Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06608 and MPMX19_06609 are separated by 247 nucleotides MPMX19_06609 and MPMX19_06610 are separated by 100 nucleotides MPMX19_06610 and MPMX19_06611 are separated by 216 nucleotides
MPMX19_06608: MPMX19_06608 - hypothetical protein, at 110,747 to 112,075
_06608
MPMX19_06609: MPMX19_06609 - hypothetical protein, at 112,323 to 113,924
_06609
MPMX19_06610: MPMX19_06610 - hypothetical protein, at 114,025 to 114,585
_06610
MPMX19_06611: MPMX19_06611 - Phosphoheptose isomerase, at 114,802 to 115,389
_06611
Position (kb) 112
113
114 Strain fitness (log2 ratio) -2
-1
0
1
2 at 111.369 kb on + strand, within MPMX19_06608 at 111.369 kb on + strand, within MPMX19_06608 at 111.369 kb on + strand, within MPMX19_06608 at 111.369 kb on + strand, within MPMX19_06608 at 111.369 kb on + strand, within MPMX19_06608 at 111.369 kb on + strand, within MPMX19_06608 at 111.369 kb on + strand, within MPMX19_06608 at 111.369 kb on + strand, within MPMX19_06608 at 111.369 kb on + strand, within MPMX19_06608 at 111.370 kb on - strand, within MPMX19_06608 at 111.370 kb on - strand, within MPMX19_06608 at 111.370 kb on - strand, within MPMX19_06608 at 111.370 kb on - strand, within MPMX19_06608 at 111.426 kb on + strand, within MPMX19_06608 at 111.427 kb on - strand, within MPMX19_06608 at 111.427 kb on - strand, within MPMX19_06608 at 111.438 kb on + strand, within MPMX19_06608 at 111.438 kb on + strand, within MPMX19_06608 at 111.438 kb on + strand, within MPMX19_06608 at 111.438 kb on + strand, within MPMX19_06608 at 111.438 kb on + strand, within MPMX19_06608 at 111.439 kb on - strand, within MPMX19_06608 at 111.439 kb on - strand, within MPMX19_06608 at 111.579 kb on + strand, within MPMX19_06608 at 111.579 kb on + strand, within MPMX19_06608 at 111.580 kb on - strand, within MPMX19_06608 at 111.580 kb on - strand, within MPMX19_06608 at 111.580 kb on - strand, within MPMX19_06608 at 111.825 kb on + strand, within MPMX19_06608 at 111.826 kb on - strand, within MPMX19_06608 at 111.826 kb on - strand, within MPMX19_06608 at 111.826 kb on - strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.852 kb on + strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.853 kb on - strand, within MPMX19_06608 at 111.954 kb on + strand at 111.954 kb on + strand at 111.954 kb on + strand at 111.954 kb on + strand at 111.955 kb on - strand at 111.955 kb on - strand at 111.955 kb on - strand at 111.955 kb on - strand at 111.955 kb on - strand at 111.955 kb on - strand at 111.955 kb on - strand at 111.955 kb on - strand at 111.955 kb on - strand at 111.955 kb on - strand at 111.955 kb on - strand at 112.132 kb on - strand at 112.132 kb on - strand at 112.132 kb on - strand at 112.132 kb on - strand at 112.132 kb on - strand at 112.132 kb on - strand at 112.132 kb on - strand at 112.132 kb on - strand at 112.132 kb on - strand at 112.132 kb on - strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.215 kb on + strand at 112.501 kb on + strand, within MPMX19_06609 at 112.561 kb on + strand, within MPMX19_06609 at 112.561 kb on + strand, within MPMX19_06609 at 112.561 kb on + strand, within MPMX19_06609 at 112.561 kb on + strand, within MPMX19_06609 at 112.562 kb on - strand, within MPMX19_06609 at 112.562 kb on - strand, within MPMX19_06609 at 112.562 kb on - strand, within MPMX19_06609 at 112.663 kb on + strand, within MPMX19_06609 at 112.664 kb on - strand, within MPMX19_06609 at 112.664 kb on - strand, within MPMX19_06609 at 112.664 kb on - strand, within MPMX19_06609 at 112.940 kb on - strand, within MPMX19_06609 at 112.940 kb on - strand, within MPMX19_06609 at 112.940 kb on - strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.161 kb on + strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.162 kb on - strand, within MPMX19_06609 at 113.377 kb on + strand, within MPMX19_06609 at 113.378 kb on - strand, within MPMX19_06609 at 113.378 kb on - strand, within MPMX19_06609 at 113.378 kb on - strand, within MPMX19_06609 at 113.378 kb on - strand, within MPMX19_06609 at 113.846 kb on - strand at 113.846 kb on - strand at 113.906 kb on + strand at 113.906 kb on + strand at 113.907 kb on - strand at 113.907 kb on - strand at 114.239 kb on + strand, within MPMX19_06610 at 114.239 kb on + strand, within MPMX19_06610 at 114.240 kb on - strand, within MPMX19_06610 at 114.240 kb on - strand, within MPMX19_06610 at 114.240 kb on - strand, within MPMX19_06610 at 114.240 kb on - strand, within MPMX19_06610 at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.539 kb on + strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.540 kb on - strand at 114.585 kb on + strand at 114.585 kb on + strand at 114.585 kb on + strand at 114.585 kb on + strand at 114.585 kb on + strand at 114.585 kb on + strand at 114.586 kb on - strand at 114.586 kb on - strand at 114.586 kb on - strand at 114.586 kb on - strand at 114.586 kb on - strand at 114.632 kb on - strand at 114.635 kb on + strand at 114.635 kb on + strand at 114.635 kb on + strand at 114.636 kb on - strand at 114.636 kb on - strand at 114.636 kb on - strand at 114.636 kb on - strand at 114.636 kb on - strand at 114.636 kb on - strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.703 kb on + strand at 114.704 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 111,369 + MPMX19_06608 0.47 +0.1 111,369 + MPMX19_06608 0.47 +0.1 111,369 + MPMX19_06608 0.47 +0.7 111,369 + MPMX19_06608 0.47 +0.7 111,369 + MPMX19_06608 0.47 -0.4 111,369 + MPMX19_06608 0.47 +0.5 111,369 + MPMX19_06608 0.47 -1.1 111,369 + MPMX19_06608 0.47 -0.8 111,369 + MPMX19_06608 0.47 +2.0 111,370 - MPMX19_06608 0.47 -0.1 111,370 - MPMX19_06608 0.47 +0.4 111,370 - MPMX19_06608 0.47 -0.6 111,370 - MPMX19_06608 0.47 -0.1 111,426 + MPMX19_06608 0.51 -0.4 111,427 - MPMX19_06608 0.51 +0.4 111,427 - MPMX19_06608 0.51 -1.2 111,438 + MPMX19_06608 0.52 +0.3 111,438 + MPMX19_06608 0.52 -0.1 111,438 + MPMX19_06608 0.52 -2.7 111,438 + MPMX19_06608 0.52 -1.3 111,438 + MPMX19_06608 0.52 -0.6 111,439 - MPMX19_06608 0.52 +0.4 111,439 - MPMX19_06608 0.52 -1.4 111,579 + MPMX19_06608 0.63 +0.1 111,579 + MPMX19_06608 0.63 +2.0 111,580 - MPMX19_06608 0.63 -0.2 111,580 - MPMX19_06608 0.63 -2.4 111,580 - MPMX19_06608 0.63 -2.3 111,825 + MPMX19_06608 0.81 -0.4 111,826 - MPMX19_06608 0.81 +1.9 111,826 - MPMX19_06608 0.81 +1.5 111,826 - MPMX19_06608 0.81 -1.7 111,852 + MPMX19_06608 0.83 -0.2 111,852 + MPMX19_06608 0.83 -0.5 111,852 + MPMX19_06608 0.83 -0.5 111,852 + MPMX19_06608 0.83 -0.2 111,852 + MPMX19_06608 0.83 -0.4 111,852 + MPMX19_06608 0.83 +0.4 111,852 + MPMX19_06608 0.83 -0.7 111,852 + MPMX19_06608 0.83 -1.9 111,852 + MPMX19_06608 0.83 -0.5 111,852 + MPMX19_06608 0.83 +0.5 111,852 + MPMX19_06608 0.83 -1.5 111,852 + MPMX19_06608 0.83 -0.1 111,853 - MPMX19_06608 0.83 -1.6 111,853 - MPMX19_06608 0.83 -0.6 111,853 - MPMX19_06608 0.83 -0.5 111,853 - MPMX19_06608 0.83 -0.1 111,853 - MPMX19_06608 0.83 -0.3 111,853 - MPMX19_06608 0.83 +0.1 111,853 - MPMX19_06608 0.83 -1.1 111,853 - MPMX19_06608 0.83 -0.0 111,853 - MPMX19_06608 0.83 -0.9 111,853 - MPMX19_06608 0.83 +0.4 111,954 + +1.3 111,954 + -0.4 111,954 + -0.3 111,954 + -0.4 111,955 - -1.1 111,955 - -1.1 111,955 - +2.1 111,955 - +0.6 111,955 - -1.8 111,955 - -0.3 111,955 - -1.2 111,955 - -0.4 111,955 - -0.4 111,955 - -0.3 111,955 - -0.0 112,132 - -0.3 112,132 - -1.3 112,132 - +0.3 112,132 - -0.5 112,132 - -0.8 112,132 - -0.1 112,132 - -1.9 112,132 - -0.4 112,132 - -0.9 112,132 - -1.7 112,215 + -1.2 112,215 + +0.5 112,215 + -0.8 112,215 + -1.3 112,215 + -0.9 112,215 + +0.3 112,215 + -0.7 112,215 + -0.0 112,215 + -0.8 112,215 + +1.1 112,215 + -0.1 112,215 + -0.3 112,215 + -1.4 112,215 + -0.9 112,501 + MPMX19_06609 0.11 +0.6 112,561 + MPMX19_06609 0.15 -1.5 112,561 + MPMX19_06609 0.15 -0.2 112,561 + MPMX19_06609 0.15 -0.0 112,561 + MPMX19_06609 0.15 -1.6 112,562 - MPMX19_06609 0.15 +0.5 112,562 - MPMX19_06609 0.15 +0.2 112,562 - MPMX19_06609 0.15 -0.4 112,663 + MPMX19_06609 0.21 -0.6 112,664 - MPMX19_06609 0.21 +1.1 112,664 - MPMX19_06609 0.21 +0.0 112,664 - MPMX19_06609 0.21 -0.9 112,940 - MPMX19_06609 0.39 -0.1 112,940 - MPMX19_06609 0.39 -1.5 112,940 - MPMX19_06609 0.39 +0.0 113,161 + MPMX19_06609 0.52 +0.6 113,161 + MPMX19_06609 0.52 -2.0 113,161 + MPMX19_06609 0.52 -0.6 113,161 + MPMX19_06609 0.52 +0.3 113,161 + MPMX19_06609 0.52 -0.9 113,161 + MPMX19_06609 0.52 -0.6 113,161 + MPMX19_06609 0.52 +1.0 113,161 + MPMX19_06609 0.52 -0.1 113,161 + MPMX19_06609 0.52 -0.3 113,161 + MPMX19_06609 0.52 +1.0 113,161 + MPMX19_06609 0.52 +0.3 113,161 + MPMX19_06609 0.52 +0.1 113,161 + MPMX19_06609 0.52 -0.6 113,161 + MPMX19_06609 0.52 -0.0 113,161 + MPMX19_06609 0.52 -0.4 113,161 + MPMX19_06609 0.52 +0.0 113,161 + MPMX19_06609 0.52 +0.9 113,161 + MPMX19_06609 0.52 -1.6 113,161 + MPMX19_06609 0.52 +0.4 113,161 + MPMX19_06609 0.52 +0.5 113,161 + MPMX19_06609 0.52 +0.9 113,161 + MPMX19_06609 0.52 -0.3 113,161 + MPMX19_06609 0.52 -0.1 113,162 - MPMX19_06609 0.52 +0.1 113,162 - MPMX19_06609 0.52 +0.1 113,162 - MPMX19_06609 0.52 -0.9 113,162 - MPMX19_06609 0.52 -0.4 113,162 - MPMX19_06609 0.52 +0.3 113,162 - MPMX19_06609 0.52 -0.1 113,162 - MPMX19_06609 0.52 +0.3 113,162 - MPMX19_06609 0.52 -0.7 113,162 - MPMX19_06609 0.52 -0.6 113,162 - MPMX19_06609 0.52 -0.9 113,162 - MPMX19_06609 0.52 +0.1 113,162 - MPMX19_06609 0.52 +0.0 113,162 - MPMX19_06609 0.52 -0.7 113,162 - MPMX19_06609 0.52 -0.4 113,162 - MPMX19_06609 0.52 +0.4 113,377 + MPMX19_06609 0.66 +1.2 113,378 - MPMX19_06609 0.66 -0.2 113,378 - MPMX19_06609 0.66 -0.7 113,378 - MPMX19_06609 0.66 -0.2 113,378 - MPMX19_06609 0.66 -0.9 113,846 - -0.2 113,846 - -0.3 113,906 + -2.1 113,906 + -0.4 113,907 - +0.1 113,907 - +0.1 114,239 + MPMX19_06610 0.38 -0.6 114,239 + MPMX19_06610 0.38 -0.4 114,240 - MPMX19_06610 0.38 +0.9 114,240 - MPMX19_06610 0.38 -0.6 114,240 - MPMX19_06610 0.38 +0.7 114,240 - MPMX19_06610 0.38 +0.4 114,539 + -0.6 114,539 + +0.4 114,539 + -1.1 114,539 + +0.1 114,539 + +0.3 114,539 + -1.4 114,539 + -1.7 114,539 + +0.7 114,539 + -0.5 114,539 + -1.5 114,539 + +0.5 114,539 + -0.7 114,539 + -0.4 114,539 + +0.7 114,540 - -1.9 114,540 - +0.4 114,540 - +0.1 114,540 - -0.4 114,540 - -0.3 114,540 - -1.9 114,540 - +0.6 114,540 - -1.4 114,540 - -0.2 114,540 - -1.9 114,540 - +0.3 114,585 + -1.6 114,585 + -0.9 114,585 + -0.4 114,585 + -0.9 114,585 + -0.2 114,585 + -0.4 114,586 - +0.7 114,586 - -0.5 114,586 - -1.1 114,586 - -0.1 114,586 - -0.9 114,632 - -0.6 114,635 + -1.1 114,635 + -1.1 114,635 + -0.4 114,636 - -0.6 114,636 - -2.3 114,636 - +0.4 114,636 - -2.0 114,636 - -0.4 114,636 - -1.9 114,703 + +0.7 114,703 + -1.7 114,703 + -1.1 114,703 + +1.3 114,703 + -1.1 114,703 + -0.0 114,703 + -0.4 114,703 + +0.1 114,703 + -0.8 114,703 + -0.7 114,703 + -1.1 114,704 - -0.5
Or see this region's nucleotide sequence