Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06890 and MPMX19_06891 are separated by 86 nucleotides MPMX19_06891 and MPMX19_06892 overlap by 4 nucleotides MPMX19_06892 and MPMX19_06893 are separated by 219 nucleotides
MPMX19_06890: MPMX19_06890 - hypothetical protein, at 164,272 to 165,309
_06890
MPMX19_06891: MPMX19_06891 - Aliphatic sulfonates import ATP-binding protein SsuB, at 165,396 to 166,121
_06891
MPMX19_06892: MPMX19_06892 - Putative aliphatic sulfonates transport permease protein SsuC, at 166,118 to 166,993
_06892
MPMX19_06893: MPMX19_06893 - Nitrilotriacetate monooxygenase component A, at 167,213 to 168,532
_06893
Position (kb) 166
167 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 165.285 kb on + strand at 166.043 kb on - strand, within MPMX19_06891 at 166.134 kb on + strand at 166.134 kb on + strand at 166.134 kb on + strand at 166.134 kb on + strand at 166.134 kb on + strand at 166.135 kb on - strand at 166.135 kb on - strand at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.483 kb on - strand, within MPMX19_06892 at 166.483 kb on - strand, within MPMX19_06892 at 166.483 kb on - strand, within MPMX19_06892 at 166.483 kb on - strand, within MPMX19_06892 at 167.179 kb on - strand at 167.221 kb on - strand at 167.221 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 165,285 + -0.6 166,043 - MPMX19_06891 0.89 +0.6 166,134 + +0.1 166,134 + -2.9 166,134 + +0.3 166,134 + -2.6 166,134 + +0.7 166,135 - -0.2 166,135 - -0.6 166,210 - MPMX19_06892 0.11 -0.5 166,210 - MPMX19_06892 0.11 +0.0 166,210 - MPMX19_06892 0.11 -0.5 166,210 - MPMX19_06892 0.11 -1.7 166,210 - MPMX19_06892 0.11 -0.1 166,210 - MPMX19_06892 0.11 -1.1 166,210 - MPMX19_06892 0.11 -1.5 166,483 - MPMX19_06892 0.42 -0.9 166,483 - MPMX19_06892 0.42 -0.6 166,483 - MPMX19_06892 0.42 -1.0 166,483 - MPMX19_06892 0.42 -2.5 167,179 - -1.3 167,221 - -0.5 167,221 - -1.7
Or see this region's nucleotide sequence