Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00036 and MPMX19_00037 overlap by 4 nucleotides MPMX19_00037 and MPMX19_00038 are separated by 170 nucleotides MPMX19_00038 and MPMX19_00039 are separated by 402 nucleotides
MPMX19_00036: MPMX19_00036 - hypothetical protein, at 40,232 to 40,786
_00036
MPMX19_00037: MPMX19_00037 - hypothetical protein, at 40,783 to 41,232
_00037
MPMX19_00038: MPMX19_00038 - Transcriptional regulator SlyA, at 41,403 to 41,909
_00038
MPMX19_00039: MPMX19_00039 - Fumarylpyruvate hydrolase, at 42,312 to 42,995
_00039
Position (kb) 41
42 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 40.438 kb on + strand, within MPMX19_00036 at 40.438 kb on + strand, within MPMX19_00036 at 40.439 kb on - strand, within MPMX19_00036 at 40.782 kb on + strand at 40.782 kb on + strand at 40.782 kb on + strand at 40.782 kb on + strand at 40.782 kb on + strand at 40.782 kb on + strand at 40.782 kb on + strand at 40.783 kb on - strand at 40.783 kb on - strand at 40.783 kb on - strand at 40.783 kb on - strand at 40.783 kb on - strand at 40.783 kb on - strand at 40.959 kb on + strand, within MPMX19_00037 at 40.959 kb on + strand, within MPMX19_00037 at 40.960 kb on - strand, within MPMX19_00037 at 40.960 kb on - strand, within MPMX19_00037 at 40.979 kb on + strand, within MPMX19_00037 at 40.979 kb on + strand, within MPMX19_00037 at 40.979 kb on + strand, within MPMX19_00037 at 40.979 kb on + strand, within MPMX19_00037 at 40.979 kb on + strand, within MPMX19_00037 at 40.980 kb on - strand, within MPMX19_00037 at 40.980 kb on - strand, within MPMX19_00037 at 40.980 kb on - strand, within MPMX19_00037 at 41.016 kb on + strand, within MPMX19_00037 at 41.016 kb on + strand, within MPMX19_00037 at 41.065 kb on + strand, within MPMX19_00037 at 41.065 kb on + strand, within MPMX19_00037 at 41.065 kb on + strand, within MPMX19_00037 at 41.065 kb on + strand, within MPMX19_00037 at 41.066 kb on - strand, within MPMX19_00037 at 41.066 kb on - strand, within MPMX19_00037 at 41.066 kb on - strand, within MPMX19_00037 at 41.086 kb on - strand, within MPMX19_00037 at 41.103 kb on + strand, within MPMX19_00037 at 41.104 kb on - strand, within MPMX19_00037 at 41.104 kb on - strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.137 kb on + strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.138 kb on - strand, within MPMX19_00037 at 41.153 kb on + strand, within MPMX19_00037 at 41.153 kb on + strand, within MPMX19_00037 at 41.170 kb on + strand, within MPMX19_00037 at 41.170 kb on + strand, within MPMX19_00037 at 41.171 kb on - strand, within MPMX19_00037 at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.287 kb on + strand at 41.288 kb on - strand at 41.288 kb on - strand at 41.288 kb on - strand at 41.288 kb on - strand at 41.288 kb on - strand at 41.314 kb on + strand at 41.314 kb on + strand at 41.314 kb on + strand at 41.314 kb on + strand at 41.314 kb on + strand at 41.314 kb on + strand at 41.315 kb on - strand at 41.315 kb on - strand at 41.315 kb on - strand at 41.315 kb on - strand at 41.315 kb on - strand at 41.315 kb on - strand at 41.315 kb on - strand at 41.404 kb on + strand at 41.404 kb on + strand at 41.404 kb on + strand at 41.404 kb on + strand at 41.404 kb on + strand at 41.404 kb on + strand at 41.404 kb on + strand at 41.405 kb on - strand at 41.405 kb on - strand at 41.939 kb on - strand at 41.939 kb on - strand at 41.987 kb on - strand at 42.274 kb on + strand at 42.274 kb on + strand at 42.275 kb on - strand at 42.275 kb on - strand at 42.275 kb on - strand at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.386 kb on + strand, within MPMX19_00039 at 42.387 kb on - strand, within MPMX19_00039 at 42.387 kb on - strand, within MPMX19_00039 at 42.387 kb on - strand, within MPMX19_00039 at 42.387 kb on - strand, within MPMX19_00039 at 42.387 kb on - strand, within MPMX19_00039 at 42.387 kb on - strand, within MPMX19_00039 at 42.387 kb on - strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.390 kb on + strand, within MPMX19_00039 at 42.391 kb on - strand, within MPMX19_00039 at 42.391 kb on - strand, within MPMX19_00039 at 42.391 kb on - strand, within MPMX19_00039 at 42.391 kb on - strand, within MPMX19_00039 at 42.391 kb on - strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.408 kb on + strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.409 kb on - strand, within MPMX19_00039 at 42.621 kb on + strand, within MPMX19_00039 at 42.638 kb on + strand, within MPMX19_00039 at 42.638 kb on + strand, within MPMX19_00039 at 42.638 kb on + strand, within MPMX19_00039 at 42.638 kb on + strand, within MPMX19_00039 at 42.638 kb on + strand, within MPMX19_00039 at 42.639 kb on - strand, within MPMX19_00039 at 42.639 kb on - strand, within MPMX19_00039 at 42.639 kb on - strand, within MPMX19_00039 at 42.639 kb on - strand, within MPMX19_00039 at 42.639 kb on - strand, within MPMX19_00039 at 42.639 kb on - strand, within MPMX19_00039 at 42.639 kb on - strand, within MPMX19_00039 at 42.855 kb on + strand, within MPMX19_00039 at 42.855 kb on + strand, within MPMX19_00039 at 42.855 kb on + strand, within MPMX19_00039 at 42.855 kb on + strand, within MPMX19_00039 at 42.855 kb on + strand, within MPMX19_00039 at 42.855 kb on + strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.856 kb on - strand, within MPMX19_00039 at 42.897 kb on + strand, within MPMX19_00039 at 42.897 kb on + strand, within MPMX19_00039 at 42.897 kb on + strand, within MPMX19_00039 at 42.897 kb on + strand, within MPMX19_00039 at 42.897 kb on + strand, within MPMX19_00039 at 42.897 kb on + strand, within MPMX19_00039 at 42.897 kb on + strand, within MPMX19_00039 at 42.898 kb on - strand, within MPMX19_00039 at 42.898 kb on - strand, within MPMX19_00039 at 42.898 kb on - strand, within MPMX19_00039 at 42.898 kb on - strand, within MPMX19_00039 at 42.898 kb on - strand, within MPMX19_00039
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 40,438 + MPMX19_00036 0.37 -1.6 40,438 + MPMX19_00036 0.37 -1.1 40,439 - MPMX19_00036 0.37 -0.3 40,782 + +0.4 40,782 + -0.5 40,782 + +1.2 40,782 + -0.6 40,782 + +1.3 40,782 + +0.4 40,782 + +0.4 40,783 - -0.3 40,783 - +0.2 40,783 - -0.5 40,783 - -0.8 40,783 - -0.6 40,783 - -0.8 40,959 + MPMX19_00037 0.39 -0.8 40,959 + MPMX19_00037 0.39 -0.8 40,960 - MPMX19_00037 0.39 -0.4 40,960 - MPMX19_00037 0.39 +0.7 40,979 + MPMX19_00037 0.44 -0.0 40,979 + MPMX19_00037 0.44 -1.1 40,979 + MPMX19_00037 0.44 -1.6 40,979 + MPMX19_00037 0.44 +0.5 40,979 + MPMX19_00037 0.44 -1.0 40,980 - MPMX19_00037 0.44 -0.4 40,980 - MPMX19_00037 0.44 -0.6 40,980 - MPMX19_00037 0.44 -0.1 41,016 + MPMX19_00037 0.52 +0.6 41,016 + MPMX19_00037 0.52 -1.4 41,065 + MPMX19_00037 0.63 -0.9 41,065 + MPMX19_00037 0.63 -0.6 41,065 + MPMX19_00037 0.63 -0.1 41,065 + MPMX19_00037 0.63 +0.4 41,066 - MPMX19_00037 0.63 -1.4 41,066 - MPMX19_00037 0.63 -1.6 41,066 - MPMX19_00037 0.63 -1.1 41,086 - MPMX19_00037 0.67 -0.2 41,103 + MPMX19_00037 0.71 +0.9 41,104 - MPMX19_00037 0.71 +0.2 41,104 - MPMX19_00037 0.71 -0.1 41,137 + MPMX19_00037 0.79 +0.2 41,137 + MPMX19_00037 0.79 -1.6 41,137 + MPMX19_00037 0.79 -0.9 41,137 + MPMX19_00037 0.79 -1.6 41,137 + MPMX19_00037 0.79 +0.4 41,137 + MPMX19_00037 0.79 -0.1 41,137 + MPMX19_00037 0.79 +0.0 41,137 + MPMX19_00037 0.79 -1.4 41,137 + MPMX19_00037 0.79 -0.3 41,137 + MPMX19_00037 0.79 +0.4 41,137 + MPMX19_00037 0.79 -0.2 41,137 + MPMX19_00037 0.79 -0.9 41,137 + MPMX19_00037 0.79 -3.0 41,137 + MPMX19_00037 0.79 -0.1 41,137 + MPMX19_00037 0.79 -0.7 41,137 + MPMX19_00037 0.79 -1.3 41,137 + MPMX19_00037 0.79 +0.2 41,138 - MPMX19_00037 0.79 -0.7 41,138 - MPMX19_00037 0.79 -0.6 41,138 - MPMX19_00037 0.79 -2.5 41,138 - MPMX19_00037 0.79 -1.0 41,138 - MPMX19_00037 0.79 -0.6 41,138 - MPMX19_00037 0.79 -0.6 41,138 - MPMX19_00037 0.79 -1.1 41,138 - MPMX19_00037 0.79 +0.6 41,138 - MPMX19_00037 0.79 -0.3 41,138 - MPMX19_00037 0.79 -0.4 41,138 - MPMX19_00037 0.79 -0.8 41,138 - MPMX19_00037 0.79 -1.7 41,153 + MPMX19_00037 0.82 -0.8 41,153 + MPMX19_00037 0.82 -0.7 41,170 + MPMX19_00037 0.86 -2.1 41,170 + MPMX19_00037 0.86 +0.5 41,171 - MPMX19_00037 0.86 -0.6 41,287 + -0.4 41,287 + -1.1 41,287 + -0.5 41,287 + +0.9 41,287 + -0.1 41,287 + -0.1 41,287 + -2.0 41,287 + -0.5 41,287 + -1.6 41,287 + +0.6 41,287 + -1.6 41,287 + +0.2 41,287 + +0.4 41,287 + -0.7 41,287 + +0.0 41,288 - +0.4 41,288 - -1.6 41,288 - -0.9 41,288 - -0.3 41,288 - -0.5 41,314 + -0.8 41,314 + -1.1 41,314 + +0.0 41,314 + +0.1 41,314 + +0.5 41,314 + -1.5 41,315 - -1.2 41,315 - +0.6 41,315 - -1.6 41,315 - -0.3 41,315 - +0.6 41,315 - -0.8 41,315 - -0.4 41,404 + +0.3 41,404 + -1.1 41,404 + -1.1 41,404 + +0.4 41,404 + -0.5 41,404 + +0.7 41,404 + -1.3 41,405 - -1.0 41,405 - -0.8 41,939 - -1.0 41,939 - -2.0 41,987 - -0.6 42,274 + -0.3 42,274 + +0.3 42,275 - -1.0 42,275 - -0.8 42,275 - -1.1 42,386 + MPMX19_00039 0.11 -1.6 42,386 + MPMX19_00039 0.11 +0.2 42,386 + MPMX19_00039 0.11 +0.3 42,386 + MPMX19_00039 0.11 -0.6 42,386 + MPMX19_00039 0.11 -0.1 42,386 + MPMX19_00039 0.11 +1.7 42,386 + MPMX19_00039 0.11 -0.5 42,386 + MPMX19_00039 0.11 +0.0 42,386 + MPMX19_00039 0.11 -0.1 42,386 + MPMX19_00039 0.11 +0.5 42,386 + MPMX19_00039 0.11 -1.6 42,386 + MPMX19_00039 0.11 -1.5 42,386 + MPMX19_00039 0.11 -0.7 42,387 - MPMX19_00039 0.11 -2.3 42,387 - MPMX19_00039 0.11 -1.6 42,387 - MPMX19_00039 0.11 +0.1 42,387 - MPMX19_00039 0.11 +0.3 42,387 - MPMX19_00039 0.11 -0.4 42,387 - MPMX19_00039 0.11 -1.1 42,387 - MPMX19_00039 0.11 -0.1 42,390 + MPMX19_00039 0.11 -0.9 42,390 + MPMX19_00039 0.11 -1.0 42,390 + MPMX19_00039 0.11 +0.7 42,390 + MPMX19_00039 0.11 -0.1 42,390 + MPMX19_00039 0.11 -1.0 42,390 + MPMX19_00039 0.11 -0.1 42,390 + MPMX19_00039 0.11 +0.4 42,390 + MPMX19_00039 0.11 -0.7 42,390 + MPMX19_00039 0.11 +0.2 42,390 + MPMX19_00039 0.11 +1.2 42,390 + MPMX19_00039 0.11 +0.7 42,390 + MPMX19_00039 0.11 -0.8 42,390 + MPMX19_00039 0.11 -1.6 42,390 + MPMX19_00039 0.11 -0.1 42,390 + MPMX19_00039 0.11 -0.8 42,390 + MPMX19_00039 0.11 -0.4 42,391 - MPMX19_00039 0.12 -1.2 42,391 - MPMX19_00039 0.12 -0.8 42,391 - MPMX19_00039 0.12 -0.1 42,391 - MPMX19_00039 0.12 -1.4 42,391 - MPMX19_00039 0.12 -2.3 42,408 + MPMX19_00039 0.14 +0.1 42,408 + MPMX19_00039 0.14 +0.2 42,408 + MPMX19_00039 0.14 -0.9 42,408 + MPMX19_00039 0.14 -0.3 42,408 + MPMX19_00039 0.14 +0.0 42,408 + MPMX19_00039 0.14 +2.0 42,408 + MPMX19_00039 0.14 -0.8 42,408 + MPMX19_00039 0.14 -0.3 42,408 + MPMX19_00039 0.14 -1.1 42,408 + MPMX19_00039 0.14 +1.5 42,408 + MPMX19_00039 0.14 -0.3 42,409 - MPMX19_00039 0.14 +0.3 42,409 - MPMX19_00039 0.14 -0.6 42,409 - MPMX19_00039 0.14 -0.3 42,409 - MPMX19_00039 0.14 -0.4 42,409 - MPMX19_00039 0.14 -1.8 42,409 - MPMX19_00039 0.14 -1.2 42,409 - MPMX19_00039 0.14 -1.0 42,409 - MPMX19_00039 0.14 +0.2 42,409 - MPMX19_00039 0.14 +0.2 42,409 - MPMX19_00039 0.14 -0.4 42,409 - MPMX19_00039 0.14 -1.1 42,409 - MPMX19_00039 0.14 -1.4 42,409 - MPMX19_00039 0.14 -0.8 42,409 - MPMX19_00039 0.14 -0.2 42,621 + MPMX19_00039 0.45 -0.8 42,638 + MPMX19_00039 0.48 +0.2 42,638 + MPMX19_00039 0.48 -1.6 42,638 + MPMX19_00039 0.48 -1.1 42,638 + MPMX19_00039 0.48 -1.0 42,638 + MPMX19_00039 0.48 -0.6 42,639 - MPMX19_00039 0.48 +0.4 42,639 - MPMX19_00039 0.48 +0.5 42,639 - MPMX19_00039 0.48 +1.4 42,639 - MPMX19_00039 0.48 -0.5 42,639 - MPMX19_00039 0.48 -2.0 42,639 - MPMX19_00039 0.48 -0.4 42,639 - MPMX19_00039 0.48 -0.5 42,855 + MPMX19_00039 0.79 -1.1 42,855 + MPMX19_00039 0.79 -1.4 42,855 + MPMX19_00039 0.79 +0.2 42,855 + MPMX19_00039 0.79 -1.7 42,855 + MPMX19_00039 0.79 -0.7 42,855 + MPMX19_00039 0.79 -0.3 42,856 - MPMX19_00039 0.80 -0.4 42,856 - MPMX19_00039 0.80 +0.4 42,856 - MPMX19_00039 0.80 -0.2 42,856 - MPMX19_00039 0.80 +0.5 42,856 - MPMX19_00039 0.80 -0.7 42,856 - MPMX19_00039 0.80 +2.3 42,856 - MPMX19_00039 0.80 -1.1 42,856 - MPMX19_00039 0.80 -0.8 42,856 - MPMX19_00039 0.80 -2.0 42,856 - MPMX19_00039 0.80 -1.4 42,856 - MPMX19_00039 0.80 -2.2 42,856 - MPMX19_00039 0.80 +0.7 42,856 - MPMX19_00039 0.80 -0.8 42,856 - MPMX19_00039 0.80 -1.3 42,856 - MPMX19_00039 0.80 -1.8 42,897 + MPMX19_00039 0.86 +1.1 42,897 + MPMX19_00039 0.86 +1.2 42,897 + MPMX19_00039 0.86 +0.2 42,897 + MPMX19_00039 0.86 -0.8 42,897 + MPMX19_00039 0.86 -0.8 42,897 + MPMX19_00039 0.86 +0.8 42,897 + MPMX19_00039 0.86 +0.3 42,898 - MPMX19_00039 0.86 -0.5 42,898 - MPMX19_00039 0.86 +0.4 42,898 - MPMX19_00039 0.86 +0.5 42,898 - MPMX19_00039 0.86 -0.7 42,898 - MPMX19_00039 0.86 -0.8
Or see this region's nucleotide sequence