Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00017 and MPMX19_00018 are separated by 6 nucleotides MPMX19_00018 and MPMX19_00019 are separated by 105 nucleotides MPMX19_00019 and MPMX19_00020 are separated by 76 nucleotides MPMX19_00020 and MPMX19_00021 are separated by 112 nucleotides
MPMX19_00017: MPMX19_00017 - Beta-barrel assembly-enhancing protease, at 22,182 to 23,840
_00017
MPMX19_00018: MPMX19_00018 - hypothetical protein, at 23,847 to 25,160
_00018
MPMX19_00019: MPMX19_00019 - hypothetical protein, at 25,266 to 25,532
_00019
MPMX19_00020: MPMX19_00020 - hypothetical protein, at 25,609 to 25,728
_00020
MPMX19_00021: MPMX19_00021 - hypothetical protein, at 25,841 to 26,521
_00021
Position (kb) 23
24
25
26 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 22.938 kb on + strand, within MPMX19_00017 at 22.938 kb on + strand, within MPMX19_00017 at 22.938 kb on + strand, within MPMX19_00017 at 22.938 kb on + strand, within MPMX19_00017 at 22.938 kb on + strand, within MPMX19_00017 at 22.938 kb on + strand, within MPMX19_00017 at 22.938 kb on + strand, within MPMX19_00017 at 22.938 kb on + strand, within MPMX19_00017 at 22.938 kb on + strand, within MPMX19_00017 at 22.938 kb on + strand, within MPMX19_00017 at 22.939 kb on - strand, within MPMX19_00017 at 22.939 kb on - strand, within MPMX19_00017 at 22.939 kb on - strand, within MPMX19_00017 at 22.939 kb on - strand, within MPMX19_00017 at 22.939 kb on - strand, within MPMX19_00017 at 22.939 kb on - strand, within MPMX19_00017 at 22.939 kb on - strand, within MPMX19_00017 at 22.939 kb on - strand, within MPMX19_00017 at 22.939 kb on - strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.001 kb on + strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.002 kb on - strand, within MPMX19_00017 at 23.175 kb on + strand, within MPMX19_00017 at 23.176 kb on - strand, within MPMX19_00017 at 23.176 kb on - strand, within MPMX19_00017 at 23.282 kb on + strand, within MPMX19_00017 at 23.282 kb on + strand, within MPMX19_00017 at 23.282 kb on + strand, within MPMX19_00017 at 23.283 kb on - strand, within MPMX19_00017 at 23.382 kb on + strand, within MPMX19_00017 at 23.382 kb on + strand, within MPMX19_00017 at 23.382 kb on + strand, within MPMX19_00017 at 23.382 kb on + strand, within MPMX19_00017 at 23.383 kb on - strand, within MPMX19_00017 at 23.383 kb on - strand, within MPMX19_00017 at 23.484 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.673 kb on + strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.674 kb on - strand, within MPMX19_00017 at 23.781 kb on + strand at 23.781 kb on + strand at 23.838 kb on + strand at 23.838 kb on + strand at 23.838 kb on + strand at 23.838 kb on + strand at 23.838 kb on + strand at 23.839 kb on - strand at 23.839 kb on - strand at 23.925 kb on + strand at 23.925 kb on + strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.946 kb on + strand at 23.946 kb on + strand at 23.946 kb on + strand at 23.946 kb on + strand at 23.946 kb on + strand at 23.947 kb on - strand at 23.947 kb on - strand at 23.947 kb on - strand at 23.947 kb on - strand at 23.947 kb on - strand at 23.947 kb on - strand at 23.982 kb on + strand, within MPMX19_00018 at 23.982 kb on + strand, within MPMX19_00018 at 23.982 kb on + strand, within MPMX19_00018 at 23.982 kb on + strand, within MPMX19_00018 at 23.982 kb on + strand, within MPMX19_00018 at 23.982 kb on + strand, within MPMX19_00018 at 23.982 kb on + strand, within MPMX19_00018 at 23.982 kb on + strand, within MPMX19_00018 at 23.983 kb on - strand, within MPMX19_00018 at 24.261 kb on + strand, within MPMX19_00018 at 24.261 kb on + strand, within MPMX19_00018 at 24.261 kb on + strand, within MPMX19_00018 at 24.261 kb on + strand, within MPMX19_00018 at 24.261 kb on + strand, within MPMX19_00018 at 24.261 kb on + strand, within MPMX19_00018 at 24.261 kb on + strand, within MPMX19_00018 at 24.261 kb on + strand, within MPMX19_00018 at 24.261 kb on + strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.262 kb on - strand, within MPMX19_00018 at 24.336 kb on + strand, within MPMX19_00018 at 24.336 kb on + strand, within MPMX19_00018 at 24.336 kb on + strand, within MPMX19_00018 at 24.337 kb on - strand, within MPMX19_00018 at 24.337 kb on - strand, within MPMX19_00018 at 24.337 kb on - strand, within MPMX19_00018 at 24.483 kb on + strand, within MPMX19_00018 at 24.484 kb on - strand, within MPMX19_00018 at 24.504 kb on + strand, within MPMX19_00018 at 24.504 kb on + strand, within MPMX19_00018 at 24.504 kb on + strand, within MPMX19_00018 at 24.504 kb on + strand, within MPMX19_00018 at 24.504 kb on + strand, within MPMX19_00018 at 24.505 kb on - strand, within MPMX19_00018 at 24.505 kb on - strand, within MPMX19_00018 at 24.648 kb on + strand, within MPMX19_00018 at 24.648 kb on + strand, within MPMX19_00018 at 24.649 kb on - strand, within MPMX19_00018 at 24.649 kb on - strand, within MPMX19_00018 at 24.730 kb on + strand, within MPMX19_00018 at 25.002 kb on + strand, within MPMX19_00018 at 25.002 kb on + strand, within MPMX19_00018 at 25.003 kb on - strand, within MPMX19_00018 at 25.130 kb on + strand at 25.130 kb on + strand at 25.130 kb on + strand at 25.130 kb on + strand at 25.130 kb on + strand at 25.130 kb on + strand at 25.130 kb on + strand at 25.130 kb on + strand at 25.130 kb on + strand at 25.130 kb on + strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.131 kb on - strand at 25.158 kb on + strand at 25.214 kb on + strand at 25.214 kb on + strand at 25.214 kb on + strand at 25.214 kb on + strand at 25.214 kb on + strand at 25.215 kb on - strand at 25.215 kb on - strand at 25.215 kb on - strand at 25.215 kb on - strand at 25.215 kb on - strand at 25.259 kb on - strand at 25.350 kb on - strand, within MPMX19_00019 at 25.597 kb on + strand at 25.597 kb on + strand at 25.598 kb on - strand at 25.598 kb on - strand at 25.682 kb on + strand, within MPMX19_00020 at 25.683 kb on - strand, within MPMX19_00020 at 25.683 kb on - strand, within MPMX19_00020 at 25.683 kb on - strand, within MPMX19_00020 at 25.802 kb on + strand at 25.803 kb on - strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.858 kb on + strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 25.859 kb on - strand at 26.049 kb on - strand, within MPMX19_00021 at 26.049 kb on - strand, within MPMX19_00021 at 26.049 kb on - strand, within MPMX19_00021 at 26.049 kb on - strand, within MPMX19_00021 at 26.052 kb on - strand, within MPMX19_00021 at 26.052 kb on - strand, within MPMX19_00021 at 26.052 kb on - strand, within MPMX19_00021 at 26.052 kb on - strand, within MPMX19_00021
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 22,938 + MPMX19_00017 0.46 +0.7 22,938 + MPMX19_00017 0.46 -0.3 22,938 + MPMX19_00017 0.46 +0.9 22,938 + MPMX19_00017 0.46 +1.5 22,938 + MPMX19_00017 0.46 -0.4 22,938 + MPMX19_00017 0.46 -0.2 22,938 + MPMX19_00017 0.46 +0.9 22,938 + MPMX19_00017 0.46 -0.6 22,938 + MPMX19_00017 0.46 +0.5 22,938 + MPMX19_00017 0.46 -0.2 22,939 - MPMX19_00017 0.46 -1.8 22,939 - MPMX19_00017 0.46 +0.7 22,939 - MPMX19_00017 0.46 -1.2 22,939 - MPMX19_00017 0.46 +1.5 22,939 - MPMX19_00017 0.46 -0.2 22,939 - MPMX19_00017 0.46 +0.1 22,939 - MPMX19_00017 0.46 -0.4 22,939 - MPMX19_00017 0.46 -0.6 22,939 - MPMX19_00017 0.46 -0.6 23,001 + MPMX19_00017 0.49 -1.1 23,001 + MPMX19_00017 0.49 -0.2 23,001 + MPMX19_00017 0.49 -2.6 23,001 + MPMX19_00017 0.49 -0.1 23,001 + MPMX19_00017 0.49 -1.7 23,001 + MPMX19_00017 0.49 -1.1 23,001 + MPMX19_00017 0.49 -0.3 23,001 + MPMX19_00017 0.49 -1.5 23,001 + MPMX19_00017 0.49 -0.8 23,001 + MPMX19_00017 0.49 -0.3 23,001 + MPMX19_00017 0.49 -0.1 23,001 + MPMX19_00017 0.49 +1.2 23,001 + MPMX19_00017 0.49 -1.0 23,001 + MPMX19_00017 0.49 -1.4 23,001 + MPMX19_00017 0.49 +1.2 23,001 + MPMX19_00017 0.49 -0.6 23,001 + MPMX19_00017 0.49 -0.3 23,001 + MPMX19_00017 0.49 +0.0 23,002 - MPMX19_00017 0.49 -0.2 23,002 - MPMX19_00017 0.49 -1.3 23,002 - MPMX19_00017 0.49 +1.2 23,002 - MPMX19_00017 0.49 +0.4 23,002 - MPMX19_00017 0.49 -1.6 23,002 - MPMX19_00017 0.49 +0.1 23,002 - MPMX19_00017 0.49 +0.0 23,002 - MPMX19_00017 0.49 +0.3 23,002 - MPMX19_00017 0.49 +0.0 23,002 - MPMX19_00017 0.49 -1.1 23,175 + MPMX19_00017 0.60 +0.2 23,176 - MPMX19_00017 0.60 +0.6 23,176 - MPMX19_00017 0.60 +0.9 23,282 + MPMX19_00017 0.66 -1.1 23,282 + MPMX19_00017 0.66 +0.1 23,282 + MPMX19_00017 0.66 -0.3 23,283 - MPMX19_00017 0.66 +0.2 23,382 + MPMX19_00017 0.72 +0.0 23,382 + MPMX19_00017 0.72 -1.2 23,382 + MPMX19_00017 0.72 -0.1 23,382 + MPMX19_00017 0.72 -1.8 23,383 - MPMX19_00017 0.72 -0.0 23,383 - MPMX19_00017 0.72 -0.8 23,484 + MPMX19_00017 0.78 +0.2 23,673 + MPMX19_00017 0.90 -1.1 23,673 + MPMX19_00017 0.90 +0.8 23,673 + MPMX19_00017 0.90 +0.9 23,673 + MPMX19_00017 0.90 -0.1 23,673 + MPMX19_00017 0.90 -1.1 23,673 + MPMX19_00017 0.90 +1.3 23,673 + MPMX19_00017 0.90 -1.6 23,673 + MPMX19_00017 0.90 -1.0 23,673 + MPMX19_00017 0.90 +0.0 23,673 + MPMX19_00017 0.90 -1.2 23,673 + MPMX19_00017 0.90 +0.3 23,673 + MPMX19_00017 0.90 +0.0 23,673 + MPMX19_00017 0.90 +0.2 23,673 + MPMX19_00017 0.90 -0.4 23,673 + MPMX19_00017 0.90 -0.7 23,673 + MPMX19_00017 0.90 -1.4 23,673 + MPMX19_00017 0.90 -1.4 23,673 + MPMX19_00017 0.90 -1.3 23,673 + MPMX19_00017 0.90 +1.3 23,673 + MPMX19_00017 0.90 +0.3 23,673 + MPMX19_00017 0.90 -0.1 23,673 + MPMX19_00017 0.90 +0.3 23,673 + MPMX19_00017 0.90 -1.4 23,673 + MPMX19_00017 0.90 -0.3 23,674 - MPMX19_00017 0.90 +1.3 23,674 - MPMX19_00017 0.90 -1.6 23,674 - MPMX19_00017 0.90 +0.2 23,674 - MPMX19_00017 0.90 +0.7 23,674 - MPMX19_00017 0.90 -1.3 23,674 - MPMX19_00017 0.90 -0.6 23,674 - MPMX19_00017 0.90 -0.5 23,674 - MPMX19_00017 0.90 -0.1 23,674 - MPMX19_00017 0.90 +1.2 23,674 - MPMX19_00017 0.90 -0.4 23,674 - MPMX19_00017 0.90 -0.3 23,781 + +0.2 23,781 + -1.6 23,838 + -1.8 23,838 + -0.4 23,838 + +0.7 23,838 + +0.2 23,838 + +1.0 23,839 - +1.2 23,839 - -0.3 23,925 + +0.3 23,925 + -0.8 23,926 - -1.3 23,926 - -0.6 23,926 - -0.6 23,926 - +0.5 23,926 - -1.2 23,926 - -1.6 23,946 + -1.6 23,946 + -1.1 23,946 + -0.2 23,946 + -3.1 23,946 + +0.4 23,947 - -1.1 23,947 - -1.7 23,947 - -1.1 23,947 - -0.3 23,947 - -0.3 23,947 - -0.8 23,982 + MPMX19_00018 0.10 +1.0 23,982 + MPMX19_00018 0.10 -3.4 23,982 + MPMX19_00018 0.10 -1.3 23,982 + MPMX19_00018 0.10 -0.8 23,982 + MPMX19_00018 0.10 -0.3 23,982 + MPMX19_00018 0.10 +0.7 23,982 + MPMX19_00018 0.10 -0.1 23,982 + MPMX19_00018 0.10 +0.2 23,983 - MPMX19_00018 0.10 +0.6 24,261 + MPMX19_00018 0.32 +0.3 24,261 + MPMX19_00018 0.32 -0.8 24,261 + MPMX19_00018 0.32 +1.5 24,261 + MPMX19_00018 0.32 +0.2 24,261 + MPMX19_00018 0.32 +0.6 24,261 + MPMX19_00018 0.32 -1.3 24,261 + MPMX19_00018 0.32 +1.7 24,261 + MPMX19_00018 0.32 +0.9 24,261 + MPMX19_00018 0.32 -0.5 24,262 - MPMX19_00018 0.32 -0.6 24,262 - MPMX19_00018 0.32 -0.8 24,262 - MPMX19_00018 0.32 -0.5 24,262 - MPMX19_00018 0.32 -0.9 24,262 - MPMX19_00018 0.32 -1.2 24,262 - MPMX19_00018 0.32 +0.2 24,262 - MPMX19_00018 0.32 +0.9 24,262 - MPMX19_00018 0.32 -0.3 24,262 - MPMX19_00018 0.32 +0.7 24,262 - MPMX19_00018 0.32 -1.5 24,262 - MPMX19_00018 0.32 +0.7 24,262 - MPMX19_00018 0.32 +0.3 24,336 + MPMX19_00018 0.37 +0.6 24,336 + MPMX19_00018 0.37 -0.8 24,336 + MPMX19_00018 0.37 -0.7 24,337 - MPMX19_00018 0.37 +0.0 24,337 - MPMX19_00018 0.37 +0.5 24,337 - MPMX19_00018 0.37 -0.5 24,483 + MPMX19_00018 0.48 -1.3 24,484 - MPMX19_00018 0.48 -1.3 24,504 + MPMX19_00018 0.50 -0.6 24,504 + MPMX19_00018 0.50 +0.2 24,504 + MPMX19_00018 0.50 -0.6 24,504 + MPMX19_00018 0.50 -1.5 24,504 + MPMX19_00018 0.50 +0.9 24,505 - MPMX19_00018 0.50 -0.3 24,505 - MPMX19_00018 0.50 +0.7 24,648 + MPMX19_00018 0.61 +0.7 24,648 + MPMX19_00018 0.61 -0.5 24,649 - MPMX19_00018 0.61 -0.8 24,649 - MPMX19_00018 0.61 -2.5 24,730 + MPMX19_00018 0.67 +0.2 25,002 + MPMX19_00018 0.88 +0.1 25,002 + MPMX19_00018 0.88 +0.2 25,003 - MPMX19_00018 0.88 -0.3 25,130 + -0.3 25,130 + +1.1 25,130 + -1.0 25,130 + +0.5 25,130 + +0.6 25,130 + +0.1 25,130 + -0.4 25,130 + -0.9 25,130 + +0.7 25,130 + -0.6 25,131 - -1.6 25,131 - -1.0 25,131 - +0.4 25,131 - -0.4 25,131 - -0.3 25,131 - +0.3 25,131 - -1.7 25,131 - -0.8 25,131 - -1.4 25,131 - +0.7 25,131 - +0.6 25,158 + +0.2 25,214 + -0.8 25,214 + -0.5 25,214 + -0.3 25,214 + +0.7 25,214 + -1.4 25,215 - -0.5 25,215 - -0.8 25,215 - -0.6 25,215 - -1.5 25,215 - +1.1 25,259 - -2.3 25,350 - MPMX19_00019 0.31 -2.1 25,597 + +0.7 25,597 + +0.5 25,598 - -0.8 25,598 - +0.6 25,682 + MPMX19_00020 0.61 -0.6 25,683 - MPMX19_00020 0.62 -1.1 25,683 - MPMX19_00020 0.62 -0.8 25,683 - MPMX19_00020 0.62 +0.4 25,802 + -2.0 25,803 - -0.6 25,858 + -0.8 25,858 + -0.6 25,858 + +0.3 25,858 + +0.3 25,858 + -0.8 25,858 + +0.1 25,858 + +0.3 25,858 + -0.4 25,858 + -1.2 25,858 + +0.4 25,858 + +0.5 25,858 + -0.7 25,858 + -1.1 25,858 + -0.3 25,859 - -0.7 25,859 - +0.4 25,859 - -0.2 25,859 - -0.6 25,859 - +0.1 25,859 - -0.6 25,859 - -1.4 25,859 - -1.7 25,859 - +0.7 25,859 - -0.1 25,859 - +0.7 25,859 - -0.6 25,859 - -0.3 25,859 - +0.6 26,049 - MPMX19_00021 0.31 +0.9 26,049 - MPMX19_00021 0.31 -1.0 26,049 - MPMX19_00021 0.31 +0.2 26,049 - MPMX19_00021 0.31 -2.0 26,052 - MPMX19_00021 0.31 -0.7 26,052 - MPMX19_00021 0.31 -0.3 26,052 - MPMX19_00021 0.31 -1.1 26,052 - MPMX19_00021 0.31 +0.1
Or see this region's nucleotide sequence