Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06574 and MPMX19_06575 are separated by 427 nucleotides MPMX19_06575 and MPMX19_06576 are separated by 931 nucleotides
MPMX19_06574: MPMX19_06574 - Carnitine monooxygenase oxygenase subunit, at 47,095 to 48,294
_06574
MPMX19_06575: MPMX19_06575 - hypothetical protein, at 48,722 to 49,558
_06575
MPMX19_06576: MPMX19_06576 - hypothetical protein, at 50,490 to 50,735
_06576
Position (kb) 48
49
50 Strain fitness (log2 ratio) -2
-1
0
1
2 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.776 kb on + strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.777 kb on - strand, within MPMX19_06574 at 47.842 kb on + strand, within MPMX19_06574 at 47.842 kb on + strand, within MPMX19_06574 at 47.842 kb on + strand, within MPMX19_06574 at 47.843 kb on - strand, within MPMX19_06574 at 47.843 kb on - strand, within MPMX19_06574 at 47.843 kb on - strand, within MPMX19_06574 at 47.843 kb on - strand, within MPMX19_06574 at 47.843 kb on - strand, within MPMX19_06574 at 47.953 kb on + strand, within MPMX19_06574 at 47.953 kb on + strand, within MPMX19_06574 at 47.953 kb on + strand, within MPMX19_06574 at 47.953 kb on + strand, within MPMX19_06574 at 47.953 kb on + strand, within MPMX19_06574 at 47.953 kb on + strand, within MPMX19_06574 at 47.953 kb on + strand, within MPMX19_06574 at 47.954 kb on - strand, within MPMX19_06574 at 47.954 kb on - strand, within MPMX19_06574 at 47.954 kb on - strand, within MPMX19_06574 at 47.954 kb on - strand, within MPMX19_06574 at 47.954 kb on - strand, within MPMX19_06574 at 47.954 kb on - strand, within MPMX19_06574 at 47.954 kb on - strand, within MPMX19_06574 at 47.954 kb on - strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.025 kb on + strand, within MPMX19_06574 at 48.026 kb on - strand, within MPMX19_06574 at 48.026 kb on - strand, within MPMX19_06574 at 48.320 kb on + strand at 48.320 kb on + strand at 48.320 kb on + strand at 48.321 kb on - strand at 48.321 kb on - strand at 48.321 kb on - strand at 48.321 kb on - strand at 48.321 kb on - strand at 48.321 kb on - strand at 48.321 kb on - strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.385 kb on + strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.386 kb on - strand at 48.425 kb on + strand at 48.425 kb on + strand at 48.426 kb on - strand at 48.426 kb on - strand at 48.550 kb on + strand at 48.551 kb on - strand at 48.559 kb on - strand at 48.559 kb on - strand at 48.567 kb on + strand at 48.646 kb on + strand at 48.691 kb on + strand at 48.710 kb on - strand at 48.727 kb on + strand at 48.752 kb on + strand at 48.752 kb on + strand at 48.819 kb on + strand, within MPMX19_06575 at 48.820 kb on - strand, within MPMX19_06575 at 48.833 kb on + strand, within MPMX19_06575 at 48.833 kb on + strand, within MPMX19_06575 at 48.833 kb on + strand, within MPMX19_06575 at 48.834 kb on - strand, within MPMX19_06575 at 48.837 kb on + strand, within MPMX19_06575 at 48.837 kb on + strand, within MPMX19_06575 at 48.837 kb on + strand, within MPMX19_06575 at 48.921 kb on + strand, within MPMX19_06575 at 48.922 kb on - strand, within MPMX19_06575 at 48.922 kb on - strand, within MPMX19_06575 at 48.956 kb on - strand, within MPMX19_06575 at 48.956 kb on - strand, within MPMX19_06575 at 48.989 kb on + strand, within MPMX19_06575 at 48.989 kb on + strand, within MPMX19_06575 at 48.989 kb on + strand, within MPMX19_06575 at 49.004 kb on + strand, within MPMX19_06575 at 49.004 kb on + strand, within MPMX19_06575 at 49.005 kb on - strand, within MPMX19_06575 at 49.005 kb on - strand, within MPMX19_06575 at 49.074 kb on - strand, within MPMX19_06575 at 49.074 kb on - strand, within MPMX19_06575 at 49.087 kb on + strand, within MPMX19_06575 at 49.088 kb on - strand, within MPMX19_06575 at 49.088 kb on - strand, within MPMX19_06575 at 49.094 kb on + strand, within MPMX19_06575 at 49.095 kb on - strand, within MPMX19_06575 at 49.095 kb on - strand, within MPMX19_06575 at 49.114 kb on + strand, within MPMX19_06575 at 49.115 kb on - strand, within MPMX19_06575 at 49.141 kb on + strand, within MPMX19_06575 at 49.143 kb on + strand, within MPMX19_06575 at 49.144 kb on - strand, within MPMX19_06575 at 49.150 kb on + strand, within MPMX19_06575 at 49.179 kb on + strand, within MPMX19_06575 at 49.179 kb on + strand, within MPMX19_06575 at 49.179 kb on + strand, within MPMX19_06575 at 49.180 kb on - strand, within MPMX19_06575 at 49.180 kb on - strand, within MPMX19_06575 at 49.180 kb on - strand, within MPMX19_06575 at 49.287 kb on + strand, within MPMX19_06575 at 49.288 kb on - strand, within MPMX19_06575 at 49.354 kb on + strand, within MPMX19_06575 at 49.406 kb on + strand, within MPMX19_06575 at 49.418 kb on - strand, within MPMX19_06575 at 49.420 kb on + strand, within MPMX19_06575 at 49.420 kb on + strand, within MPMX19_06575 at 49.439 kb on + strand, within MPMX19_06575 at 49.439 kb on + strand, within MPMX19_06575 at 49.442 kb on - strand, within MPMX19_06575 at 49.606 kb on - strand at 49.710 kb on + strand at 49.711 kb on - strand at 49.711 kb on - strand at 49.715 kb on + strand at 49.715 kb on + strand at 49.716 kb on - strand at 49.716 kb on - strand at 49.716 kb on - strand at 49.716 kb on - strand at 49.732 kb on - strand at 49.801 kb on - strand at 49.801 kb on - strand at 49.970 kb on + strand at 49.970 kb on + strand at 49.970 kb on + strand at 49.970 kb on + strand at 49.970 kb on + strand at 49.970 kb on + strand at 49.970 kb on + strand at 49.970 kb on + strand at 49.971 kb on - strand at 49.971 kb on - strand at 49.971 kb on - strand at 49.971 kb on - strand at 49.971 kb on - strand at 49.971 kb on - strand at 49.971 kb on - strand at 49.971 kb on - strand at 50.032 kb on - strand at 50.164 kb on + strand at 50.164 kb on + strand at 50.164 kb on + strand at 50.165 kb on - strand at 50.165 kb on - strand at 50.165 kb on - strand at 50.165 kb on - strand at 50.165 kb on - strand at 50.362 kb on + strand at 50.362 kb on + strand at 50.362 kb on + strand at 50.362 kb on + strand at 50.362 kb on + strand at 50.362 kb on + strand at 50.362 kb on + strand at 50.362 kb on + strand at 50.362 kb on + strand at 50.363 kb on - strand at 50.363 kb on - strand at 50.363 kb on - strand at 50.363 kb on - strand at 50.363 kb on - strand at 50.389 kb on + strand at 50.389 kb on + strand at 50.389 kb on + strand at 50.389 kb on + strand at 50.389 kb on + strand at 50.389 kb on + strand at 50.389 kb on + strand at 50.390 kb on - strand at 50.390 kb on - strand at 50.390 kb on - strand at 50.390 kb on - strand at 50.465 kb on + strand at 50.465 kb on + strand at 50.477 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 47,776 + MPMX19_06574 0.57 +0.6 47,776 + MPMX19_06574 0.57 +0.3 47,776 + MPMX19_06574 0.57 -0.1 47,776 + MPMX19_06574 0.57 +0.4 47,776 + MPMX19_06574 0.57 -0.3 47,776 + MPMX19_06574 0.57 -0.6 47,776 + MPMX19_06574 0.57 +0.4 47,776 + MPMX19_06574 0.57 -0.1 47,776 + MPMX19_06574 0.57 -0.1 47,776 + MPMX19_06574 0.57 +0.7 47,776 + MPMX19_06574 0.57 -0.4 47,776 + MPMX19_06574 0.57 -1.4 47,776 + MPMX19_06574 0.57 -0.6 47,776 + MPMX19_06574 0.57 +1.1 47,776 + MPMX19_06574 0.57 -2.6 47,776 + MPMX19_06574 0.57 -0.4 47,776 + MPMX19_06574 0.57 -0.1 47,776 + MPMX19_06574 0.57 -0.2 47,776 + MPMX19_06574 0.57 +0.1 47,776 + MPMX19_06574 0.57 -1.0 47,776 + MPMX19_06574 0.57 -0.7 47,776 + MPMX19_06574 0.57 +0.6 47,777 - MPMX19_06574 0.57 -1.6 47,777 - MPMX19_06574 0.57 -0.5 47,777 - MPMX19_06574 0.57 -0.1 47,777 - MPMX19_06574 0.57 -0.8 47,777 - MPMX19_06574 0.57 -0.1 47,777 - MPMX19_06574 0.57 -0.9 47,777 - MPMX19_06574 0.57 +0.1 47,777 - MPMX19_06574 0.57 -0.0 47,777 - MPMX19_06574 0.57 -0.7 47,777 - MPMX19_06574 0.57 -0.6 47,777 - MPMX19_06574 0.57 -0.1 47,777 - MPMX19_06574 0.57 +1.0 47,842 + MPMX19_06574 0.62 -2.3 47,842 + MPMX19_06574 0.62 -0.7 47,842 + MPMX19_06574 0.62 -0.2 47,843 - MPMX19_06574 0.62 -1.3 47,843 - MPMX19_06574 0.62 +0.3 47,843 - MPMX19_06574 0.62 +1.0 47,843 - MPMX19_06574 0.62 -0.3 47,843 - MPMX19_06574 0.62 +0.1 47,953 + MPMX19_06574 0.71 -0.4 47,953 + MPMX19_06574 0.71 -0.9 47,953 + MPMX19_06574 0.71 +0.7 47,953 + MPMX19_06574 0.71 -0.5 47,953 + MPMX19_06574 0.71 -1.7 47,953 + MPMX19_06574 0.71 -0.4 47,953 + MPMX19_06574 0.71 -1.3 47,954 - MPMX19_06574 0.72 -1.4 47,954 - MPMX19_06574 0.72 -1.1 47,954 - MPMX19_06574 0.72 +0.1 47,954 - MPMX19_06574 0.72 -0.6 47,954 - MPMX19_06574 0.72 +0.8 47,954 - MPMX19_06574 0.72 +0.9 47,954 - MPMX19_06574 0.72 -0.4 47,954 - MPMX19_06574 0.72 -0.5 48,025 + MPMX19_06574 0.78 -0.1 48,025 + MPMX19_06574 0.78 +0.5 48,025 + MPMX19_06574 0.78 -0.3 48,025 + MPMX19_06574 0.78 -0.4 48,025 + MPMX19_06574 0.78 -1.4 48,025 + MPMX19_06574 0.78 -0.5 48,025 + MPMX19_06574 0.78 -0.7 48,025 + MPMX19_06574 0.78 -1.4 48,025 + MPMX19_06574 0.78 +0.1 48,025 + MPMX19_06574 0.78 +0.4 48,025 + MPMX19_06574 0.78 -0.4 48,025 + MPMX19_06574 0.78 -0.2 48,025 + MPMX19_06574 0.78 -0.4 48,025 + MPMX19_06574 0.78 -1.4 48,026 - MPMX19_06574 0.78 +0.1 48,026 - MPMX19_06574 0.78 -2.1 48,320 + -1.4 48,320 + -1.2 48,320 + +0.5 48,321 - -0.3 48,321 - -0.9 48,321 - -0.1 48,321 - +2.1 48,321 - -0.2 48,321 - +1.1 48,321 - +0.2 48,385 + -1.1 48,385 + +0.4 48,385 + -2.0 48,385 + -1.3 48,385 + -1.9 48,385 + -1.0 48,385 + -1.1 48,385 + -0.7 48,385 + +0.3 48,385 + +1.1 48,385 + -0.3 48,385 + -1.0 48,385 + +0.4 48,385 + -0.9 48,385 + -0.3 48,385 + +0.1 48,385 + -0.0 48,385 + -0.8 48,385 + -1.4 48,385 + -1.6 48,385 + -0.9 48,385 + -0.3 48,385 + +0.7 48,386 - -0.3 48,386 - -0.2 48,386 - +0.1 48,386 - -0.6 48,386 - +0.5 48,386 - -0.3 48,386 - -1.1 48,386 - -0.6 48,386 - -1.7 48,386 - -2.0 48,386 - +2.3 48,386 - -1.2 48,386 - +0.3 48,386 - -1.5 48,386 - +0.7 48,386 - +1.1 48,386 - -1.4 48,386 - -0.1 48,386 - +0.1 48,386 - -1.9 48,386 - -0.3 48,386 - -2.3 48,425 + -0.0 48,425 + +0.7 48,426 - -0.3 48,426 - -1.4 48,550 + -1.3 48,551 - -1.2 48,559 - -1.9 48,559 - -0.9 48,567 + +0.0 48,646 + -0.9 48,691 + +0.9 48,710 - +0.6 48,727 + -1.4 48,752 + +0.7 48,752 + -0.6 48,819 + MPMX19_06575 0.12 -0.1 48,820 - MPMX19_06575 0.12 -1.0 48,833 + MPMX19_06575 0.13 -0.7 48,833 + MPMX19_06575 0.13 +0.1 48,833 + MPMX19_06575 0.13 -0.4 48,834 - MPMX19_06575 0.13 -0.4 48,837 + MPMX19_06575 0.14 +0.4 48,837 + MPMX19_06575 0.14 -0.3 48,837 + MPMX19_06575 0.14 -0.6 48,921 + MPMX19_06575 0.24 +0.3 48,922 - MPMX19_06575 0.24 -0.7 48,922 - MPMX19_06575 0.24 -1.0 48,956 - MPMX19_06575 0.28 -0.3 48,956 - MPMX19_06575 0.28 +0.4 48,989 + MPMX19_06575 0.32 -0.7 48,989 + MPMX19_06575 0.32 -1.3 48,989 + MPMX19_06575 0.32 -0.9 49,004 + MPMX19_06575 0.34 +0.7 49,004 + MPMX19_06575 0.34 -0.9 49,005 - MPMX19_06575 0.34 -1.1 49,005 - MPMX19_06575 0.34 -1.0 49,074 - MPMX19_06575 0.42 -0.3 49,074 - MPMX19_06575 0.42 -0.4 49,087 + MPMX19_06575 0.44 +0.7 49,088 - MPMX19_06575 0.44 -0.9 49,088 - MPMX19_06575 0.44 -2.5 49,094 + MPMX19_06575 0.44 -1.4 49,095 - MPMX19_06575 0.45 -2.6 49,095 - MPMX19_06575 0.45 -0.7 49,114 + MPMX19_06575 0.47 +0.1 49,115 - MPMX19_06575 0.47 +0.6 49,141 + MPMX19_06575 0.50 -1.0 49,143 + MPMX19_06575 0.50 -0.9 49,144 - MPMX19_06575 0.50 -2.0 49,150 + MPMX19_06575 0.51 -1.3 49,179 + MPMX19_06575 0.55 -0.7 49,179 + MPMX19_06575 0.55 -0.6 49,179 + MPMX19_06575 0.55 -1.6 49,180 - MPMX19_06575 0.55 +0.7 49,180 - MPMX19_06575 0.55 -1.5 49,180 - MPMX19_06575 0.55 -0.3 49,287 + MPMX19_06575 0.68 -0.4 49,288 - MPMX19_06575 0.68 +0.4 49,354 + MPMX19_06575 0.76 +0.7 49,406 + MPMX19_06575 0.82 -1.9 49,418 - MPMX19_06575 0.83 -0.8 49,420 + MPMX19_06575 0.83 +0.3 49,420 + MPMX19_06575 0.83 -1.7 49,439 + MPMX19_06575 0.86 -0.6 49,439 + MPMX19_06575 0.86 +0.1 49,442 - MPMX19_06575 0.86 -1.3 49,606 - -2.4 49,710 + -0.1 49,711 - -1.4 49,711 - -0.3 49,715 + -0.1 49,715 + -0.3 49,716 - -0.3 49,716 - -1.3 49,716 - -0.6 49,716 - -0.1 49,732 - -1.9 49,801 - -1.3 49,801 - +0.1 49,970 + -1.9 49,970 + +0.7 49,970 + -0.3 49,970 + +0.1 49,970 + -0.0 49,970 + +0.3 49,970 + -0.2 49,970 + -1.4 49,971 - +0.2 49,971 - -0.2 49,971 - -1.0 49,971 - -0.6 49,971 - -0.9 49,971 - +0.6 49,971 - -1.5 49,971 - -0.4 50,032 - +0.4 50,164 + -0.3 50,164 + -1.2 50,164 + -0.1 50,165 - +0.1 50,165 - -0.8 50,165 - -0.2 50,165 - -0.2 50,165 - -0.9 50,362 + -0.4 50,362 + +0.1 50,362 + -1.4 50,362 + -0.3 50,362 + -0.4 50,362 + -0.0 50,362 + -0.4 50,362 + -0.1 50,362 + -0.4 50,363 - -0.5 50,363 - -0.2 50,363 - +0.3 50,363 - -0.0 50,363 - -0.6 50,389 + -2.6 50,389 + -0.8 50,389 + -0.5 50,389 + +0.0 50,389 + -0.4 50,389 + -1.8 50,389 + -1.6 50,390 - -0.0 50,390 - -1.5 50,390 - +0.1 50,390 - -2.1 50,465 + -0.5 50,465 + -1.2 50,477 - +1.4
Or see this region's nucleotide sequence