Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06745 and MPMX19_06746 are separated by 82 nucleotides MPMX19_06746 and MPMX19_06747 overlap by 4 nucleotides MPMX19_06747 and MPMX19_06748 are separated by 3 nucleotides
MPMX19_06745: MPMX19_06745 - hypothetical protein, at 9,382 to 11,610
_06745
MPMX19_06746: MPMX19_06746 - Chemotaxis protein CheW, at 11,693 to 12,223
_06746
MPMX19_06747: MPMX19_06747 - Chemotaxis protein methyltransferase, at 12,220 to 13,107
_06747
MPMX19_06748: MPMX19_06748 - Protein-glutamate methylesterase/protein-glutamine glutaminase of group 3 operon, at 13,111 to 14,235
_06748
Position (kb)
11
12
13 Strain fitness (log2 ratio)
-2
-1
0
1 at 11.368 kb on + strand, within MPMX19_06745 at 11.369 kb on - strand, within MPMX19_06745 at 11.369 kb on - strand, within MPMX19_06745 at 11.369 kb on - strand, within MPMX19_06745 at 11.369 kb on - strand, within MPMX19_06745 at 11.597 kb on - strand at 11.729 kb on + strand at 11.729 kb on + strand at 11.729 kb on + strand at 11.729 kb on + strand at 11.729 kb on + strand at 11.730 kb on - strand at 11.730 kb on - strand at 11.730 kb on - strand at 11.766 kb on + strand, within MPMX19_06746 at 11.766 kb on + strand, within MPMX19_06746 at 11.767 kb on - strand, within MPMX19_06746 at 12.421 kb on + strand, within MPMX19_06747 at 12.421 kb on + strand, within MPMX19_06747 at 12.422 kb on - strand, within MPMX19_06747 at 12.422 kb on - strand, within MPMX19_06747 at 12.422 kb on - strand, within MPMX19_06747 at 12.422 kb on - strand, within MPMX19_06747 at 12.640 kb on + strand, within MPMX19_06747 at 12.640 kb on + strand, within MPMX19_06747 at 12.640 kb on + strand, within MPMX19_06747 at 12.640 kb on + strand, within MPMX19_06747 at 12.641 kb on - strand, within MPMX19_06747 at 12.641 kb on - strand, within MPMX19_06747 at 12.641 kb on - strand, within MPMX19_06747 at 12.641 kb on - strand, within MPMX19_06747 at 12.715 kb on - strand, within MPMX19_06747 at 12.715 kb on - strand, within MPMX19_06747 at 12.715 kb on - strand, within MPMX19_06747 at 12.802 kb on + strand, within MPMX19_06747 at 12.803 kb on - strand, within MPMX19_06747 at 12.803 kb on - strand, within MPMX19_06747 at 12.803 kb on - strand, within MPMX19_06747 at 12.904 kb on + strand, within MPMX19_06747 at 12.955 kb on + strand, within MPMX19_06747 at 12.956 kb on - strand, within MPMX19_06747 at 12.956 kb on - strand, within MPMX19_06747
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 11,368 + MPMX19_06745 0.89 -1.3 11,369 - MPMX19_06745 0.89 +0.3 11,369 - MPMX19_06745 0.89 -1.2 11,369 - MPMX19_06745 0.89 +0.3 11,369 - MPMX19_06745 0.89 +0.1 11,597 - -0.3 11,729 + +0.5 11,729 + -1.3 11,729 + -2.5 11,729 + -0.1 11,729 + -1.3 11,730 - -1.0 11,730 - -0.3 11,730 - -0.2 11,766 + MPMX19_06746 0.14 -0.5 11,766 + MPMX19_06746 0.14 -0.3 11,767 - MPMX19_06746 0.14 -2.6 12,421 + MPMX19_06747 0.23 -1.6 12,421 + MPMX19_06747 0.23 -0.1 12,422 - MPMX19_06747 0.23 -0.6 12,422 - MPMX19_06747 0.23 -1.0 12,422 - MPMX19_06747 0.23 +0.7 12,422 - MPMX19_06747 0.23 -0.9 12,640 + MPMX19_06747 0.47 -0.1 12,640 + MPMX19_06747 0.47 +0.0 12,640 + MPMX19_06747 0.47 +0.8 12,640 + MPMX19_06747 0.47 -0.1 12,641 - MPMX19_06747 0.47 +0.4 12,641 - MPMX19_06747 0.47 +1.5 12,641 - MPMX19_06747 0.47 +0.5 12,641 - MPMX19_06747 0.47 +0.1 12,715 - MPMX19_06747 0.56 +0.9 12,715 - MPMX19_06747 0.56 -0.6 12,715 - MPMX19_06747 0.56 +0.3 12,802 + MPMX19_06747 0.66 +0.5 12,803 - MPMX19_06747 0.66 -0.3 12,803 - MPMX19_06747 0.66 -0.0 12,803 - MPMX19_06747 0.66 -0.7 12,904 + MPMX19_06747 0.77 -0.5 12,955 + MPMX19_06747 0.83 -0.1 12,956 - MPMX19_06747 0.83 -0.9 12,956 - MPMX19_06747 0.83 -0.8
Or see this region's nucleotide sequence