb on + strand, within MPMX19_00118 at 131.178 kb on + strand, within MPMX19_00118
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 126,843 - +1.3 126,843 - +0.7 126,843 - -0.1 126,843 - +0.2 126,855 - -0.8 127,180 + MPMX19_00116 0.50 -0.0 127,180 + MPMX19_00116 0.50 +1.7 127,180 + MPMX19_00116 0.50 +1.5 127,180 + MPMX19_00116 0.50 +0.4 127,180 + MPMX19_00116 0.50 +0.2 127,180 + MPMX19_00116 0.50 +0.0 127,180 + MPMX19_00116 0.50 -0.4 127,180 + MPMX19_00116 0.50 +0.7 127,181 - MPMX19_00116 0.50 +1.3 127,181 - MPMX19_00116 0.50 +0.6 127,181 - MPMX19_00116 0.50 -0.3 127,181 - MPMX19_00116 0.50 -2.4 127,181 - MPMX19_00116 0.50 +0.1 127,181 - MPMX19_00116 0.50 -2.4 127,228 + MPMX19_00116 0.60 -0.5 127,229 - MPMX19_00116 0.60 -2.0 127,229 - MPMX19_00116 0.60 +0.5 127,229 - MPMX19_00116 0.60 +0.2 127,255 + MPMX19_00116 0.65 -0.1 127,255 + MPMX19_00116 0.65 +0.2 127,255 + MPMX19_00116 0.65 -1.8 127,255 + MPMX19_00116 0.65 -1.3 127,255 + MPMX19_00116 0.65 -0.3 127,256 - MPMX19_00116 0.66 -0.5 127,256 - MPMX19_00116 0.66 +0.0 127,478 - -0.2 127,478 - +0.1 127,478 - -1.2 130,285 - -0.4 130,285 - -1.2 130,285 - -0.3 130,324 - -1.1 130,324 - -0.9 130,324 - +0.5 130,324 - +0.3 130,324 - -0.4 130,324 - -1.3 130,324 - +0.6 130,324 - +0.1 130,324 - +0.0 130,324 - +1.1 130,324 - -1.1 130,324 - -0.1 130,324 - -0.2 130,324 - +1.4 130,324 - -0.7 130,324 - -1.1 130,324 - -0.9 130,324 - -0.3 130,330 - -0.8 130,330 - +0.1 130,330 - -0.9 130,330 - +0.5 130,524 - -0.1 130,524 - -1.0 130,546 + -0.0 130,546 + -0.1 130,546 + -0.1 130,546 + -1.1 130,546 + -0.3 130,546 + -1.0 130,546 + -0.4 130,546 + -0.6 130,546 + -0.5 130,546 + +0.7 130,546 + +0.4 130,546 + -0.1 130,546 + -0.3 130,547 - -0.4 130,547 - +0.4 130,547 - -1.1 130,547 - +0.0 130,547 - -1.1 130,547 - -1.3 130,547 - -0.7 130,547 - +0.7 130,547 - -1.1 130,547 - +0.6 130,598 + -0.4 130,598 + +0.6 130,598 + -2.3 130,598 + +0.5 130,598 + -1.0 130,608 + -1.6 130,608 + +0.5 130,608 + -0.6 130,608 + -1.7 130,608 + +0.2 130,608 + -1.1 130,608 + +0.2 130,608 + -0.5 130,608 + -1.4 130,608 + +0.5 130,608 + -1.6 130,608 + -1.3 130,608 + +0.9 130,609 - +0.5 130,992 + MPMX19_00118 0.33 -1.1 130,992 + MPMX19_00118 0.33 -0.1 130,992 + MPMX19_00118 0.33 -0.4 130,992 + MPMX19_00118 0.33 -0.3 130,992 + MPMX19_00118 0.33 -1.0 130,992 + MPMX19_00118 0.33 -0.5 130,992 + MPMX19_00118 0.33 -0.9 130,992 + MPMX19_00118 0.33 -1.3 131,046 + MPMX19_00118 0.38 +0.5 131,046 + MPMX19_00118 0.38 -1.0 131,046 + MPMX19_00118 0.38 +0.2 131,046 + MPMX19_00118 0.38 -0.3 131,124 + MPMX19_00118 0.46 -1.6 131,124 + MPMX19_00118 0.46 -0.3 131,124 + MPMX19_00118 0.46 +0.4 131,124 + MPMX19_00118 0.46 +0.4 131,124 + MPMX19_00118 0.46 +0.9 131,124 + MPMX19_00118 0.46 -0.1 131,124 + MPMX19_00118 0.46 +0.7 131,178 + MPMX19_00118 0.51 -2.3 131,178 + MPMX19_00118 0.51 +0.9 131,178 + MPMX19_00118 0.51 -1.7
Or see this region's nucleotide sequence