Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_08695 and OKGIIK_08700 are separated by 71 nucleotides OKGIIK_08700 and OKGIIK_08705 are separated by 51 nucleotides OKGIIK_08705 and OKGIIK_08710 are separated by 58 nucleotides
OKGIIK_08695: OKGIIK_08695 - hypothetical protein, at 1,896,191 to 1,897,276
_08695
OKGIIK_08700: OKGIIK_08700 - hypothetical protein, at 1,897,348 to 1,897,725
_08700
OKGIIK_08705: OKGIIK_08705 - hypothetical protein, at 1,897,777 to 1,898,094
_08705
OKGIIK_08710: OKGIIK_08710 - phage major capsid protein, at 1,898,153 to 1,899,190
_08710
Position (kb)
1897
1898 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1896.348 kb on + strand, within OKGIIK_08695 at 1896.399 kb on - strand, within OKGIIK_08695 at 1896.561 kb on + strand, within OKGIIK_08695 at 1896.561 kb on + strand, within OKGIIK_08695 at 1896.561 kb on + strand, within OKGIIK_08695 at 1896.562 kb on - strand, within OKGIIK_08695 at 1896.562 kb on - strand, within OKGIIK_08695 at 1896.562 kb on - strand, within OKGIIK_08695 at 1896.562 kb on - strand, within OKGIIK_08695 at 1896.562 kb on - strand, within OKGIIK_08695 at 1896.562 kb on - strand, within OKGIIK_08695 at 1896.562 kb on - strand, within OKGIIK_08695 at 1896.562 kb on - strand, within OKGIIK_08695 at 1896.671 kb on - strand, within OKGIIK_08695 at 1896.671 kb on - strand, within OKGIIK_08695 at 1896.720 kb on + strand, within OKGIIK_08695 at 1896.720 kb on + strand, within OKGIIK_08695 at 1896.721 kb on - strand, within OKGIIK_08695 at 1896.721 kb on - strand, within OKGIIK_08695 at 1896.721 kb on - strand, within OKGIIK_08695 at 1896.777 kb on + strand, within OKGIIK_08695 at 1896.777 kb on + strand, within OKGIIK_08695 at 1896.777 kb on + strand, within OKGIIK_08695 at 1896.777 kb on + strand, within OKGIIK_08695 at 1896.777 kb on + strand, within OKGIIK_08695 at 1896.777 kb on + strand, within OKGIIK_08695 at 1896.778 kb on - strand, within OKGIIK_08695 at 1896.778 kb on - strand, within OKGIIK_08695 at 1896.778 kb on - strand, within OKGIIK_08695 at 1896.778 kb on - strand, within OKGIIK_08695 at 1896.778 kb on - strand, within OKGIIK_08695 at 1896.778 kb on - strand, within OKGIIK_08695 at 1896.778 kb on - strand, within OKGIIK_08695 at 1896.778 kb on - strand, within OKGIIK_08695 at 1896.778 kb on - strand, within OKGIIK_08695 at 1896.787 kb on - strand, within OKGIIK_08695 at 1896.818 kb on + strand, within OKGIIK_08695 at 1896.819 kb on - strand, within OKGIIK_08695 at 1896.819 kb on - strand, within OKGIIK_08695 at 1896.841 kb on + strand, within OKGIIK_08695 at 1896.928 kb on - strand, within OKGIIK_08695 at 1896.933 kb on + strand, within OKGIIK_08695 at 1896.933 kb on + strand, within OKGIIK_08695 at 1896.933 kb on + strand, within OKGIIK_08695 at 1896.933 kb on + strand, within OKGIIK_08695 at 1896.933 kb on + strand, within OKGIIK_08695 at 1896.933 kb on + strand, within OKGIIK_08695 at 1896.934 kb on - strand, within OKGIIK_08695 at 1896.934 kb on - strand, within OKGIIK_08695 at 1896.934 kb on - strand, within OKGIIK_08695 at 1897.032 kb on + strand, within OKGIIK_08695 at 1897.032 kb on + strand, within OKGIIK_08695 at 1897.032 kb on + strand, within OKGIIK_08695 at 1897.032 kb on + strand, within OKGIIK_08695 at 1897.032 kb on + strand, within OKGIIK_08695 at 1897.032 kb on + strand, within OKGIIK_08695 at 1897.032 kb on + strand, within OKGIIK_08695 at 1897.032 kb on + strand, within OKGIIK_08695 at 1897.033 kb on - strand, within OKGIIK_08695 at 1897.033 kb on - strand, within OKGIIK_08695 at 1897.033 kb on - strand, within OKGIIK_08695 at 1897.065 kb on + strand, within OKGIIK_08695 at 1897.065 kb on + strand, within OKGIIK_08695 at 1897.065 kb on + strand, within OKGIIK_08695 at 1897.065 kb on + strand, within OKGIIK_08695 at 1897.092 kb on + strand, within OKGIIK_08695 at 1897.101 kb on + strand, within OKGIIK_08695 at 1897.102 kb on - strand, within OKGIIK_08695 at 1897.260 kb on + strand at 1897.260 kb on + strand at 1897.261 kb on - strand at 1897.261 kb on - strand at 1897.280 kb on + strand at 1897.280 kb on + strand at 1897.281 kb on - strand at 1897.281 kb on - strand at 1897.281 kb on - strand at 1897.281 kb on - strand at 1897.281 kb on - strand at 1897.281 kb on - strand at 1897.289 kb on + strand at 1897.289 kb on + strand at 1897.289 kb on + strand at 1897.290 kb on - strand at 1897.290 kb on - strand at 1897.349 kb on + strand at 1897.520 kb on + strand, within OKGIIK_08700 at 1897.520 kb on + strand, within OKGIIK_08700 at 1897.521 kb on - strand, within OKGIIK_08700 at 1897.729 kb on + strand at 1897.729 kb on + strand at 1897.730 kb on - strand at 1897.730 kb on - strand at 1897.730 kb on - strand at 1897.730 kb on - strand at 1897.790 kb on + strand at 1897.790 kb on + strand at 1897.791 kb on - strand at 1897.848 kb on - strand, within OKGIIK_08705 at 1898.205 kb on + strand at 1898.226 kb on + strand at 1898.226 kb on + strand at 1898.227 kb on - strand at 1898.227 kb on - strand at 1898.227 kb on - strand at 1898.235 kb on + strand at 1898.235 kb on + strand at 1898.235 kb on + strand at 1898.322 kb on + strand, within OKGIIK_08710 at 1898.322 kb on + strand, within OKGIIK_08710 at 1898.322 kb on + strand, within OKGIIK_08710 at 1898.322 kb on + strand, within OKGIIK_08710 at 1898.322 kb on + strand, within OKGIIK_08710 at 1898.322 kb on + strand, within OKGIIK_08710 at 1898.322 kb on + strand, within OKGIIK_08710 at 1898.323 kb on - strand, within OKGIIK_08710 at 1898.323 kb on - strand, within OKGIIK_08710 at 1898.323 kb on - strand, within OKGIIK_08710 at 1898.323 kb on - strand, within OKGIIK_08710 at 1898.499 kb on + strand, within OKGIIK_08710 at 1898.499 kb on + strand, within OKGIIK_08710 at 1898.499 kb on + strand, within OKGIIK_08710 at 1898.500 kb on - strand, within OKGIIK_08710 at 1898.500 kb on - strand, within OKGIIK_08710 at 1898.500 kb on - strand, within OKGIIK_08710 at 1898.500 kb on - strand, within OKGIIK_08710 at 1898.500 kb on - strand, within OKGIIK_08710 at 1898.500 kb on - strand, within OKGIIK_08710 at 1898.508 kb on + strand, within OKGIIK_08710 at 1898.508 kb on + strand, within OKGIIK_08710 at 1898.509 kb on - strand, within OKGIIK_08710 at 1898.554 kb on - strand, within OKGIIK_08710 at 1898.637 kb on + strand, within OKGIIK_08710 at 1898.637 kb on + strand, within OKGIIK_08710 at 1898.638 kb on - strand, within OKGIIK_08710 at 1898.638 kb on - strand, within OKGIIK_08710 at 1898.638 kb on - strand, within OKGIIK_08710 at 1898.638 kb on - strand, within OKGIIK_08710 at 1898.638 kb on - strand, within OKGIIK_08710 at 1898.641 kb on + strand, within OKGIIK_08710 at 1898.641 kb on + strand, within OKGIIK_08710 at 1898.641 kb on + strand, within OKGIIK_08710 at 1898.641 kb on + strand, within OKGIIK_08710 at 1898.641 kb on + strand, within OKGIIK_08710 at 1898.641 kb on + strand, within OKGIIK_08710 at 1898.641 kb on + strand, within OKGIIK_08710 at 1898.642 kb on - strand, within OKGIIK_08710 at 1898.642 kb on - strand, within OKGIIK_08710 at 1898.642 kb on - strand, within OKGIIK_08710 at 1898.642 kb on - strand, within OKGIIK_08710 at 1898.642 kb on - strand, within OKGIIK_08710 at 1898.642 kb on - strand, within OKGIIK_08710 at 1898.642 kb on - strand, within OKGIIK_08710 at 1898.642 kb on - strand, within OKGIIK_08710 at 1898.642 kb on - strand, within OKGIIK_08710 at 1898.696 kb on + strand, within OKGIIK_08710 at 1898.696 kb on + strand, within OKGIIK_08710 at 1898.696 kb on + strand, within OKGIIK_08710 at 1898.696 kb on + strand, within OKGIIK_08710 at 1898.696 kb on + strand, within OKGIIK_08710 at 1898.697 kb on - strand, within OKGIIK_08710 at 1898.697 kb on - strand, within OKGIIK_08710 at 1898.697 kb on - strand, within OKGIIK_08710 at 1898.697 kb on - strand, within OKGIIK_08710
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,896,348 + OKGIIK_08695 0.14 -0.9 1,896,399 - OKGIIK_08695 0.19 +1.2 1,896,561 + OKGIIK_08695 0.34 -0.8 1,896,561 + OKGIIK_08695 0.34 +0.8 1,896,561 + OKGIIK_08695 0.34 -2.7 1,896,562 - OKGIIK_08695 0.34 +1.5 1,896,562 - OKGIIK_08695 0.34 -2.2 1,896,562 - OKGIIK_08695 0.34 +0.1 1,896,562 - OKGIIK_08695 0.34 -1.5 1,896,562 - OKGIIK_08695 0.34 +0.1 1,896,562 - OKGIIK_08695 0.34 -0.2 1,896,562 - OKGIIK_08695 0.34 -1.1 1,896,562 - OKGIIK_08695 0.34 +0.0 1,896,671 - OKGIIK_08695 0.44 -1.8 1,896,671 - OKGIIK_08695 0.44 +0.4 1,896,720 + OKGIIK_08695 0.49 -0.1 1,896,720 + OKGIIK_08695 0.49 -1.1 1,896,721 - OKGIIK_08695 0.49 +1.1 1,896,721 - OKGIIK_08695 0.49 +0.2 1,896,721 - OKGIIK_08695 0.49 +0.4 1,896,777 + OKGIIK_08695 0.54 -1.1 1,896,777 + OKGIIK_08695 0.54 +1.4 1,896,777 + OKGIIK_08695 0.54 +1.8 1,896,777 + OKGIIK_08695 0.54 -0.1 1,896,777 + OKGIIK_08695 0.54 +0.1 1,896,777 + OKGIIK_08695 0.54 -2.1 1,896,778 - OKGIIK_08695 0.54 -0.4 1,896,778 - OKGIIK_08695 0.54 -0.2 1,896,778 - OKGIIK_08695 0.54 +0.8 1,896,778 - OKGIIK_08695 0.54 -2.0 1,896,778 - OKGIIK_08695 0.54 +0.4 1,896,778 - OKGIIK_08695 0.54 +0.8 1,896,778 - OKGIIK_08695 0.54 -1.1 1,896,778 - OKGIIK_08695 0.54 +0.4 1,896,778 - OKGIIK_08695 0.54 +1.2 1,896,787 - OKGIIK_08695 0.55 -1.5 1,896,818 + OKGIIK_08695 0.58 -2.2 1,896,819 - OKGIIK_08695 0.58 -1.3 1,896,819 - OKGIIK_08695 0.58 +0.1 1,896,841 + OKGIIK_08695 0.60 +0.1 1,896,928 - OKGIIK_08695 0.68 -0.6 1,896,933 + OKGIIK_08695 0.68 +0.1 1,896,933 + OKGIIK_08695 0.68 -0.4 1,896,933 + OKGIIK_08695 0.68 -0.2 1,896,933 + OKGIIK_08695 0.68 -1.2 1,896,933 + OKGIIK_08695 0.68 -1.2 1,896,933 + OKGIIK_08695 0.68 -1.5 1,896,934 - OKGIIK_08695 0.68 +0.1 1,896,934 - OKGIIK_08695 0.68 +0.8 1,896,934 - OKGIIK_08695 0.68 -0.4 1,897,032 + OKGIIK_08695 0.77 -0.1 1,897,032 + OKGIIK_08695 0.77 -0.0 1,897,032 + OKGIIK_08695 0.77 +1.9 1,897,032 + OKGIIK_08695 0.77 +0.1 1,897,032 + OKGIIK_08695 0.77 +1.4 1,897,032 + OKGIIK_08695 0.77 -2.0 1,897,032 + OKGIIK_08695 0.77 -2.8 1,897,032 + OKGIIK_08695 0.77 +0.6 1,897,033 - OKGIIK_08695 0.78 +0.6 1,897,033 - OKGIIK_08695 0.78 -2.9 1,897,033 - OKGIIK_08695 0.78 +1.0 1,897,065 + OKGIIK_08695 0.80 -1.9 1,897,065 + OKGIIK_08695 0.80 +0.4 1,897,065 + OKGIIK_08695 0.80 -0.5 1,897,065 + OKGIIK_08695 0.80 -1.0 1,897,092 + OKGIIK_08695 0.83 -2.1 1,897,101 + OKGIIK_08695 0.84 -0.3 1,897,102 - OKGIIK_08695 0.84 -2.3 1,897,260 + +0.7 1,897,260 + +0.9 1,897,261 - +0.1 1,897,261 - -0.2 1,897,280 + -0.0 1,897,280 + -1.3 1,897,281 - -1.2 1,897,281 - +0.1 1,897,281 - +0.4 1,897,281 - -0.7 1,897,281 - -0.2 1,897,281 - -0.9 1,897,289 + +0.4 1,897,289 + -0.4 1,897,289 + +0.8 1,897,290 - -0.5 1,897,290 - +0.4 1,897,349 + +0.4 1,897,520 + OKGIIK_08700 0.46 -2.7 1,897,520 + OKGIIK_08700 0.46 -0.4 1,897,521 - OKGIIK_08700 0.46 -0.5 1,897,729 + +0.7 1,897,729 + -1.6 1,897,730 - -0.6 1,897,730 - +0.4 1,897,730 - +0.4 1,897,730 - -0.6 1,897,790 + -0.7 1,897,790 + +0.2 1,897,791 - -1.8 1,897,848 - OKGIIK_08705 0.22 +0.1 1,898,205 + -2.0 1,898,226 + +0.2 1,898,226 + -0.2 1,898,227 - -0.5 1,898,227 - +0.6 1,898,227 - -0.9 1,898,235 + -1.7 1,898,235 + -2.1 1,898,235 + +0.8 1,898,322 + OKGIIK_08710 0.16 +0.2 1,898,322 + OKGIIK_08710 0.16 -0.2 1,898,322 + OKGIIK_08710 0.16 +1.6 1,898,322 + OKGIIK_08710 0.16 -0.9 1,898,322 + OKGIIK_08710 0.16 -1.4 1,898,322 + OKGIIK_08710 0.16 -0.2 1,898,322 + OKGIIK_08710 0.16 +1.1 1,898,323 - OKGIIK_08710 0.16 -0.8 1,898,323 - OKGIIK_08710 0.16 -0.4 1,898,323 - OKGIIK_08710 0.16 -0.5 1,898,323 - OKGIIK_08710 0.16 -3.0 1,898,499 + OKGIIK_08710 0.33 -0.9 1,898,499 + OKGIIK_08710 0.33 +0.4 1,898,499 + OKGIIK_08710 0.33 -0.6 1,898,500 - OKGIIK_08710 0.33 +0.6 1,898,500 - OKGIIK_08710 0.33 -2.2 1,898,500 - OKGIIK_08710 0.33 -0.5 1,898,500 - OKGIIK_08710 0.33 -2.0 1,898,500 - OKGIIK_08710 0.33 -1.1 1,898,500 - OKGIIK_08710 0.33 -0.2 1,898,508 + OKGIIK_08710 0.34 -0.3 1,898,508 + OKGIIK_08710 0.34 -0.4 1,898,509 - OKGIIK_08710 0.34 -0.4 1,898,554 - OKGIIK_08710 0.39 -2.6 1,898,637 + OKGIIK_08710 0.47 -1.1 1,898,637 + OKGIIK_08710 0.47 -2.1 1,898,638 - OKGIIK_08710 0.47 -1.4 1,898,638 - OKGIIK_08710 0.47 -0.7 1,898,638 - OKGIIK_08710 0.47 -1.2 1,898,638 - OKGIIK_08710 0.47 -0.8 1,898,638 - OKGIIK_08710 0.47 -0.2 1,898,641 + OKGIIK_08710 0.47 -1.3 1,898,641 + OKGIIK_08710 0.47 -0.7 1,898,641 + OKGIIK_08710 0.47 +0.4 1,898,641 + OKGIIK_08710 0.47 -0.8 1,898,641 + OKGIIK_08710 0.47 +0.4 1,898,641 + OKGIIK_08710 0.47 -1.1 1,898,641 + OKGIIK_08710 0.47 +0.4 1,898,642 - OKGIIK_08710 0.47 -0.5 1,898,642 - OKGIIK_08710 0.47 -2.0 1,898,642 - OKGIIK_08710 0.47 +1.9 1,898,642 - OKGIIK_08710 0.47 +0.3 1,898,642 - OKGIIK_08710 0.47 -0.8 1,898,642 - OKGIIK_08710 0.47 -0.2 1,898,642 - OKGIIK_08710 0.47 +0.3 1,898,642 - OKGIIK_08710 0.47 -1.9 1,898,642 - OKGIIK_08710 0.47 +0.4 1,898,696 + OKGIIK_08710 0.52 -0.6 1,898,696 + OKGIIK_08710 0.52 +0.1 1,898,696 + OKGIIK_08710 0.52 +0.4 1,898,696 + OKGIIK_08710 0.52 -0.1 1,898,696 + OKGIIK_08710 0.52 -2.0 1,898,697 - OKGIIK_08710 0.52 -2.5 1,898,697 - OKGIIK_08710 0.52 +1.6 1,898,697 - OKGIIK_08710 0.52 -1.5 1,898,697 - OKGIIK_08710 0.52 -0.7
Or see this region's nucleotide sequence