Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06807 and MPMX19_06808 are separated by 213 nucleotides MPMX19_06808 and MPMX19_06809 are separated by 103 nucleotides
MPMX19_06807: MPMX19_06807 - Solute-binding protein, at 71,752 to 72,792
_06807
MPMX19_06808: MPMX19_06808 - HTH-type transcriptional regulator DmlR, at 73,006 to 73,947
_06808
MPMX19_06809: MPMX19_06809 - Glutathione-regulated potassium-efflux system ancillary protein KefF, at 74,051 to 74,854
_06809
Position (kb)
73
74 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 72.371 kb on + strand, within MPMX19_06807 at 72.371 kb on + strand, within MPMX19_06807 at 72.371 kb on + strand, within MPMX19_06807 at 72.372 kb on - strand, within MPMX19_06807 at 72.372 kb on - strand, within MPMX19_06807 at 72.372 kb on - strand, within MPMX19_06807 at 72.372 kb on - strand, within MPMX19_06807 at 72.380 kb on + strand, within MPMX19_06807 at 72.380 kb on + strand, within MPMX19_06807 at 72.380 kb on + strand, within MPMX19_06807 at 72.381 kb on - strand, within MPMX19_06807 at 72.405 kb on - strand, within MPMX19_06807 at 72.405 kb on - strand, within MPMX19_06807 at 72.405 kb on - strand, within MPMX19_06807 at 72.405 kb on - strand, within MPMX19_06807 at 72.405 kb on - strand, within MPMX19_06807 at 72.500 kb on + strand, within MPMX19_06807 at 72.501 kb on - strand, within MPMX19_06807 at 72.590 kb on + strand, within MPMX19_06807 at 72.591 kb on - strand, within MPMX19_06807 at 72.757 kb on + strand at 72.757 kb on + strand at 72.758 kb on - strand at 72.758 kb on - strand at 72.758 kb on - strand at 72.758 kb on - strand at 72.758 kb on - strand at 72.796 kb on + strand at 72.796 kb on + strand at 72.796 kb on + strand at 72.797 kb on - strand at 72.797 kb on - strand at 72.797 kb on - strand at 72.797 kb on - strand at 72.797 kb on - strand at 72.797 kb on - strand at 72.883 kb on + strand at 73.007 kb on + strand at 73.007 kb on + strand at 73.007 kb on + strand at 73.007 kb on + strand at 73.007 kb on + strand at 73.007 kb on + strand at 73.007 kb on + strand at 73.008 kb on - strand at 73.008 kb on - strand at 73.008 kb on - strand at 73.008 kb on - strand at 73.166 kb on + strand, within MPMX19_06808 at 73.167 kb on - strand, within MPMX19_06808 at 73.167 kb on - strand, within MPMX19_06808 at 73.167 kb on - strand, within MPMX19_06808 at 73.433 kb on + strand, within MPMX19_06808 at 73.433 kb on + strand, within MPMX19_06808 at 73.434 kb on - strand, within MPMX19_06808 at 73.434 kb on - strand, within MPMX19_06808 at 73.651 kb on - strand, within MPMX19_06808 at 73.926 kb on + strand at 73.926 kb on + strand at 73.926 kb on + strand at 73.926 kb on + strand at 73.926 kb on + strand at 73.926 kb on + strand at 73.926 kb on + strand at 73.926 kb on + strand at 73.926 kb on + strand at 73.926 kb on + strand at 73.926 kb on + strand at 73.927 kb on - strand at 73.927 kb on - strand at 73.927 kb on - strand at 73.927 kb on - strand at 73.927 kb on - strand at 73.927 kb on - strand at 73.966 kb on + strand at 73.966 kb on + strand at 73.966 kb on + strand at 73.967 kb on - strand at 73.967 kb on - strand at 73.967 kb on - strand at 73.987 kb on + strand at 73.987 kb on + strand at 73.987 kb on + strand at 73.987 kb on + strand at 73.988 kb on - strand at 73.988 kb on - strand at 73.988 kb on - strand at 73.988 kb on - strand at 73.990 kb on - strand at 74.012 kb on + strand at 74.012 kb on + strand at 74.012 kb on + strand at 74.012 kb on + strand at 74.013 kb on - strand at 74.013 kb on - strand at 74.013 kb on - strand at 74.013 kb on - strand at 74.013 kb on - strand at 74.013 kb on - strand at 74.013 kb on - strand at 74.013 kb on - strand at 74.013 kb on - strand at 74.168 kb on + strand, within MPMX19_06809 at 74.168 kb on + strand, within MPMX19_06809 at 74.168 kb on + strand, within MPMX19_06809 at 74.168 kb on + strand, within MPMX19_06809 at 74.169 kb on - strand, within MPMX19_06809 at 74.169 kb on - strand, within MPMX19_06809 at 74.173 kb on + strand, within MPMX19_06809 at 74.399 kb on + strand, within MPMX19_06809 at 74.400 kb on - strand, within MPMX19_06809 at 74.400 kb on - strand, within MPMX19_06809 at 74.400 kb on - strand, within MPMX19_06809 at 74.417 kb on + strand, within MPMX19_06809 at 74.418 kb on - strand, within MPMX19_06809 at 74.418 kb on - strand, within MPMX19_06809 at 74.503 kb on - strand, within MPMX19_06809 at 74.529 kb on - strand, within MPMX19_06809 at 74.597 kb on + strand, within MPMX19_06809 at 74.606 kb on + strand, within MPMX19_06809 at 74.606 kb on + strand, within MPMX19_06809 at 74.607 kb on - strand, within MPMX19_06809 at 74.633 kb on + strand, within MPMX19_06809 at 74.633 kb on + strand, within MPMX19_06809 at 74.633 kb on + strand, within MPMX19_06809 at 74.753 kb on + strand, within MPMX19_06809 at 74.754 kb on - strand, within MPMX19_06809 at 74.754 kb on - strand, within MPMX19_06809 at 74.825 kb on - strand at 74.917 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 72,371 + MPMX19_06807 0.59 -0.7 72,371 + MPMX19_06807 0.59 +2.0 72,371 + MPMX19_06807 0.59 +0.3 72,372 - MPMX19_06807 0.60 -1.3 72,372 - MPMX19_06807 0.60 -1.7 72,372 - MPMX19_06807 0.60 -2.1 72,372 - MPMX19_06807 0.60 -1.6 72,380 + MPMX19_06807 0.60 -0.3 72,380 + MPMX19_06807 0.60 +0.3 72,380 + MPMX19_06807 0.60 -0.4 72,381 - MPMX19_06807 0.60 -0.0 72,405 - MPMX19_06807 0.63 +0.1 72,405 - MPMX19_06807 0.63 +0.6 72,405 - MPMX19_06807 0.63 -0.9 72,405 - MPMX19_06807 0.63 -1.2 72,405 - MPMX19_06807 0.63 +2.9 72,500 + MPMX19_06807 0.72 -0.4 72,501 - MPMX19_06807 0.72 -2.1 72,590 + MPMX19_06807 0.80 -1.3 72,591 - MPMX19_06807 0.81 -1.7 72,757 + -1.0 72,757 + -2.5 72,758 - +0.2 72,758 - -0.9 72,758 - +1.1 72,758 - +1.7 72,758 - -1.7 72,796 + -0.4 72,796 + +1.9 72,796 + +0.5 72,797 - +1.9 72,797 - -0.4 72,797 - -0.4 72,797 - +0.3 72,797 - +0.1 72,797 - -1.0 72,883 + +2.7 73,007 + -1.5 73,007 + -1.1 73,007 + -0.7 73,007 + -0.3 73,007 + -0.4 73,007 + +0.4 73,007 + -1.2 73,008 - -0.7 73,008 - -0.1 73,008 - +1.7 73,008 - -1.3 73,166 + MPMX19_06808 0.17 +0.1 73,167 - MPMX19_06808 0.17 -0.4 73,167 - MPMX19_06808 0.17 -0.6 73,167 - MPMX19_06808 0.17 +0.1 73,433 + MPMX19_06808 0.45 +0.1 73,433 + MPMX19_06808 0.45 -0.5 73,434 - MPMX19_06808 0.45 -0.9 73,434 - MPMX19_06808 0.45 -1.7 73,651 - MPMX19_06808 0.68 -0.3 73,926 + -0.9 73,926 + +0.7 73,926 + -0.6 73,926 + -1.1 73,926 + -0.5 73,926 + -0.3 73,926 + -1.2 73,926 + -0.3 73,926 + +0.3 73,926 + +0.2 73,926 + -0.5 73,927 - +1.3 73,927 - +1.0 73,927 - +0.5 73,927 - +0.4 73,927 - +1.0 73,927 - +1.1 73,966 + -0.5 73,966 + -0.4 73,966 + +0.1 73,967 - -1.0 73,967 - -0.5 73,967 - -1.5 73,987 + +0.8 73,987 + -1.1 73,987 + -0.1 73,987 + +0.1 73,988 - -0.1 73,988 - +1.3 73,988 - -2.2 73,988 - -0.7 73,990 - -1.1 74,012 + -0.3 74,012 + -0.6 74,012 + -1.1 74,012 + -0.5 74,013 - -1.0 74,013 - +0.5 74,013 - -0.8 74,013 - -0.1 74,013 - -0.1 74,013 - -1.5 74,013 - -2.2 74,013 - -0.3 74,013 - +0.3 74,168 + MPMX19_06809 0.15 +0.1 74,168 + MPMX19_06809 0.15 -0.7 74,168 + MPMX19_06809 0.15 -1.1 74,168 + MPMX19_06809 0.15 +0.1 74,169 - MPMX19_06809 0.15 +1.0 74,169 - MPMX19_06809 0.15 -0.5 74,173 + MPMX19_06809 0.15 +0.3 74,399 + MPMX19_06809 0.43 +0.7 74,400 - MPMX19_06809 0.43 +0.5 74,400 - MPMX19_06809 0.43 -0.1 74,400 - MPMX19_06809 0.43 -0.9 74,417 + MPMX19_06809 0.46 +0.7 74,418 - MPMX19_06809 0.46 +0.3 74,418 - MPMX19_06809 0.46 -0.8 74,503 - MPMX19_06809 0.56 -1.5 74,529 - MPMX19_06809 0.59 -0.5 74,597 + MPMX19_06809 0.68 -0.2 74,606 + MPMX19_06809 0.69 +0.7 74,606 + MPMX19_06809 0.69 +0.1 74,607 - MPMX19_06809 0.69 +2.0 74,633 + MPMX19_06809 0.72 -0.6 74,633 + MPMX19_06809 0.72 -1.6 74,633 + MPMX19_06809 0.72 -2.2 74,753 + MPMX19_06809 0.87 -1.2 74,754 - MPMX19_06809 0.87 -0.5 74,754 - MPMX19_06809 0.87 +2.0 74,825 - +0.3 74,917 + -0.9
Or see this region's nucleotide sequence