Strain Fitness in Escherichia coli ECOR27 around NOLOHH_23455

Experiment: RB49

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RB49
4,615,622	+	kdpB	NOLOHH_23445	0.82	-0.3
4,615,622	+	kdpB	NOLOHH_23445	0.82	+0.7
4,615,622	+	kdpB	NOLOHH_23445	0.82	+0.3
4,615,622	+	kdpB	NOLOHH_23445	0.82	+1.7
4,615,623	-	kdpB	NOLOHH_23445	0.82	-0.1
4,615,623	-	kdpB	NOLOHH_23445	0.82	+1.1
4,615,623	-	kdpB	NOLOHH_23445	0.82	-0.6
4,615,626	+	kdpB	NOLOHH_23445	0.82	+0.7
4,615,626	+	kdpB	NOLOHH_23445	0.82	+0.5
4,615,627	-	kdpB	NOLOHH_23445	0.82	-0.4
4,615,858	+				+0.5
4,615,861	-				+0.0
4,615,958	+				+0.3
4,616,005	+				-0.8
4,616,027	+				+0.3
4,616,027	+				+0.2
4,616,028	-				+0.7
4,616,028	-				+1.5
4,616,028	-				-1.3
4,616,135	+	kdpC	NOLOHH_23450	0.24	-0.8
4,616,136	-	kdpC	NOLOHH_23450	0.25	-0.3
4,616,136	-	kdpC	NOLOHH_23450	0.25	-1.3
4,616,185	-	kdpC	NOLOHH_23450	0.33	+0.0
4,616,223	+	kdpC	NOLOHH_23450	0.40	+0.1
4,616,287	+	kdpC	NOLOHH_23450	0.51	-1.3
4,616,288	-	kdpC	NOLOHH_23450	0.51	+1.5
4,616,385	-	kdpC	NOLOHH_23450	0.68	-1.3
4,616,388	-	kdpC	NOLOHH_23450	0.69	+1.5
4,616,439	-	kdpC	NOLOHH_23450	0.77	-0.4
4,616,502	+	kdpC	NOLOHH_23450	0.88	+0.6
4,616,503	-	kdpC	NOLOHH_23450	0.89	+1.2
4,616,576	+				+0.3
4,616,577	-				-0.8
4,616,760	+				-0.0
4,616,902	-	kdpD	NOLOHH_23455	0.13	+2.1
4,616,902	-	kdpD	NOLOHH_23455	0.13	-0.9
4,616,940	+	kdpD	NOLOHH_23455	0.14	+0.7
4,616,977	-	kdpD	NOLOHH_23455	0.16	+2.3
4,616,979	+	kdpD	NOLOHH_23455	0.16	+0.6
4,617,149	-	kdpD	NOLOHH_23455	0.22	+1.5
4,617,149	-	kdpD	NOLOHH_23455	0.22	-0.4
4,617,149	-	kdpD	NOLOHH_23455	0.22	-0.8
4,617,150	+	kdpD	NOLOHH_23455	0.22	+0.8
4,617,323	+	kdpD	NOLOHH_23455	0.28	+0.2
4,617,323	+	kdpD	NOLOHH_23455	0.28	+1.7
4,617,324	-	kdpD	NOLOHH_23455	0.28	+0.2
4,617,412	+	kdpD	NOLOHH_23455	0.32	+1.9
4,617,412	+	kdpD	NOLOHH_23455	0.32	+0.5
4,617,413	-	kdpD	NOLOHH_23455	0.32	+1.7
4,617,476	+	kdpD	NOLOHH_23455	0.34	-0.6
4,617,476	+	kdpD	NOLOHH_23455	0.34	-1.8
4,617,543	-	kdpD	NOLOHH_23455	0.37	+1.2
4,617,565	-	kdpD	NOLOHH_23455	0.37	+1.6
4,617,800	+	kdpD	NOLOHH_23455	0.46	+0.2
4,617,853	+	kdpD	NOLOHH_23455	0.48	-1.5
4,617,853	+	kdpD	NOLOHH_23455	0.48	-2.1
4,617,853	+	kdpD	NOLOHH_23455	0.48	+0.3
4,617,853	+	kdpD	NOLOHH_23455	0.48	-0.3
4,617,854	-	kdpD	NOLOHH_23455	0.48	+1.3
4,617,988	+	kdpD	NOLOHH_23455	0.53	-0.8
4,617,988	+	kdpD	NOLOHH_23455	0.53	-0.3
4,618,041	+	kdpD	NOLOHH_23455	0.55	-0.8
4,618,042	-	kdpD	NOLOHH_23455	0.55	+0.7
4,618,103	+	kdpD	NOLOHH_23455	0.57	+0.5
4,618,103	+	kdpD	NOLOHH_23455	0.57	+0.2
4,618,103	+	kdpD	NOLOHH_23455	0.57	-0.3
4,618,103	+	kdpD	NOLOHH_23455	0.57	-1.3
4,618,103	+	kdpD	NOLOHH_23455	0.57	-0.3
4,618,103	+	kdpD	NOLOHH_23455	0.57	-1.3
4,618,103	+	kdpD	NOLOHH_23455	0.57	+0.2
4,618,104	-	kdpD	NOLOHH_23455	0.58	-0.3
4,618,104	-	kdpD	NOLOHH_23455	0.58	+0.7
4,618,104	-	kdpD	NOLOHH_23455	0.58	-0.6
4,618,104	-	kdpD	NOLOHH_23455	0.58	-0.6
4,618,104	-	kdpD	NOLOHH_23455	0.58	+2.5
4,618,104	-	kdpD	NOLOHH_23455	0.58	+0.1
4,618,105	+	kdpD	NOLOHH_23455	0.58	+0.2
4,618,174	-	kdpD	NOLOHH_23455	0.60	-0.3
4,618,174	-	kdpD	NOLOHH_23455	0.60	+1.7
4,618,227	+	kdpD	NOLOHH_23455	0.62	+3.1
4,618,461	+	kdpD	NOLOHH_23455	0.71	+1.2
4,618,461	+	kdpD	NOLOHH_23455	0.71	+1.6
4,618,583	+	kdpD	NOLOHH_23455	0.75	-0.9
4,618,584	-	kdpD	NOLOHH_23455	0.75	-0.7
4,618,717	-	kdpD	NOLOHH_23455	0.80	-1.3
4,618,721	+	kdpD	NOLOHH_23455	0.80	-2.3
4,618,722	-	kdpD	NOLOHH_23455	0.81	+1.7
4,618,790	+	kdpD	NOLOHH_23455	0.83	-0.3
4,618,790	+	kdpD	NOLOHH_23455	0.83	+2.7
4,619,046	-				-0.3
4,619,046	-				-0.5
4,619,052	+				-2.1
4,619,132	+				+0.2
4,619,132	+				-0.3
4,619,132	+				+3.3
4,619,132	+				+1.7
4,619,133	-				-0.5
4,619,238	+				+0.3
4,619,238	+				+0.4
4,619,238	+				+0.7
4,619,239	-				+1.7
4,619,325	+	kdpE	NOLOHH_23460	0.12	-0.5
4,619,325	+	kdpE	NOLOHH_23460	0.12	+0.2
4,619,326	-	kdpE	NOLOHH_23460	0.13	+0.3
4,619,387	+	kdpE	NOLOHH_23460	0.22	-0.8
4,619,541	-	kdpE	NOLOHH_23460	0.44	-0.8
4,619,736	-	kdpE	NOLOHH_23460	0.73	-1.6
4,619,767	+	kdpE	NOLOHH_23460	0.78	+0.2
4,619,767	+	kdpE	NOLOHH_23460	0.78	+1.7
4,619,819	+	kdpE	NOLOHH_23460	0.85	-0.3
4,619,823	+	kdpE	NOLOHH_23460	0.86	-0.6
4,619,824	-	kdpE	NOLOHH_23460	0.86	+1.3
4,619,824	-	kdpE	NOLOHH_23460	0.86	+0.7
4,619,963	+				+1.6
4,619,964	-				+0.2
4,619,998	-				+0.7
4,619,998	-				+0.3
4,620,089	+				+0.7
4,620,159	+				+1.7