Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06488 and MPMX19_06489 are separated by 25 nucleotides MPMX19_06489 and MPMX19_06490 overlap by 4 nucleotides MPMX19_06490 and MPMX19_06491 are separated by 54 nucleotides
MPMX19_06488: MPMX19_06488 - Taurine-binding periplasmic protein, at 271,441 to 272,457
_06488
MPMX19_06489: MPMX19_06489 - Taurine import ATP-binding protein TauB, at 272,483 to 273,286
_06489
MPMX19_06490: MPMX19_06490 - Putative aliphatic sulfonates transport permease protein SsuC, at 273,283 to 274,134
_06490
MPMX19_06491: MPMX19_06491 - Alpha-ketoglutarate-dependent taurine dioxygenase, at 274,189 to 275,040
_06491
Position (kb) 272
273
274 Strain fitness (log2 ratio) -1
0
1
2 at 271.690 kb on + strand, within MPMX19_06488 at 271.690 kb on + strand, within MPMX19_06488 at 271.690 kb on + strand, within MPMX19_06488 at 272.158 kb on + strand, within MPMX19_06488 at 272.158 kb on + strand, within MPMX19_06488 at 272.159 kb on - strand, within MPMX19_06488 at 272.159 kb on - strand, within MPMX19_06488 at 272.347 kb on - strand, within MPMX19_06488 at 272.437 kb on + strand at 272.437 kb on + strand at 272.437 kb on + strand at 272.437 kb on + strand at 272.672 kb on - strand, within MPMX19_06489 at 272.672 kb on - strand, within MPMX19_06489 at 272.672 kb on - strand, within MPMX19_06489 at 273.215 kb on + strand at 273.215 kb on + strand at 273.215 kb on + strand at 273.216 kb on - strand at 273.216 kb on - strand at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.909 kb on - strand, within MPMX19_06490
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 271,690 + MPMX19_06488 0.24 -0.2 271,690 + MPMX19_06488 0.24 -0.2 271,690 + MPMX19_06488 0.24 +0.1 272,158 + MPMX19_06488 0.71 -1.4 272,158 + MPMX19_06488 0.71 +0.9 272,159 - MPMX19_06488 0.71 +0.6 272,159 - MPMX19_06488 0.71 +2.2 272,347 - MPMX19_06488 0.89 -0.3 272,437 + +0.4 272,437 + +0.7 272,437 + +0.1 272,437 + +0.2 272,672 - MPMX19_06489 0.24 +0.7 272,672 - MPMX19_06489 0.24 +0.9 272,672 - MPMX19_06489 0.24 +0.6 273,215 + -1.7 273,215 + -0.2 273,215 + +0.5 273,216 - -1.3 273,216 - +0.6 273,521 - MPMX19_06490 0.28 -0.1 273,521 - MPMX19_06490 0.28 +0.7 273,521 - MPMX19_06490 0.28 +0.0 273,521 - MPMX19_06490 0.28 -0.8 273,521 - MPMX19_06490 0.28 -0.7 273,521 - MPMX19_06490 0.28 -0.4 273,909 - MPMX19_06490 0.73 +1.9
Or see this region's nucleotide sequence