Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05250

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmoeB and OKGIIK_05250 are separated by 192 nucleotidesOKGIIK_05250 and OKGIIK_05255 are separated by 4 nucleotidesOKGIIK_05255 and moaA are separated by 247 nucleotides OKGIIK_05245: moeB - molybdopterin-synthase adenylyltransferase MoeB, at 1,146,383 to 1,147,579 moeB OKGIIK_05250: OKGIIK_05250 - hypothetical protein, at 1,147,772 to 1,148,080 _05250 OKGIIK_05255: OKGIIK_05255 - Ribonucleotide reductase subunit alpha, at 1,148,085 to 1,148,489 _05255 OKGIIK_05260: moaA - GTP 3',8-cyclase MoaA, at 1,148,737 to 1,149,717 moaA Position (kb) 1147 1148 1149Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1146.786 kb on + strand, within moeBat 1146.786 kb on + strand, within moeBat 1146.787 kb on - strand, within moeBat 1147.047 kb on + strand, within moeBat 1147.048 kb on - strand, within moeBat 1147.048 kb on - strand, within moeBat 1147.067 kb on + strand, within moeBat 1147.067 kb on + strand, within moeBat 1147.068 kb on - strand, within moeBat 1147.085 kb on + strand, within moeBat 1147.086 kb on - strand, within moeBat 1147.107 kb on - strand, within moeBat 1147.107 kb on - strand, within moeBat 1147.158 kb on + strand, within moeBat 1147.198 kb on + strand, within moeBat 1147.247 kb on + strand, within moeBat 1147.247 kb on + strand, within moeBat 1147.247 kb on + strand, within moeBat 1147.248 kb on - strand, within moeBat 1147.248 kb on - strand, within moeBat 1147.248 kb on - strand, within moeBat 1147.313 kb on + strand, within moeBat 1147.313 kb on + strand, within moeBat 1147.313 kb on + strand, within moeBat 1147.313 kb on + strand, within moeBat 1147.313 kb on + strand, within moeBat 1147.313 kb on + strand, within moeBat 1147.314 kb on - strand, within moeBat 1147.314 kb on - strand, within moeBat 1147.314 kb on - strand, within moeBat 1147.314 kb on - strand, within moeBat 1147.314 kb on - strand, within moeBat 1147.314 kb on - strand, within moeBat 1147.314 kb on - strand, within moeBat 1147.314 kb on - strand, within moeBat 1147.433 kb on + strand, within moeBat 1147.496 kb on + strandat 1147.496 kb on + strandat 1147.617 kb on + strandat 1147.617 kb on + strandat 1147.618 kb on - strandat 1147.618 kb on - strandat 1147.663 kb on + strandat 1147.692 kb on - strandat 1147.712 kb on + strandat 1147.838 kb on + strand, within OKGIIK_05250at 1147.838 kb on + strand, within OKGIIK_05250at 1147.943 kb on + strand, within OKGIIK_05250at 1147.943 kb on + strand, within OKGIIK_05250at 1147.943 kb on + strand, within OKGIIK_05250at 1147.943 kb on + strand, within OKGIIK_05250at 1147.944 kb on - strand, within OKGIIK_05250at 1148.047 kb on + strand, within OKGIIK_05250at 1148.047 kb on + strand, within OKGIIK_05250at 1148.047 kb on + strand, within OKGIIK_05250at 1148.048 kb on - strand, within OKGIIK_05250at 1148.048 kb on - strand, within OKGIIK_05250at 1148.048 kb on - strand, within OKGIIK_05250at 1148.078 kb on + strandat 1148.079 kb on - strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.100 kb on + strandat 1148.101 kb on - strandat 1148.101 kb on - strandat 1148.101 kb on - strandat 1148.101 kb on - strandat 1148.101 kb on - strandat 1148.101 kb on - strandat 1148.101 kb on - strandat 1148.262 kb on - strand, within OKGIIK_05255at 1148.265 kb on + strand, within OKGIIK_05255at 1148.266 kb on - strand, within OKGIIK_05255at 1148.369 kb on + strand, within OKGIIK_05255at 1148.370 kb on - strand, within OKGIIK_05255at 1148.402 kb on - strand, within OKGIIK_05255at 1148.421 kb on + strand, within OKGIIK_05255at 1148.422 kb on - strand, within OKGIIK_05255at 1148.482 kb on - strandat 1148.525 kb on + strandat 1148.525 kb on + strandat 1148.525 kb on + strandat 1148.615 kb on + strandat 1148.616 kb on - strandat 1148.621 kb on - strandat 1148.776 kb on + strandat 1148.776 kb on + strandat 1148.810 kb on - strandat 1148.810 kb on - strandat 1148.810 kb on - strandat 1148.821 kb on + strandat 1148.821 kb on + strandat 1148.821 kb on + strandat 1148.821 kb on + strandat 1148.821 kb on + strandat 1148.821 kb on + strandat 1148.821 kb on + strandat 1148.822 kb on - strandat 1148.822 kb on - strandat 1148.822 kb on - strandat 1148.822 kb on - strandat 1148.822 kb on - strandat 1148.822 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,146,786 + moeB OKGIIK_05245 0.34 -0.4
1,146,786 + moeB OKGIIK_05245 0.34 -4.5
1,146,787 - moeB OKGIIK_05245 0.34 -0.7
1,147,047 + moeB OKGIIK_05245 0.55 -0.9
1,147,048 - moeB OKGIIK_05245 0.56 -2.2
1,147,048 - moeB OKGIIK_05245 0.56 -0.6
1,147,067 + moeB OKGIIK_05245 0.57 -1.1
1,147,067 + moeB OKGIIK_05245 0.57 -1.6
1,147,068 - moeB OKGIIK_05245 0.57 -0.9
1,147,085 + moeB OKGIIK_05245 0.59 -1.3
1,147,086 - moeB OKGIIK_05245 0.59 -1.7
1,147,107 - moeB OKGIIK_05245 0.60 -1.1
1,147,107 - moeB OKGIIK_05245 0.60 -1.1
1,147,158 + moeB OKGIIK_05245 0.65 -1.0
1,147,198 + moeB OKGIIK_05245 0.68 -1.0
1,147,247 + moeB OKGIIK_05245 0.72 +0.1
1,147,247 + moeB OKGIIK_05245 0.72 +0.4
1,147,247 + moeB OKGIIK_05245 0.72 -0.1
1,147,248 - moeB OKGIIK_05245 0.72 -1.2
1,147,248 - moeB OKGIIK_05245 0.72 +0.4
1,147,248 - moeB OKGIIK_05245 0.72 -0.1
1,147,313 + moeB OKGIIK_05245 0.78 -0.1
1,147,313 + moeB OKGIIK_05245 0.78 +0.9
1,147,313 + moeB OKGIIK_05245 0.78 +1.6
1,147,313 + moeB OKGIIK_05245 0.78 -0.7
1,147,313 + moeB OKGIIK_05245 0.78 +0.1
1,147,313 + moeB OKGIIK_05245 0.78 -2.0
1,147,314 - moeB OKGIIK_05245 0.78 -1.0
1,147,314 - moeB OKGIIK_05245 0.78 -0.1
1,147,314 - moeB OKGIIK_05245 0.78 +0.1
1,147,314 - moeB OKGIIK_05245 0.78 -0.4
1,147,314 - moeB OKGIIK_05245 0.78 -0.2
1,147,314 - moeB OKGIIK_05245 0.78 -1.7
1,147,314 - moeB OKGIIK_05245 0.78 +1.7
1,147,314 - moeB OKGIIK_05245 0.78 -0.1
1,147,433 + moeB OKGIIK_05245 0.88 -0.4
1,147,496 + +1.4
1,147,496 + -1.7
1,147,617 + +0.8
1,147,617 + -1.0
1,147,618 - -2.9
1,147,618 - -2.1
1,147,663 + +0.2
1,147,692 - -0.6
1,147,712 + -0.4
1,147,838 + OKGIIK_05250 0.21 -0.4
1,147,838 + OKGIIK_05250 0.21 -1.7
1,147,943 + OKGIIK_05250 0.55 -0.4
1,147,943 + OKGIIK_05250 0.55 -1.5
1,147,943 + OKGIIK_05250 0.55 +0.1
1,147,943 + OKGIIK_05250 0.55 +0.4
1,147,944 - OKGIIK_05250 0.56 +0.1
1,148,047 + OKGIIK_05250 0.89 +0.7
1,148,047 + OKGIIK_05250 0.89 -1.8
1,148,047 + OKGIIK_05250 0.89 -2.0
1,148,048 - OKGIIK_05250 0.89 -0.4
1,148,048 - OKGIIK_05250 0.89 +1.7
1,148,048 - OKGIIK_05250 0.89 -0.5
1,148,078 + -1.3
1,148,079 - -1.2
1,148,100 + -0.1
1,148,100 + +0.0
1,148,100 + +0.1
1,148,100 + +0.4
1,148,100 + -2.0
1,148,100 + -0.6
1,148,100 + -0.2
1,148,100 + -1.1
1,148,100 + -1.5
1,148,100 + -0.4
1,148,100 + -0.6
1,148,101 - -0.2
1,148,101 - -0.7
1,148,101 - -1.4
1,148,101 - +0.1
1,148,101 - +0.3
1,148,101 - -1.7
1,148,101 - +0.2
1,148,262 - OKGIIK_05255 0.44 -0.6
1,148,265 + OKGIIK_05255 0.44 +0.2
1,148,266 - OKGIIK_05255 0.45 -0.7
1,148,369 + OKGIIK_05255 0.70 +1.4
1,148,370 - OKGIIK_05255 0.70 -0.2
1,148,402 - OKGIIK_05255 0.78 -1.0
1,148,421 + OKGIIK_05255 0.83 +0.4
1,148,422 - OKGIIK_05255 0.83 -1.2
1,148,482 - +0.6
1,148,525 + -1.0
1,148,525 + +1.2
1,148,525 + -0.1
1,148,615 + +0.1
1,148,616 - +1.4
1,148,621 - +0.4
1,148,776 + -0.5
1,148,776 + +1.4
1,148,810 - +0.1
1,148,810 - +0.3
1,148,810 - +0.2
1,148,821 + +0.8
1,148,821 + -1.8
1,148,821 + -0.5
1,148,821 + -1.1
1,148,821 + -1.6
1,148,821 + -0.4
1,148,821 + -1.3
1,148,822 - -0.6
1,148,822 - -0.0
1,148,822 - -0.4
1,148,822 - -1.6
1,148,822 - +0.5
1,148,822 - -0.7

Or see this region's nucleotide sequence