Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06332 and MPMX19_06333 overlap by 14 nucleotides MPMX19_06333 and MPMX19_06334 are separated by 212 nucleotides MPMX19_06334 and MPMX19_06335 are separated by 11 nucleotides
MPMX19_06332: MPMX19_06332 - hypothetical protein, at 99,074 to 100,543
_06332
MPMX19_06333: MPMX19_06333 - Regulatory protein AtoC, at 100,530 to 101,867
_06333
MPMX19_06334: MPMX19_06334 - Arsenite oxidase subunit AioB, at 102,080 to 102,634
_06334
MPMX19_06335: MPMX19_06335 - Arsenite oxidase subunit AioA, at 102,646 to 105,114
_06335
Position (kb) 100
101
102 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 99.648 kb on - strand, within MPMX19_06332 at 99.743 kb on + strand, within MPMX19_06332 at 99.743 kb on + strand, within MPMX19_06332 at 99.744 kb on - strand, within MPMX19_06332 at 99.779 kb on + strand, within MPMX19_06332 at 99.780 kb on - strand, within MPMX19_06332 at 99.938 kb on - strand, within MPMX19_06332 at 100.046 kb on + strand, within MPMX19_06332 at 100.046 kb on + strand, within MPMX19_06332 at 100.046 kb on + strand, within MPMX19_06332 at 100.107 kb on + strand, within MPMX19_06332 at 100.107 kb on + strand, within MPMX19_06332 at 100.107 kb on + strand, within MPMX19_06332 at 100.107 kb on + strand, within MPMX19_06332 at 100.107 kb on + strand, within MPMX19_06332 at 100.107 kb on + strand, within MPMX19_06332 at 100.108 kb on - strand, within MPMX19_06332 at 100.108 kb on - strand, within MPMX19_06332 at 100.398 kb on + strand at 100.399 kb on - strand at 100.399 kb on - strand at 100.399 kb on - strand at 100.399 kb on - strand at 100.399 kb on - strand at 100.620 kb on + strand at 100.620 kb on + strand at 100.620 kb on + strand at 100.620 kb on + strand at 100.620 kb on + strand at 100.621 kb on - strand at 100.621 kb on - strand at 100.621 kb on - strand at 100.621 kb on - strand at 100.621 kb on - strand at 100.621 kb on - strand at 100.839 kb on + strand, within MPMX19_06333 at 100.839 kb on + strand, within MPMX19_06333 at 100.839 kb on + strand, within MPMX19_06333 at 100.839 kb on + strand, within MPMX19_06333 at 101.400 kb on + strand, within MPMX19_06333 at 101.400 kb on + strand, within MPMX19_06333 at 101.400 kb on + strand, within MPMX19_06333 at 101.400 kb on + strand, within MPMX19_06333 at 101.401 kb on - strand, within MPMX19_06333 at 101.401 kb on - strand, within MPMX19_06333 at 101.401 kb on - strand, within MPMX19_06333 at 101.401 kb on - strand, within MPMX19_06333 at 101.401 kb on - strand, within MPMX19_06333 at 101.481 kb on + strand, within MPMX19_06333 at 101.481 kb on + strand, within MPMX19_06333 at 101.481 kb on + strand, within MPMX19_06333 at 101.482 kb on - strand, within MPMX19_06333 at 101.482 kb on - strand, within MPMX19_06333 at 101.482 kb on - strand, within MPMX19_06333 at 101.482 kb on - strand, within MPMX19_06333 at 101.493 kb on + strand, within MPMX19_06333 at 101.493 kb on + strand, within MPMX19_06333 at 101.739 kb on + strand at 101.739 kb on + strand at 101.739 kb on + strand at 101.739 kb on + strand at 101.739 kb on + strand at 101.739 kb on + strand at 101.739 kb on + strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.740 kb on - strand at 101.818 kb on + strand at 101.818 kb on + strand at 101.819 kb on - strand at 101.819 kb on - strand at 101.865 kb on + strand at 101.865 kb on + strand at 101.983 kb on + strand at 101.983 kb on + strand at 101.983 kb on + strand at 101.984 kb on - strand at 101.984 kb on - strand at 101.984 kb on - strand at 101.993 kb on + strand at 101.993 kb on + strand at 101.993 kb on + strand at 101.993 kb on + strand at 101.993 kb on + strand at 101.993 kb on + strand at 101.993 kb on + strand at 101.994 kb on - strand at 101.994 kb on - strand at 101.994 kb on - strand at 101.994 kb on - strand at 101.994 kb on - strand at 101.994 kb on - strand at 101.994 kb on - strand at 101.994 kb on - strand at 101.994 kb on - strand at 101.999 kb on + strand at 101.999 kb on + strand at 101.999 kb on + strand at 101.999 kb on + strand at 101.999 kb on + strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.000 kb on - strand at 102.059 kb on + strand at 102.060 kb on - strand at 102.221 kb on + strand, within MPMX19_06334 at 102.371 kb on + strand, within MPMX19_06334 at 102.371 kb on + strand, within MPMX19_06334 at 102.372 kb on - strand, within MPMX19_06334 at 102.372 kb on - strand, within MPMX19_06334 at 102.411 kb on - strand, within MPMX19_06334 at 102.578 kb on + strand, within MPMX19_06334 at 102.579 kb on - strand at 102.579 kb on - strand at 102.579 kb on - strand at 102.579 kb on - strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.652 kb on + strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.653 kb on - strand at 102.742 kb on + strand at 102.742 kb on + strand at 102.742 kb on + strand at 102.850 kb on + strand at 102.851 kb on - strand at 102.865 kb on + strand at 102.865 kb on + strand at 102.865 kb on + strand at 102.866 kb on - strand at 102.866 kb on - strand at 102.866 kb on - strand at 102.866 kb on - strand at 102.866 kb on - strand at 102.866 kb on - strand at 102.866 kb on - strand at 102.866 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 99,648 - MPMX19_06332 0.39 -0.7 99,743 + MPMX19_06332 0.46 -0.7 99,743 + MPMX19_06332 0.46 +0.9 99,744 - MPMX19_06332 0.46 -0.3 99,779 + MPMX19_06332 0.48 -0.5 99,780 - MPMX19_06332 0.48 -1.4 99,938 - MPMX19_06332 0.59 -0.7 100,046 + MPMX19_06332 0.66 -0.5 100,046 + MPMX19_06332 0.66 +1.4 100,046 + MPMX19_06332 0.66 +0.9 100,107 + MPMX19_06332 0.70 +1.0 100,107 + MPMX19_06332 0.70 -0.2 100,107 + MPMX19_06332 0.70 +0.9 100,107 + MPMX19_06332 0.70 -0.3 100,107 + MPMX19_06332 0.70 -0.8 100,107 + MPMX19_06332 0.70 +0.0 100,108 - MPMX19_06332 0.70 -1.6 100,108 - MPMX19_06332 0.70 -0.4 100,398 + -1.9 100,399 - +1.0 100,399 - -0.4 100,399 - -0.1 100,399 - +0.9 100,399 - -1.0 100,620 + -0.7 100,620 + +0.6 100,620 + +0.1 100,620 + -0.9 100,620 + +0.5 100,621 - +1.5 100,621 - -0.4 100,621 - -0.2 100,621 - -2.1 100,621 - +0.2 100,621 - +0.3 100,839 + MPMX19_06333 0.23 -0.1 100,839 + MPMX19_06333 0.23 -0.9 100,839 + MPMX19_06333 0.23 -0.2 100,839 + MPMX19_06333 0.23 -0.8 101,400 + MPMX19_06333 0.65 -0.3 101,400 + MPMX19_06333 0.65 +0.7 101,400 + MPMX19_06333 0.65 -1.4 101,400 + MPMX19_06333 0.65 -1.9 101,401 - MPMX19_06333 0.65 -0.1 101,401 - MPMX19_06333 0.65 +0.9 101,401 - MPMX19_06333 0.65 -0.6 101,401 - MPMX19_06333 0.65 -0.6 101,401 - MPMX19_06333 0.65 +0.3 101,481 + MPMX19_06333 0.71 -1.1 101,481 + MPMX19_06333 0.71 -0.4 101,481 + MPMX19_06333 0.71 +0.2 101,482 - MPMX19_06333 0.71 -0.9 101,482 - MPMX19_06333 0.71 +1.7 101,482 - MPMX19_06333 0.71 -1.4 101,482 - MPMX19_06333 0.71 -0.4 101,493 + MPMX19_06333 0.72 -0.9 101,493 + MPMX19_06333 0.72 +0.9 101,739 + -1.3 101,739 + -0.6 101,739 + +0.3 101,739 + -1.0 101,739 + +0.2 101,739 + -1.9 101,739 + +0.1 101,740 - -0.1 101,740 - -0.3 101,740 - -0.0 101,740 - -1.3 101,740 - +1.3 101,740 - -0.1 101,740 - +0.4 101,740 - -0.8 101,740 - +0.0 101,740 - +0.2 101,740 - -1.4 101,740 - +2.2 101,818 + -0.4 101,818 + +1.4 101,819 - +1.3 101,819 - -1.1 101,865 + -1.2 101,865 + -1.6 101,983 + -0.2 101,983 + -0.1 101,983 + +1.9 101,984 - -0.3 101,984 - +1.0 101,984 - -0.1 101,993 + +0.4 101,993 + -1.8 101,993 + -0.2 101,993 + +0.2 101,993 + -1.7 101,993 + +0.3 101,993 + -0.6 101,994 - -1.8 101,994 - +0.7 101,994 - +0.3 101,994 - +0.1 101,994 - -0.4 101,994 - -1.4 101,994 - -0.8 101,994 - -1.8 101,994 - -0.7 101,999 + -1.6 101,999 + +0.3 101,999 + +1.2 101,999 + +0.3 101,999 + -0.4 102,000 - -0.4 102,000 - +1.4 102,000 - -0.3 102,000 - +0.3 102,000 - +1.3 102,000 - -1.6 102,000 - -1.4 102,000 - -1.4 102,000 - -2.1 102,000 - -0.2 102,000 - +0.1 102,059 + -0.9 102,060 - +0.0 102,221 + MPMX19_06334 0.25 -0.2 102,371 + MPMX19_06334 0.52 +0.4 102,371 + MPMX19_06334 0.52 -1.0 102,372 - MPMX19_06334 0.53 -0.7 102,372 - MPMX19_06334 0.53 -1.5 102,411 - MPMX19_06334 0.60 -1.4 102,578 + MPMX19_06334 0.90 -1.4 102,579 - -0.5 102,579 - +1.0 102,579 - +0.3 102,579 - +0.2 102,652 + -2.8 102,652 + -0.1 102,652 + -1.4 102,652 + -0.6 102,652 + +0.4 102,652 + +0.3 102,652 + -0.3 102,652 + -0.2 102,652 + +0.6 102,653 - +0.0 102,653 - -1.1 102,653 - -1.4 102,653 - +0.3 102,653 - +0.9 102,653 - -0.7 102,653 - +0.6 102,653 - -1.3 102,653 - +1.3 102,653 - -2.2 102,653 - -0.8 102,742 + -0.3 102,742 + -0.1 102,742 + -0.2 102,850 + +0.1 102,851 - -0.8 102,865 + +0.5 102,865 + -0.5 102,865 + +0.9 102,866 - -0.7 102,866 - -0.4 102,866 - +1.5 102,866 - +0.4 102,866 - +0.4 102,866 - +0.0 102,866 - -0.3 102,866 - -2.5
Or see this region's nucleotide sequence