Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06635

Experiment: NF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NF
				remove
155,354	+	MPMX19_06634	0.16	+0.5
155,355	-	MPMX19_06634	0.16	-1.0
155,355	-	MPMX19_06634	0.16	-0.1
155,372	+	MPMX19_06634	0.18	-0.3
155,372	+	MPMX19_06634	0.18	-0.1
155,373	-	MPMX19_06634	0.18	-1.7
155,373	-	MPMX19_06634	0.18	-0.8
155,373	-	MPMX19_06634	0.18	+0.9
155,416	+	MPMX19_06634	0.23	+0.4
155,416	+	MPMX19_06634	0.23	+1.1
155,416	+	MPMX19_06634	0.23	+1.7
155,416	+	MPMX19_06634	0.23	-0.4
155,416	+	MPMX19_06634	0.23	-0.4
155,416	+	MPMX19_06634	0.23	-0.3
155,416	+	MPMX19_06634	0.23	+0.1
155,417	-	MPMX19_06634	0.23	+1.7
155,459	+	MPMX19_06634	0.27	-0.3
155,459	+	MPMX19_06634	0.27	-0.1
155,459	+	MPMX19_06634	0.27	-0.8
155,459	+	MPMX19_06634	0.27	-1.9
155,459	+	MPMX19_06634	0.27	-2.7
155,460	-	MPMX19_06634	0.27	+0.1
155,460	-	MPMX19_06634	0.27	-1.0
155,460	-	MPMX19_06634	0.27	-0.8
155,460	-	MPMX19_06634	0.27	+0.4
155,460	-	MPMX19_06634	0.27	-1.6
155,460	-	MPMX19_06634	0.27	-0.5
155,460	-	MPMX19_06634	0.27	-1.4
155,460	-	MPMX19_06634	0.27	-0.7
155,642	+	MPMX19_06634	0.46	-1.5
155,642	+	MPMX19_06634	0.46	+2.1
155,643	-	MPMX19_06634	0.46	-1.1
155,681	+	MPMX19_06634	0.50	-0.5
155,681	+	MPMX19_06634	0.50	-0.3
155,681	+	MPMX19_06634	0.50	-1.7
155,682	-	MPMX19_06634	0.50	+0.7
155,682	-	MPMX19_06634	0.50	-1.4
155,682	-	MPMX19_06634	0.50	-1.0
155,682	-	MPMX19_06634	0.50	+0.3
155,682	-	MPMX19_06634	0.50	-1.7
155,682	-	MPMX19_06634	0.50	+1.1
155,682	-	MPMX19_06634	0.50	-1.1
155,682	-	MPMX19_06634	0.50	-1.0
155,693	+	MPMX19_06634	0.51	-0.3
155,694	-	MPMX19_06634	0.51	+0.2
155,735	+	MPMX19_06634	0.55	-1.3
155,735	+	MPMX19_06634	0.55	-0.0
155,735	+	MPMX19_06634	0.55	-0.9
155,735	+	MPMX19_06634	0.55	-0.1
155,735	+	MPMX19_06634	0.55	-1.3
155,735	+	MPMX19_06634	0.55	-0.7
155,735	+	MPMX19_06634	0.55	+1.0
155,735	+	MPMX19_06634	0.55	-0.9
155,735	+	MPMX19_06634	0.55	-1.2
155,735	+	MPMX19_06634	0.55	+1.1
155,735	+	MPMX19_06634	0.55	-0.5
155,735	+	MPMX19_06634	0.55	-1.3
155,735	+	MPMX19_06634	0.55	+0.4
155,735	+	MPMX19_06634	0.55	-1.5
155,735	+	MPMX19_06634	0.55	+0.4
155,735	+	MPMX19_06634	0.55	+0.1
155,735	+	MPMX19_06634	0.55	+0.9
155,736	-	MPMX19_06634	0.55	-0.7
155,736	-	MPMX19_06634	0.55	+0.1
155,736	-	MPMX19_06634	0.55	-0.6
155,736	-	MPMX19_06634	0.55	-0.0
155,736	-	MPMX19_06634	0.55	-0.1
155,736	-	MPMX19_06634	0.55	-0.4
155,736	-	MPMX19_06634	0.55	-0.2
155,736	-	MPMX19_06634	0.55	-0.8
155,736	-	MPMX19_06634	0.55	-1.2
155,736	-	MPMX19_06634	0.55	+0.5
155,736	-	MPMX19_06634	0.55	-1.3
155,736	-	MPMX19_06634	0.55	-1.3
155,810	+	MPMX19_06634	0.63	-1.0
155,810	+	MPMX19_06634	0.63	-1.4
155,810	+	MPMX19_06634	0.63	+0.4
155,811	-	MPMX19_06634	0.63	-1.1
155,811	-	MPMX19_06634	0.63	-0.6
155,811	-	MPMX19_06634	0.63	-0.3
155,811	-	MPMX19_06634	0.63	+0.3
155,900	+	MPMX19_06634	0.72	+0.3
155,900	+	MPMX19_06634	0.72	+0.9
155,900	+	MPMX19_06634	0.72	+0.2
155,901	-	MPMX19_06634	0.72	-1.1
155,901	-	MPMX19_06634	0.72	-0.4
155,901	-	MPMX19_06634	0.72	-2.2
155,901	-	MPMX19_06634	0.72	-0.8
156,201	+			+0.5
156,201	+			-0.4
156,201	+			-1.3
156,201	+			-0.8
156,201	+			+0.1
156,201	+			+0.4
156,201	+			+0.3
156,201	+			-0.2
156,201	+			+0.1
156,201	+			+0.1
156,202	-			-1.9
156,202	-			-1.3
156,202	-			+0.5
156,202	-			+0.2
156,202	-			-0.3
156,202	-			-0.1
156,202	-			-1.7
156,202	-			-0.6
156,202	-			+0.4
156,202	-			+0.9
156,420	+			-1.0
156,420	+			-0.7
156,420	+			+0.7
156,420	+			-0.1
156,420	+			-0.4
156,421	-			-2.0
156,421	-			-0.7
156,421	-			-0.8
156,421	-			+0.7
156,421	-			-1.1
156,421	-			-0.1
156,421	-			-2.1
156,421	-			-1.1
156,421	-			-0.7
156,522	+	MPMX19_06635	0.15	-0.1
156,522	+	MPMX19_06635	0.15	-0.8
156,522	+	MPMX19_06635	0.15	-1.2
156,523	-	MPMX19_06635	0.15	+0.1
156,523	-	MPMX19_06635	0.15	-0.2
156,523	-	MPMX19_06635	0.15	+1.5
156,672	+	MPMX19_06635	0.28	-1.4
156,672	+	MPMX19_06635	0.28	+0.1
156,672	+	MPMX19_06635	0.28	-0.9
156,672	+	MPMX19_06635	0.28	+0.7
156,672	+	MPMX19_06635	0.28	+0.5
156,672	+	MPMX19_06635	0.28	+0.4
156,672	+	MPMX19_06635	0.28	+0.4
156,673	-	MPMX19_06635	0.28	-0.0
156,673	-	MPMX19_06635	0.28	-1.2
156,673	-	MPMX19_06635	0.28	-2.0
156,720	+	MPMX19_06635	0.32	-2.0
156,720	+	MPMX19_06635	0.32	+0.6
156,720	+	MPMX19_06635	0.32	+0.0
156,721	-	MPMX19_06635	0.32	-0.6
156,721	-	MPMX19_06635	0.32	-0.3
156,721	-	MPMX19_06635	0.32	+0.9
156,721	-	MPMX19_06635	0.32	+0.1
156,721	-	MPMX19_06635	0.32	+0.3
156,721	-	MPMX19_06635	0.32	-0.5
156,721	-	MPMX19_06635	0.32	+0.1
156,721	-	MPMX19_06635	0.32	-1.7
156,747	+	MPMX19_06635	0.34	-0.2
156,747	+	MPMX19_06635	0.34	+0.4
156,747	+	MPMX19_06635	0.34	+0.1
156,747	+	MPMX19_06635	0.34	-0.3
156,747	+	MPMX19_06635	0.34	-0.7
156,747	+	MPMX19_06635	0.34	-1.5
156,747	+	MPMX19_06635	0.34	-1.4
156,747	+	MPMX19_06635	0.34	-0.6
156,747	+	MPMX19_06635	0.34	+0.6
156,747	+	MPMX19_06635	0.34	-2.3
156,747	+	MPMX19_06635	0.34	+0.3
156,747	+	MPMX19_06635	0.34	-1.9
156,748	-	MPMX19_06635	0.34	-0.4
156,748	-	MPMX19_06635	0.34	-0.0
156,748	-	MPMX19_06635	0.34	-0.8
156,748	-	MPMX19_06635	0.34	+0.4
156,748	-	MPMX19_06635	0.34	+0.8
156,748	-	MPMX19_06635	0.34	+0.7
157,390	+	MPMX19_06635	0.89	-0.9
157,390	+	MPMX19_06635	0.89	-0.3
157,390	+	MPMX19_06635	0.89	+0.2
157,390	+	MPMX19_06635	0.89	-1.7
157,390	+	MPMX19_06635	0.89	+0.1
157,390	+	MPMX19_06635	0.89	+0.1
157,390	+	MPMX19_06635	0.89	+0.3
157,390	+	MPMX19_06635	0.89	-1.0
157,390	+	MPMX19_06635	0.89	+1.1
157,390	+	MPMX19_06635	0.89	+0.7
157,390	+	MPMX19_06635	0.89	-1.6
157,390	+	MPMX19_06635	0.89	-0.3
157,390	+	MPMX19_06635	0.89	-0.7
157,390	+	MPMX19_06635	0.89	-2.0
157,390	+	MPMX19_06635	0.89	+0.3
157,391	-	MPMX19_06635	0.89	+1.2
157,391	-	MPMX19_06635	0.89	-0.4
157,391	-	MPMX19_06635	0.89	-1.5
157,391	-	MPMX19_06635	0.89	-0.8
157,413	+			-2.0
157,413	+			-1.4
157,413	+			-0.3
157,413	+			-0.2
157,414	-			-0.9
157,414	-			+0.1
157,414	-			-1.6
157,786	+	MPMX19_06636	0.33	-1.3
157,786	+	MPMX19_06636	0.33	-0.5
157,786	+	MPMX19_06636	0.33	+0.7
157,786	+	MPMX19_06636	0.33	-0.6
157,786	+	MPMX19_06636	0.33	+0.0
157,787	-	MPMX19_06636	0.33	-0.6
157,787	-	MPMX19_06636	0.33	+0.3
157,787	-	MPMX19_06636	0.33	+0.1
157,787	-	MPMX19_06636	0.33	+1.6
157,787	-	MPMX19_06636	0.33	+0.7
157,787	-	MPMX19_06636	0.33	+1.2
157,787	-	MPMX19_06636	0.33	-1.1
157,787	-	MPMX19_06636	0.33	-0.1
157,787	-	MPMX19_06636	0.33	-0.5
157,813	+	MPMX19_06636	0.37	-1.2
157,813	+	MPMX19_06636	0.37	+1.1
157,813	+	MPMX19_06636	0.37	-0.9
157,825	+	MPMX19_06636	0.39	-1.4
157,846	+	MPMX19_06636	0.42	+0.1
157,846	+	MPMX19_06636	0.42	-0.8
157,846	+	MPMX19_06636	0.42	+0.8
157,846	+	MPMX19_06636	0.42	-1.0
157,846	+	MPMX19_06636	0.42	-0.5
157,846	+	MPMX19_06636	0.42	+0.7
157,846	+	MPMX19_06636	0.42	+0.3
157,846	+	MPMX19_06636	0.42	+0.2
157,846	+	MPMX19_06636	0.42	-2.5
157,846	+	MPMX19_06636	0.42	+0.1
157,846	+	MPMX19_06636	0.42	-0.3
157,846	+	MPMX19_06636	0.42	-1.1
157,846	+	MPMX19_06636	0.42	-0.3
157,846	+	MPMX19_06636	0.42	+0.6
157,846	+	MPMX19_06636	0.42	-2.1
157,846	+	MPMX19_06636	0.42	-0.3
157,847	-	MPMX19_06636	0.42	+0.6
157,847	-	MPMX19_06636	0.42	-1.8
157,847	-	MPMX19_06636	0.42	-0.3
157,847	-	MPMX19_06636	0.42	-1.1
157,847	-	MPMX19_06636	0.42	+2.1
157,847	-	MPMX19_06636	0.42	-0.4
157,847	-	MPMX19_06636	0.42	-0.5
157,847	-	MPMX19_06636	0.42	-0.0
157,847	-	MPMX19_06636	0.42	+0.5
157,847	-	MPMX19_06636	0.42	+0.0
157,847	-	MPMX19_06636	0.42	-0.1
157,847	-	MPMX19_06636	0.42	+0.1
157,847	-	MPMX19_06636	0.42	-1.2
157,847	-	MPMX19_06636	0.42	-1.2
157,847	-	MPMX19_06636	0.42	+0.8
157,864	+	MPMX19_06636	0.44	+0.3
157,864	+	MPMX19_06636	0.44	+0.1
157,864	+	MPMX19_06636	0.44	-0.2
157,865	-	MPMX19_06636	0.45	-0.1
157,980	+	MPMX19_06636	0.62	-1.1
157,980	+	MPMX19_06636	0.62	-0.3
157,981	-	MPMX19_06636	0.62	-1.3
158,006	+	MPMX19_06636	0.66	-0.1
158,006	+	MPMX19_06636	0.66	+0.8
158,006	+	MPMX19_06636	0.66	+0.6
158,006	+	MPMX19_06636	0.66	-2.3
158,007	-	MPMX19_06636	0.66	-1.6
158,007	-	MPMX19_06636	0.66	-1.7
158,007	-	MPMX19_06636	0.66	-0.4
158,007	-	MPMX19_06636	0.66	+0.1
158,007	-	MPMX19_06636	0.66	+0.1
158,007	-	MPMX19_06636	0.66	+0.3
158,007	-	MPMX19_06636	0.66	-0.5
158,007	-	MPMX19_06636	0.66	-1.4
158,234	-			-1.3
158,234	-			-2.3
158,252	-			-1.6
158,252	-			-0.1
158,252	-			-0.9
158,335	+			-1.4
158,335	+			+0.3
158,335	+			-0.5
158,335	+			-0.1
158,335	+			-0.9
158,335	+			-1.4
158,335	+			-0.9
158,512	+			-1.9
158,512	+			-0.5
158,512	+			-1.1
158,512	+			-0.8
158,512	+			+0.7
158,512	+			+1.1
158,512	+			-0.4
158,512	+			-1.2
158,512	+			+0.4
158,512	+			-0.1
158,512	+			-0.9
158,513	-			-0.7
158,513	-			-0.1
158,513	-			-0.6
158,513	-			-0.2
158,513	-			+0.6
158,513	-			+0.2
158,513	-			-0.1
158,513	-			-0.4
158,513	-			-1.9
158,513	-			-2.9
158,513	-			-0.1
158,513	-			-0.0
158,513	-			-1.1
158,513	-			-0.1
158,513	-			-0.2
158,515	+			-2.1
158,515	+			-0.0
158,515	+			+0.5
158,515	+			-0.4
158,515	+			+0.1
158,515	+			-0.4
158,515	+			+1.1
158,515	+			-0.4
158,516	-			-0.4
158,516	-			-0.2
158,516	-			+0.4
158,516	-			-2.3
158,516	-			+0.3
158,516	-			-0.7
158,516	-			-0.8
158,516	-			-1.4

Or see this region's nucleotide sequence