Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06578 and MPMX19_06579 overlap by 4 nucleotides MPMX19_06579 and MPMX19_06580 are separated by 8 nucleotides MPMX19_06580 and MPMX19_06581 are separated by 252 nucleotides
MPMX19_06578: MPMX19_06578 - hypothetical protein, at 51,411 to 52,430
_06578
MPMX19_06579: MPMX19_06579 - Carnitine monooxygenase oxygenase subunit, at 52,427 to 53,068
_06579
MPMX19_06580: MPMX19_06580 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 53,077 to 53,841
_06580
MPMX19_06581: MPMX19_06581 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2, at 54,094 to 55,188
_06581
Position (kb) 53
54 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 52.084 kb on + strand, within MPMX19_06578 at 52.084 kb on + strand, within MPMX19_06578 at 52.085 kb on - strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.306 kb on + strand, within MPMX19_06578 at 52.307 kb on - strand, within MPMX19_06578 at 52.307 kb on - strand, within MPMX19_06578 at 52.307 kb on - strand, within MPMX19_06578 at 52.307 kb on - strand, within MPMX19_06578 at 52.307 kb on - strand, within MPMX19_06578 at 52.307 kb on - strand, within MPMX19_06578 at 52.307 kb on - strand, within MPMX19_06578 at 52.307 kb on - strand, within MPMX19_06578 at 52.373 kb on + strand at 52.373 kb on + strand at 52.374 kb on - strand at 52.473 kb on + strand at 52.474 kb on - strand at 52.474 kb on - strand at 52.474 kb on - strand at 52.854 kb on + strand, within MPMX19_06579 at 52.854 kb on + strand, within MPMX19_06579 at 52.854 kb on + strand, within MPMX19_06579 at 52.855 kb on - strand, within MPMX19_06579 at 52.855 kb on - strand, within MPMX19_06579 at 52.898 kb on + strand, within MPMX19_06579 at 52.898 kb on + strand, within MPMX19_06579 at 52.899 kb on - strand, within MPMX19_06579 at 52.899 kb on - strand, within MPMX19_06579 at 53.147 kb on + strand at 53.147 kb on + strand at 53.147 kb on + strand at 53.147 kb on + strand at 53.147 kb on + strand at 53.147 kb on + strand at 53.147 kb on + strand at 53.148 kb on - strand at 53.148 kb on - strand at 53.148 kb on - strand at 53.148 kb on - strand at 53.148 kb on - strand at 53.148 kb on - strand at 53.216 kb on + strand, within MPMX19_06580 at 53.216 kb on + strand, within MPMX19_06580 at 53.216 kb on + strand, within MPMX19_06580 at 53.216 kb on + strand, within MPMX19_06580 at 53.216 kb on + strand, within MPMX19_06580 at 53.216 kb on + strand, within MPMX19_06580 at 53.217 kb on - strand, within MPMX19_06580 at 53.217 kb on - strand, within MPMX19_06580 at 53.217 kb on - strand, within MPMX19_06580 at 53.217 kb on - strand, within MPMX19_06580 at 53.217 kb on - strand, within MPMX19_06580 at 53.217 kb on - strand, within MPMX19_06580 at 53.217 kb on - strand, within MPMX19_06580 at 53.217 kb on - strand, within MPMX19_06580 at 53.366 kb on + strand, within MPMX19_06580 at 53.366 kb on + strand, within MPMX19_06580 at 53.366 kb on + strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.367 kb on - strand, within MPMX19_06580 at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.828 kb on + strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.829 kb on - strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.884 kb on + strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.885 kb on - strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.975 kb on + strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 53.976 kb on - strand at 54.024 kb on + strand at 54.024 kb on + strand at 54.024 kb on + strand at 54.024 kb on + strand at 54.024 kb on + strand at 54.025 kb on - strand at 54.025 kb on - strand at 54.025 kb on - strand at 54.256 kb on + strand, within MPMX19_06581 at 54.256 kb on + strand, within MPMX19_06581 at 54.256 kb on + strand, within MPMX19_06581 at 54.256 kb on + strand, within MPMX19_06581 at 54.257 kb on - strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.364 kb on + strand, within MPMX19_06581 at 54.365 kb on - strand, within MPMX19_06581 at 54.365 kb on - strand, within MPMX19_06581 at 54.365 kb on - strand, within MPMX19_06581 at 54.365 kb on - strand, within MPMX19_06581 at 54.365 kb on - strand, within MPMX19_06581 at 54.365 kb on - strand, within MPMX19_06581 at 54.365 kb on - strand, within MPMX19_06581 at 54.365 kb on - strand, within MPMX19_06581 at 54.365 kb on - strand, within MPMX19_06581 at 54.457 kb on + strand, within MPMX19_06581 at 54.457 kb on + strand, within MPMX19_06581 at 54.457 kb on + strand, within MPMX19_06581 at 54.457 kb on + strand, within MPMX19_06581 at 54.457 kb on + strand, within MPMX19_06581 at 54.458 kb on - strand, within MPMX19_06581 at 54.458 kb on - strand, within MPMX19_06581 at 54.458 kb on - strand, within MPMX19_06581 at 54.458 kb on - strand, within MPMX19_06581 at 54.458 kb on - strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.463 kb on + strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.464 kb on - strand, within MPMX19_06581 at 54.708 kb on + strand, within MPMX19_06581 at 54.708 kb on + strand, within MPMX19_06581 at 54.709 kb on - strand, within MPMX19_06581 at 54.709 kb on - strand, within MPMX19_06581 at 54.709 kb on - strand, within MPMX19_06581 at 54.709 kb on - strand, within MPMX19_06581
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 52,084 + MPMX19_06578 0.66 -1.2 52,084 + MPMX19_06578 0.66 -0.9 52,085 - MPMX19_06578 0.66 -0.5 52,306 + MPMX19_06578 0.88 -1.1 52,306 + MPMX19_06578 0.88 +0.7 52,306 + MPMX19_06578 0.88 -0.2 52,306 + MPMX19_06578 0.88 +0.1 52,306 + MPMX19_06578 0.88 -0.9 52,306 + MPMX19_06578 0.88 -1.1 52,306 + MPMX19_06578 0.88 -0.1 52,306 + MPMX19_06578 0.88 -0.4 52,306 + MPMX19_06578 0.88 +0.7 52,306 + MPMX19_06578 0.88 -0.1 52,306 + MPMX19_06578 0.88 +0.5 52,306 + MPMX19_06578 0.88 +0.9 52,306 + MPMX19_06578 0.88 -1.4 52,306 + MPMX19_06578 0.88 -1.1 52,306 + MPMX19_06578 0.88 -1.7 52,307 - MPMX19_06578 0.88 +0.1 52,307 - MPMX19_06578 0.88 -0.9 52,307 - MPMX19_06578 0.88 -0.9 52,307 - MPMX19_06578 0.88 +0.5 52,307 - MPMX19_06578 0.88 -1.5 52,307 - MPMX19_06578 0.88 -0.4 52,307 - MPMX19_06578 0.88 -0.6 52,307 - MPMX19_06578 0.88 -1.1 52,373 + -1.6 52,373 + -1.7 52,374 - -0.3 52,473 + +0.3 52,474 - -0.8 52,474 - +0.3 52,474 - +0.1 52,854 + MPMX19_06579 0.67 -1.4 52,854 + MPMX19_06579 0.67 -0.7 52,854 + MPMX19_06579 0.67 -0.3 52,855 - MPMX19_06579 0.67 +0.2 52,855 - MPMX19_06579 0.67 +0.1 52,898 + MPMX19_06579 0.73 +0.4 52,898 + MPMX19_06579 0.73 -0.2 52,899 - MPMX19_06579 0.74 -0.5 52,899 - MPMX19_06579 0.74 -2.1 53,147 + -1.4 53,147 + -0.9 53,147 + -3.7 53,147 + -1.3 53,147 + -1.0 53,147 + -1.1 53,147 + -0.8 53,148 - -0.7 53,148 - -0.7 53,148 - -1.7 53,148 - -0.8 53,148 - -2.3 53,148 - -0.6 53,216 + MPMX19_06580 0.18 -0.6 53,216 + MPMX19_06580 0.18 -1.9 53,216 + MPMX19_06580 0.18 +0.1 53,216 + MPMX19_06580 0.18 -0.6 53,216 + MPMX19_06580 0.18 -2.1 53,216 + MPMX19_06580 0.18 -1.1 53,217 - MPMX19_06580 0.18 -1.0 53,217 - MPMX19_06580 0.18 +1.0 53,217 - MPMX19_06580 0.18 -0.3 53,217 - MPMX19_06580 0.18 -0.1 53,217 - MPMX19_06580 0.18 -1.7 53,217 - MPMX19_06580 0.18 -1.6 53,217 - MPMX19_06580 0.18 +0.1 53,217 - MPMX19_06580 0.18 -2.6 53,366 + MPMX19_06580 0.38 -0.1 53,366 + MPMX19_06580 0.38 +0.5 53,366 + MPMX19_06580 0.38 -2.5 53,367 - MPMX19_06580 0.38 -1.0 53,367 - MPMX19_06580 0.38 -0.1 53,367 - MPMX19_06580 0.38 -2.5 53,367 - MPMX19_06580 0.38 +0.1 53,367 - MPMX19_06580 0.38 +0.1 53,367 - MPMX19_06580 0.38 -0.8 53,367 - MPMX19_06580 0.38 -0.3 53,367 - MPMX19_06580 0.38 -0.1 53,367 - MPMX19_06580 0.38 -1.9 53,367 - MPMX19_06580 0.38 -2.0 53,828 + -0.7 53,828 + -0.3 53,828 + -0.9 53,828 + -0.6 53,828 + -2.3 53,828 + -0.6 53,828 + -1.3 53,828 + -2.4 53,828 + -2.4 53,828 + +1.3 53,828 + -0.4 53,828 + -1.0 53,828 + -1.9 53,828 + -0.3 53,828 + +0.1 53,829 - -1.2 53,829 - -0.8 53,829 - -0.8 53,829 - +0.5 53,829 - -0.3 53,829 - -0.8 53,829 - -0.9 53,829 - -1.9 53,829 - -0.1 53,829 - -0.2 53,829 - -1.3 53,829 - +0.6 53,829 - -0.5 53,829 - -0.2 53,829 - -0.3 53,829 - -0.1 53,829 - -1.6 53,829 - +1.7 53,829 - -0.2 53,829 - -1.2 53,884 + -0.4 53,884 + -1.4 53,884 + -0.9 53,884 + -1.1 53,884 + +0.3 53,884 + -1.4 53,884 + -0.8 53,884 + -0.9 53,884 + +0.9 53,884 + -0.3 53,884 + +0.5 53,884 + -0.4 53,884 + +0.6 53,884 + -0.6 53,884 + -0.3 53,884 + -0.4 53,884 + -3.1 53,884 + +0.7 53,884 + -0.4 53,885 - +0.1 53,885 - +0.4 53,885 - -1.2 53,885 - -2.2 53,885 - +1.2 53,885 - +0.0 53,885 - +0.5 53,885 - -0.1 53,885 - -1.4 53,885 - -1.9 53,885 - +1.5 53,885 - +1.1 53,885 - -0.1 53,885 - -0.4 53,885 - -0.0 53,885 - -0.8 53,885 - -1.0 53,885 - -0.4 53,885 - -0.6 53,885 - -1.9 53,885 - -0.1 53,885 - -1.2 53,885 - -0.4 53,975 + -1.3 53,975 + +0.5 53,975 + -1.5 53,975 + +0.0 53,975 + -0.1 53,975 + -0.7 53,975 + -0.9 53,975 + +0.9 53,975 + +0.0 53,975 + +1.2 53,975 + +0.1 53,975 + +0.2 53,975 + -0.6 53,975 + -1.7 53,975 + -1.6 53,975 + -1.9 53,975 + +1.7 53,975 + +1.4 53,975 + -1.0 53,975 + -0.8 53,975 + +0.5 53,975 + -0.6 53,975 + +0.0 53,975 + -1.5 53,975 + +0.3 53,975 + -0.2 53,975 + +0.5 53,975 + -0.2 53,975 + -0.1 53,975 + +0.4 53,975 + -1.0 53,976 - -0.2 53,976 - -0.6 53,976 - -1.3 53,976 - -0.4 53,976 - +0.7 53,976 - -2.0 53,976 - -1.4 53,976 - -0.1 53,976 - -0.1 53,976 - -1.3 53,976 - -0.2 53,976 - -0.4 53,976 - -1.3 53,976 - -0.6 53,976 - -0.0 53,976 - -1.6 53,976 - +0.5 53,976 - -1.6 53,976 - -1.0 53,976 - -1.3 53,976 - +0.2 53,976 - +0.9 53,976 - -0.1 53,976 - -0.2 53,976 - -1.0 53,976 - +0.7 53,976 - -0.3 53,976 - +0.5 54,024 + -0.8 54,024 + -0.5 54,024 + -1.5 54,024 + +1.2 54,024 + +1.1 54,025 - -0.7 54,025 - -2.4 54,025 - -0.0 54,256 + MPMX19_06581 0.15 -0.5 54,256 + MPMX19_06581 0.15 +0.4 54,256 + MPMX19_06581 0.15 -1.3 54,256 + MPMX19_06581 0.15 -2.4 54,257 - MPMX19_06581 0.15 -1.1 54,364 + MPMX19_06581 0.25 -2.2 54,364 + MPMX19_06581 0.25 +0.0 54,364 + MPMX19_06581 0.25 -1.7 54,364 + MPMX19_06581 0.25 -2.5 54,364 + MPMX19_06581 0.25 -0.1 54,364 + MPMX19_06581 0.25 -0.7 54,364 + MPMX19_06581 0.25 -2.0 54,364 + MPMX19_06581 0.25 -1.0 54,364 + MPMX19_06581 0.25 -1.1 54,364 + MPMX19_06581 0.25 +1.1 54,364 + MPMX19_06581 0.25 -0.0 54,364 + MPMX19_06581 0.25 -0.7 54,364 + MPMX19_06581 0.25 -1.1 54,365 - MPMX19_06581 0.25 +0.8 54,365 - MPMX19_06581 0.25 +0.4 54,365 - MPMX19_06581 0.25 -0.4 54,365 - MPMX19_06581 0.25 -3.1 54,365 - MPMX19_06581 0.25 -0.3 54,365 - MPMX19_06581 0.25 +0.4 54,365 - MPMX19_06581 0.25 -1.4 54,365 - MPMX19_06581 0.25 -0.6 54,365 - MPMX19_06581 0.25 -0.4 54,457 + MPMX19_06581 0.33 -2.4 54,457 + MPMX19_06581 0.33 -1.3 54,457 + MPMX19_06581 0.33 -1.1 54,457 + MPMX19_06581 0.33 -1.3 54,457 + MPMX19_06581 0.33 -2.5 54,458 - MPMX19_06581 0.33 +1.5 54,458 - MPMX19_06581 0.33 -1.7 54,458 - MPMX19_06581 0.33 -0.4 54,458 - MPMX19_06581 0.33 -2.2 54,458 - MPMX19_06581 0.33 -2.0 54,463 + MPMX19_06581 0.34 +0.0 54,463 + MPMX19_06581 0.34 -0.9 54,463 + MPMX19_06581 0.34 +1.5 54,463 + MPMX19_06581 0.34 +0.6 54,463 + MPMX19_06581 0.34 -1.1 54,463 + MPMX19_06581 0.34 -1.3 54,463 + MPMX19_06581 0.34 -0.5 54,463 + MPMX19_06581 0.34 -2.8 54,463 + MPMX19_06581 0.34 -1.3 54,463 + MPMX19_06581 0.34 -1.0 54,463 + MPMX19_06581 0.34 -0.4 54,464 - MPMX19_06581 0.34 -0.3 54,464 - MPMX19_06581 0.34 -0.9 54,464 - MPMX19_06581 0.34 +0.1 54,464 - MPMX19_06581 0.34 +0.8 54,464 - MPMX19_06581 0.34 -0.5 54,464 - MPMX19_06581 0.34 -2.3 54,464 - MPMX19_06581 0.34 -0.9 54,464 - MPMX19_06581 0.34 +0.7 54,464 - MPMX19_06581 0.34 +0.3 54,464 - MPMX19_06581 0.34 -0.2 54,464 - MPMX19_06581 0.34 +0.3 54,464 - MPMX19_06581 0.34 -0.7 54,708 + MPMX19_06581 0.56 -1.1 54,708 + MPMX19_06581 0.56 -1.0 54,709 - MPMX19_06581 0.56 +0.3 54,709 - MPMX19_06581 0.56 +0.3 54,709 - MPMX19_06581 0.56 -1.6 54,709 - MPMX19_06581 0.56 -0.9
Or see this region's nucleotide sequence