Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00115 and MPMX19_00116 are separated by 125 nucleotides MPMX19_00116 and MPMX19_00117 are separated by 115 nucleotides
MPMX19_00115: MPMX19_00115 - hypothetical protein, at 124,045 to 126,819
_00115
MPMX19_00116: MPMX19_00116 - Large-conductance mechanosensitive channel, at 126,945 to 127,418
_00116
MPMX19_00117: MPMX19_00117 - Protein translocase subunit SecA, at 127,534 to 130,269
_00117
Position (kb)
126
127
128 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 126.020 kb on + strand, within MPMX19_00115 at 126.020 kb on + strand, within MPMX19_00115 at 126.020 kb on + strand, within MPMX19_00115 at 126.021 kb on - strand, within MPMX19_00115 at 126.021 kb on - strand, within MPMX19_00115 at 126.035 kb on + strand, within MPMX19_00115 at 126.035 kb on + strand, within MPMX19_00115 at 126.036 kb on - strand, within MPMX19_00115 at 126.036 kb on - strand, within MPMX19_00115 at 126.036 kb on - strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.071 kb on + strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.072 kb on - strand, within MPMX19_00115 at 126.074 kb on + strand, within MPMX19_00115 at 126.074 kb on + strand, within MPMX19_00115 at 126.075 kb on - strand, within MPMX19_00115 at 126.198 kb on + strand, within MPMX19_00115 at 126.305 kb on + strand, within MPMX19_00115 at 126.305 kb on + strand, within MPMX19_00115 at 126.305 kb on + strand, within MPMX19_00115 at 126.305 kb on + strand, within MPMX19_00115 at 126.306 kb on - strand, within MPMX19_00115 at 126.306 kb on - strand, within MPMX19_00115 at 126.306 kb on - strand, within MPMX19_00115 at 126.306 kb on - strand, within MPMX19_00115 at 126.306 kb on - strand, within MPMX19_00115 at 126.306 kb on - strand, within MPMX19_00115 at 126.306 kb on - strand, within MPMX19_00115 at 126.323 kb on + strand, within MPMX19_00115 at 126.323 kb on + strand, within MPMX19_00115 at 126.323 kb on + strand, within MPMX19_00115 at 126.323 kb on + strand, within MPMX19_00115 at 126.324 kb on - strand, within MPMX19_00115 at 126.324 kb on - strand, within MPMX19_00115 at 126.512 kb on + strand, within MPMX19_00115 at 126.512 kb on + strand, within MPMX19_00115 at 126.512 kb on + strand, within MPMX19_00115 at 126.512 kb on + strand, within MPMX19_00115 at 126.512 kb on + strand, within MPMX19_00115 at 126.512 kb on + strand, within MPMX19_00115 at 126.513 kb on - strand, within MPMX19_00115 at 126.513 kb on - strand, within MPMX19_00115 at 126.513 kb on - strand, within MPMX19_00115 at 126.513 kb on - strand, within MPMX19_00115 at 126.513 kb on - strand, within MPMX19_00115 at 126.513 kb on - strand, within MPMX19_00115 at 126.513 kb on - strand, within MPMX19_00115 at 126.521 kb on + strand, within MPMX19_00115 at 126.521 kb on + strand, within MPMX19_00115 at 126.521 kb on + strand, within MPMX19_00115 at 126.521 kb on + strand, within MPMX19_00115 at 126.521 kb on + strand, within MPMX19_00115 at 126.522 kb on - strand, within MPMX19_00115 at 126.843 kb on - strand at 126.843 kb on - strand at 126.843 kb on - strand at 126.843 kb on - strand at 126.855 kb on - strand at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.180 kb on + strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.181 kb on - strand, within MPMX19_00116 at 127.228 kb on + strand, within MPMX19_00116 at 127.229 kb on - strand, within MPMX19_00116 at 127.229 kb on - strand, within MPMX19_00116 at 127.229 kb on - strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.255 kb on + strand, within MPMX19_00116 at 127.256 kb on - strand, within MPMX19_00116 at 127.256 kb on - strand, within MPMX19_00116 at 127.478 kb on - strand at 127.478 kb on - strand at 127.478 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 126,020 + MPMX19_00115 0.71 -0.3 126,020 + MPMX19_00115 0.71 -0.1 126,020 + MPMX19_00115 0.71 +0.7 126,021 - MPMX19_00115 0.71 -0.6 126,021 - MPMX19_00115 0.71 -0.3 126,035 + MPMX19_00115 0.72 +0.2 126,035 + MPMX19_00115 0.72 -1.0 126,036 - MPMX19_00115 0.72 +0.6 126,036 - MPMX19_00115 0.72 -0.7 126,036 - MPMX19_00115 0.72 +0.4 126,071 + MPMX19_00115 0.73 +1.3 126,071 + MPMX19_00115 0.73 -1.6 126,071 + MPMX19_00115 0.73 +0.2 126,071 + MPMX19_00115 0.73 -0.3 126,071 + MPMX19_00115 0.73 -1.0 126,071 + MPMX19_00115 0.73 +0.3 126,071 + MPMX19_00115 0.73 +0.8 126,071 + MPMX19_00115 0.73 +0.4 126,071 + MPMX19_00115 0.73 +0.6 126,071 + MPMX19_00115 0.73 -0.9 126,071 + MPMX19_00115 0.73 -0.3 126,071 + MPMX19_00115 0.73 +0.6 126,071 + MPMX19_00115 0.73 -1.0 126,071 + MPMX19_00115 0.73 -0.7 126,071 + MPMX19_00115 0.73 -1.3 126,071 + MPMX19_00115 0.73 -1.7 126,071 + MPMX19_00115 0.73 +0.3 126,071 + MPMX19_00115 0.73 +0.1 126,071 + MPMX19_00115 0.73 -0.3 126,071 + MPMX19_00115 0.73 -0.1 126,071 + MPMX19_00115 0.73 -0.4 126,071 + MPMX19_00115 0.73 -2.2 126,071 + MPMX19_00115 0.73 -1.7 126,071 + MPMX19_00115 0.73 -0.1 126,071 + MPMX19_00115 0.73 +0.5 126,071 + MPMX19_00115 0.73 -2.1 126,071 + MPMX19_00115 0.73 -0.3 126,071 + MPMX19_00115 0.73 -0.3 126,071 + MPMX19_00115 0.73 -0.7 126,071 + MPMX19_00115 0.73 -1.3 126,071 + MPMX19_00115 0.73 -0.3 126,071 + MPMX19_00115 0.73 -0.1 126,071 + MPMX19_00115 0.73 +0.4 126,071 + MPMX19_00115 0.73 +0.5 126,071 + MPMX19_00115 0.73 -0.1 126,071 + MPMX19_00115 0.73 -1.8 126,071 + MPMX19_00115 0.73 -0.3 126,071 + MPMX19_00115 0.73 -0.5 126,071 + MPMX19_00115 0.73 -0.6 126,071 + MPMX19_00115 0.73 -0.0 126,071 + MPMX19_00115 0.73 +1.3 126,071 + MPMX19_00115 0.73 -0.4 126,072 - MPMX19_00115 0.73 -0.6 126,072 - MPMX19_00115 0.73 +0.0 126,072 - MPMX19_00115 0.73 +1.7 126,072 - MPMX19_00115 0.73 -1.5 126,072 - MPMX19_00115 0.73 -0.4 126,072 - MPMX19_00115 0.73 -0.2 126,072 - MPMX19_00115 0.73 -2.5 126,072 - MPMX19_00115 0.73 -1.8 126,072 - MPMX19_00115 0.73 +1.3 126,072 - MPMX19_00115 0.73 -1.2 126,072 - MPMX19_00115 0.73 -0.3 126,072 - MPMX19_00115 0.73 -1.9 126,072 - MPMX19_00115 0.73 +0.4 126,072 - MPMX19_00115 0.73 -1.4 126,072 - MPMX19_00115 0.73 +0.2 126,072 - MPMX19_00115 0.73 -2.2 126,072 - MPMX19_00115 0.73 +0.7 126,072 - MPMX19_00115 0.73 -1.5 126,072 - MPMX19_00115 0.73 -1.6 126,072 - MPMX19_00115 0.73 -1.4 126,072 - MPMX19_00115 0.73 +0.1 126,072 - MPMX19_00115 0.73 +2.7 126,072 - MPMX19_00115 0.73 -0.1 126,072 - MPMX19_00115 0.73 -0.6 126,072 - MPMX19_00115 0.73 -3.1 126,072 - MPMX19_00115 0.73 -0.4 126,072 - MPMX19_00115 0.73 -0.7 126,072 - MPMX19_00115 0.73 -1.9 126,072 - MPMX19_00115 0.73 -0.1 126,072 - MPMX19_00115 0.73 +0.7 126,072 - MPMX19_00115 0.73 -1.6 126,074 + MPMX19_00115 0.73 -1.2 126,074 + MPMX19_00115 0.73 -1.6 126,075 - MPMX19_00115 0.73 +0.2 126,198 + MPMX19_00115 0.78 -2.0 126,305 + MPMX19_00115 0.81 -1.7 126,305 + MPMX19_00115 0.81 -0.5 126,305 + MPMX19_00115 0.81 -0.8 126,305 + MPMX19_00115 0.81 +0.2 126,306 - MPMX19_00115 0.81 +1.7 126,306 - MPMX19_00115 0.81 -1.0 126,306 - MPMX19_00115 0.81 -0.3 126,306 - MPMX19_00115 0.81 -0.3 126,306 - MPMX19_00115 0.81 -0.7 126,306 - MPMX19_00115 0.81 -0.7 126,306 - MPMX19_00115 0.81 +0.5 126,323 + MPMX19_00115 0.82 -0.3 126,323 + MPMX19_00115 0.82 -0.0 126,323 + MPMX19_00115 0.82 -1.4 126,323 + MPMX19_00115 0.82 +0.3 126,324 - MPMX19_00115 0.82 -0.8 126,324 - MPMX19_00115 0.82 -0.1 126,512 + MPMX19_00115 0.89 -0.4 126,512 + MPMX19_00115 0.89 -0.3 126,512 + MPMX19_00115 0.89 -1.3 126,512 + MPMX19_00115 0.89 -0.3 126,512 + MPMX19_00115 0.89 -0.5 126,512 + MPMX19_00115 0.89 -0.3 126,513 - MPMX19_00115 0.89 -0.6 126,513 - MPMX19_00115 0.89 -0.6 126,513 - MPMX19_00115 0.89 -0.3 126,513 - MPMX19_00115 0.89 -0.7 126,513 - MPMX19_00115 0.89 -0.2 126,513 - MPMX19_00115 0.89 -0.7 126,513 - MPMX19_00115 0.89 -0.1 126,521 + MPMX19_00115 0.89 +0.4 126,521 + MPMX19_00115 0.89 -1.3 126,521 + MPMX19_00115 0.89 -1.0 126,521 + MPMX19_00115 0.89 +0.0 126,521 + MPMX19_00115 0.89 -1.3 126,522 - MPMX19_00115 0.89 -1.4 126,843 - +1.3 126,843 - +0.7 126,843 - -0.1 126,843 - +0.2 126,855 - -0.8 127,180 + MPMX19_00116 0.50 -0.0 127,180 + MPMX19_00116 0.50 +1.7 127,180 + MPMX19_00116 0.50 +1.5 127,180 + MPMX19_00116 0.50 +0.4 127,180 + MPMX19_00116 0.50 +0.2 127,180 + MPMX19_00116 0.50 +0.0 127,180 + MPMX19_00116 0.50 -0.4 127,180 + MPMX19_00116 0.50 +0.7 127,181 - MPMX19_00116 0.50 +1.3 127,181 - MPMX19_00116 0.50 +0.6 127,181 - MPMX19_00116 0.50 -0.3 127,181 - MPMX19_00116 0.50 -2.4 127,181 - MPMX19_00116 0.50 +0.1 127,181 - MPMX19_00116 0.50 -2.4 127,228 + MPMX19_00116 0.60 -0.5 127,229 - MPMX19_00116 0.60 -2.0 127,229 - MPMX19_00116 0.60 +0.5 127,229 - MPMX19_00116 0.60 +0.2 127,255 + MPMX19_00116 0.65 -0.1 127,255 + MPMX19_00116 0.65 +0.2 127,255 + MPMX19_00116 0.65 -1.8 127,255 + MPMX19_00116 0.65 -1.3 127,255 + MPMX19_00116 0.65 -0.3 127,256 - MPMX19_00116 0.66 -0.5 127,256 - MPMX19_00116 0.66 +0.0 127,478 - -0.2 127,478 - +0.1 127,478 - -1.2
Or see this region's nucleotide sequence