Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06330

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06328 and MPMX19_06329 are separated by 2 nucleotidesMPMX19_06329 and MPMX19_06330 overlap by 4 nucleotidesMPMX19_06330 and MPMX19_06331 are separated by 757 nucleotides MPMX19_06328: MPMX19_06328 - hypothetical protein, at 93,349 to 94,791 _06328 MPMX19_06329: MPMX19_06329 - hypothetical protein, at 94,794 to 95,720 _06329 MPMX19_06330: MPMX19_06330 - hypothetical protein, at 95,717 to 97,420 _06330 MPMX19_06331: MPMX19_06331 - hypothetical protein, at 98,178 to 99,077 _06331 Position (kb) 95 96 97 98Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 94.795 kb on + strandat 94.795 kb on + strandat 94.795 kb on + strandat 94.795 kb on + strandat 94.795 kb on + strandat 94.795 kb on + strandat 94.796 kb on - strandat 94.796 kb on - strandat 94.796 kb on - strandat 95.216 kb on + strand, within MPMX19_06329at 95.216 kb on + strand, within MPMX19_06329at 95.216 kb on + strand, within MPMX19_06329at 95.217 kb on - strand, within MPMX19_06329at 95.217 kb on - strand, within MPMX19_06329at 95.242 kb on + strand, within MPMX19_06329at 95.242 kb on + strand, within MPMX19_06329at 95.242 kb on + strand, within MPMX19_06329at 95.242 kb on + strand, within MPMX19_06329at 95.242 kb on + strand, within MPMX19_06329at 95.242 kb on + strand, within MPMX19_06329at 95.243 kb on - strand, within MPMX19_06329at 95.243 kb on - strand, within MPMX19_06329at 95.243 kb on - strand, within MPMX19_06329at 95.390 kb on - strand, within MPMX19_06329at 95.569 kb on + strand, within MPMX19_06329at 95.570 kb on - strand, within MPMX19_06329at 95.591 kb on + strand, within MPMX19_06329at 95.591 kb on + strand, within MPMX19_06329at 95.591 kb on + strand, within MPMX19_06329at 95.592 kb on - strand, within MPMX19_06329at 95.668 kb on - strandat 95.677 kb on + strandat 95.677 kb on + strandat 95.677 kb on + strandat 95.678 kb on - strandat 95.687 kb on - strandat 95.847 kb on + strandat 95.847 kb on + strandat 95.984 kb on + strand, within MPMX19_06330at 96.102 kb on + strand, within MPMX19_06330at 96.102 kb on + strand, within MPMX19_06330at 96.103 kb on - strand, within MPMX19_06330at 96.140 kb on + strand, within MPMX19_06330at 96.141 kb on - strand, within MPMX19_06330at 96.141 kb on - strand, within MPMX19_06330at 96.162 kb on + strand, within MPMX19_06330at 96.162 kb on + strand, within MPMX19_06330at 96.163 kb on - strand, within MPMX19_06330at 96.342 kb on + strand, within MPMX19_06330at 96.342 kb on + strand, within MPMX19_06330at 96.342 kb on + strand, within MPMX19_06330at 96.343 kb on - strand, within MPMX19_06330at 96.343 kb on - strand, within MPMX19_06330at 96.343 kb on - strand, within MPMX19_06330at 96.395 kb on - strand, within MPMX19_06330at 96.417 kb on + strand, within MPMX19_06330at 96.417 kb on + strand, within MPMX19_06330at 96.537 kb on + strand, within MPMX19_06330at 96.555 kb on + strand, within MPMX19_06330at 96.555 kb on + strand, within MPMX19_06330at 96.555 kb on + strand, within MPMX19_06330at 96.555 kb on + strand, within MPMX19_06330at 96.556 kb on - strand, within MPMX19_06330at 96.556 kb on - strand, within MPMX19_06330at 96.556 kb on - strand, within MPMX19_06330at 96.599 kb on - strand, within MPMX19_06330at 96.686 kb on + strand, within MPMX19_06330at 96.747 kb on + strand, within MPMX19_06330at 96.747 kb on + strand, within MPMX19_06330at 96.747 kb on + strand, within MPMX19_06330at 96.748 kb on - strand, within MPMX19_06330at 96.819 kb on + strand, within MPMX19_06330at 96.819 kb on + strand, within MPMX19_06330at 96.819 kb on + strand, within MPMX19_06330at 96.819 kb on + strand, within MPMX19_06330at 96.820 kb on - strand, within MPMX19_06330at 96.820 kb on - strand, within MPMX19_06330at 96.820 kb on - strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.894 kb on + strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 96.895 kb on - strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.089 kb on + strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.090 kb on - strand, within MPMX19_06330at 97.092 kb on + strand, within MPMX19_06330at 97.093 kb on - strand, within MPMX19_06330at 97.206 kb on + strand, within MPMX19_06330at 97.224 kb on + strand, within MPMX19_06330at 97.224 kb on + strand, within MPMX19_06330at 97.224 kb on + strand, within MPMX19_06330at 97.224 kb on + strand, within MPMX19_06330at 97.224 kb on + strand, within MPMX19_06330at 97.225 kb on - strand, within MPMX19_06330at 97.225 kb on - strand, within MPMX19_06330at 97.225 kb on - strand, within MPMX19_06330at 97.241 kb on - strand, within MPMX19_06330at 97.241 kb on - strand, within MPMX19_06330at 97.250 kb on + strandat 97.250 kb on + strandat 97.250 kb on + strandat 97.250 kb on + strandat 97.250 kb on + strandat 97.413 kb on - strandat 97.413 kb on - strandat 97.460 kb on + strandat 97.549 kb on + strandat 97.549 kb on + strandat 97.549 kb on + strandat 97.549 kb on + strandat 97.549 kb on + strandat 97.549 kb on + strandat 97.550 kb on - strandat 97.550 kb on - strandat 97.550 kb on - strandat 97.550 kb on - strandat 97.588 kb on - strandat 97.594 kb on + strandat 97.626 kb on + strandat 97.626 kb on + strandat 97.626 kb on + strandat 97.626 kb on + strandat 97.626 kb on + strandat 97.627 kb on - strandat 97.627 kb on - strandat 97.627 kb on - strandat 97.627 kb on - strandat 97.629 kb on + strandat 97.672 kb on + strandat 97.672 kb on + strandat 97.672 kb on + strandat 97.672 kb on + strandat 97.672 kb on + strandat 97.672 kb on + strandat 97.673 kb on - strandat 97.673 kb on - strandat 97.694 kb on + strandat 98.103 kb on - strandat 98.373 kb on + strand, within MPMX19_06331at 98.373 kb on + strand, within MPMX19_06331at 98.374 kb on - strand, within MPMX19_06331at 98.374 kb on - strand, within MPMX19_06331

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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94,795 + -0.1
94,795 + +0.2
94,795 + -0.3
94,795 + -0.0
94,795 + -2.1
94,795 + +0.7
94,796 - -1.7
94,796 - +0.6
94,796 - +0.5
95,216 + MPMX19_06329 0.46 -1.3
95,216 + MPMX19_06329 0.46 +1.2
95,216 + MPMX19_06329 0.46 +1.3
95,217 - MPMX19_06329 0.46 -0.3
95,217 - MPMX19_06329 0.46 -0.7
95,242 + MPMX19_06329 0.48 +1.1
95,242 + MPMX19_06329 0.48 -2.2
95,242 + MPMX19_06329 0.48 -1.4
95,242 + MPMX19_06329 0.48 +0.0
95,242 + MPMX19_06329 0.48 -2.1
95,242 + MPMX19_06329 0.48 +1.7
95,243 - MPMX19_06329 0.48 -1.0
95,243 - MPMX19_06329 0.48 +0.8
95,243 - MPMX19_06329 0.48 -1.4
95,390 - MPMX19_06329 0.64 -2.7
95,569 + MPMX19_06329 0.84 +1.9
95,570 - MPMX19_06329 0.84 -1.4
95,591 + MPMX19_06329 0.86 -1.7
95,591 + MPMX19_06329 0.86 -0.0
95,591 + MPMX19_06329 0.86 -0.6
95,592 - MPMX19_06329 0.86 -0.1
95,668 - +0.2
95,677 + +1.1
95,677 + +0.2
95,677 + -2.3
95,678 - -1.2
95,687 - +0.5
95,847 + -0.4
95,847 + +0.2
95,984 + MPMX19_06330 0.16 -0.7
96,102 + MPMX19_06330 0.23 -0.4
96,102 + MPMX19_06330 0.23 -0.2
96,103 - MPMX19_06330 0.23 -0.4
96,140 + MPMX19_06330 0.25 -1.4
96,141 - MPMX19_06330 0.25 -0.6
96,141 - MPMX19_06330 0.25 -1.3
96,162 + MPMX19_06330 0.26 -0.1
96,162 + MPMX19_06330 0.26 -1.1
96,163 - MPMX19_06330 0.26 -1.8
96,342 + MPMX19_06330 0.37 +0.2
96,342 + MPMX19_06330 0.37 +0.1
96,342 + MPMX19_06330 0.37 +0.6
96,343 - MPMX19_06330 0.37 -0.1
96,343 - MPMX19_06330 0.37 -0.7
96,343 - MPMX19_06330 0.37 +0.4
96,395 - MPMX19_06330 0.40 +0.5
96,417 + MPMX19_06330 0.41 -0.6
96,417 + MPMX19_06330 0.41 -2.0
96,537 + MPMX19_06330 0.48 -0.9
96,555 + MPMX19_06330 0.49 -1.8
96,555 + MPMX19_06330 0.49 +0.9
96,555 + MPMX19_06330 0.49 +2.6
96,555 + MPMX19_06330 0.49 +0.4
96,556 - MPMX19_06330 0.49 +0.2
96,556 - MPMX19_06330 0.49 +0.7
96,556 - MPMX19_06330 0.49 -0.4
96,599 - MPMX19_06330 0.52 -0.4
96,686 + MPMX19_06330 0.57 -1.4
96,747 + MPMX19_06330 0.60 -0.8
96,747 + MPMX19_06330 0.60 +0.5
96,747 + MPMX19_06330 0.60 +2.3
96,748 - MPMX19_06330 0.61 +0.3
96,819 + MPMX19_06330 0.65 +0.1
96,819 + MPMX19_06330 0.65 -1.2
96,819 + MPMX19_06330 0.65 +0.7
96,819 + MPMX19_06330 0.65 -2.1
96,820 - MPMX19_06330 0.65 -0.5
96,820 - MPMX19_06330 0.65 +0.3
96,820 - MPMX19_06330 0.65 +0.3
96,894 + MPMX19_06330 0.69 -0.3
96,894 + MPMX19_06330 0.69 +0.3
96,894 + MPMX19_06330 0.69 +0.3
96,894 + MPMX19_06330 0.69 -0.4
96,894 + MPMX19_06330 0.69 -1.6
96,894 + MPMX19_06330 0.69 -0.6
96,894 + MPMX19_06330 0.69 +0.0
96,894 + MPMX19_06330 0.69 -1.2
96,894 + MPMX19_06330 0.69 +0.2
96,894 + MPMX19_06330 0.69 -1.7
96,894 + MPMX19_06330 0.69 +1.3
96,894 + MPMX19_06330 0.69 -1.1
96,894 + MPMX19_06330 0.69 -0.0
96,894 + MPMX19_06330 0.69 -0.5
96,894 + MPMX19_06330 0.69 -0.2
96,895 - MPMX19_06330 0.69 +0.6
96,895 - MPMX19_06330 0.69 +0.8
96,895 - MPMX19_06330 0.69 +0.0
96,895 - MPMX19_06330 0.69 -0.9
96,895 - MPMX19_06330 0.69 +0.4
96,895 - MPMX19_06330 0.69 +1.9
96,895 - MPMX19_06330 0.69 -0.8
96,895 - MPMX19_06330 0.69 -0.2
96,895 - MPMX19_06330 0.69 +0.5
96,895 - MPMX19_06330 0.69 -2.1
96,895 - MPMX19_06330 0.69 -1.4
96,895 - MPMX19_06330 0.69 -1.3
96,895 - MPMX19_06330 0.69 -0.4
96,895 - MPMX19_06330 0.69 +0.7
96,895 - MPMX19_06330 0.69 -0.7
96,895 - MPMX19_06330 0.69 +0.1
96,895 - MPMX19_06330 0.69 +0.3
96,895 - MPMX19_06330 0.69 -0.3
96,895 - MPMX19_06330 0.69 +0.6
96,895 - MPMX19_06330 0.69 -0.0
97,089 + MPMX19_06330 0.81 +0.9
97,089 + MPMX19_06330 0.81 -1.5
97,089 + MPMX19_06330 0.81 -0.5
97,089 + MPMX19_06330 0.81 -0.9
97,089 + MPMX19_06330 0.81 +0.4
97,089 + MPMX19_06330 0.81 -1.4
97,089 + MPMX19_06330 0.81 +0.6
97,089 + MPMX19_06330 0.81 +0.3
97,089 + MPMX19_06330 0.81 -0.6
97,089 + MPMX19_06330 0.81 +0.1
97,089 + MPMX19_06330 0.81 -0.6
97,089 + MPMX19_06330 0.81 -0.2
97,089 + MPMX19_06330 0.81 -1.1
97,089 + MPMX19_06330 0.81 -0.0
97,090 - MPMX19_06330 0.81 -0.5
97,090 - MPMX19_06330 0.81 +0.3
97,090 - MPMX19_06330 0.81 -0.5
97,090 - MPMX19_06330 0.81 +0.3
97,090 - MPMX19_06330 0.81 -1.1
97,090 - MPMX19_06330 0.81 +0.4
97,090 - MPMX19_06330 0.81 -0.4
97,090 - MPMX19_06330 0.81 +0.3
97,090 - MPMX19_06330 0.81 +0.9
97,090 - MPMX19_06330 0.81 -0.2
97,090 - MPMX19_06330 0.81 -0.9
97,090 - MPMX19_06330 0.81 +0.9
97,090 - MPMX19_06330 0.81 -0.9
97,090 - MPMX19_06330 0.81 -1.7
97,090 - MPMX19_06330 0.81 -1.2
97,090 - MPMX19_06330 0.81 -2.4
97,090 - MPMX19_06330 0.81 -1.3
97,090 - MPMX19_06330 0.81 -0.0
97,090 - MPMX19_06330 0.81 -1.0
97,092 + MPMX19_06330 0.81 +0.1
97,093 - MPMX19_06330 0.81 -0.3
97,206 + MPMX19_06330 0.87 -0.7
97,224 + MPMX19_06330 0.88 -0.6
97,224 + MPMX19_06330 0.88 +0.6
97,224 + MPMX19_06330 0.88 +0.9
97,224 + MPMX19_06330 0.88 -1.3
97,224 + MPMX19_06330 0.88 -0.6
97,225 - MPMX19_06330 0.88 -0.5
97,225 - MPMX19_06330 0.88 -0.9
97,225 - MPMX19_06330 0.88 -1.1
97,241 - MPMX19_06330 0.89 -0.6
97,241 - MPMX19_06330 0.89 -0.6
97,250 + -1.3
97,250 + -1.2
97,250 + -0.5
97,250 + -0.7
97,250 + -1.4
97,413 - +0.5
97,413 - -1.7
97,460 + -0.3
97,549 + +0.2
97,549 + -0.3
97,549 + -2.9
97,549 + +0.7
97,549 + +0.3
97,549 + -0.4
97,550 - -1.7
97,550 - -0.1
97,550 - -0.4
97,550 - -0.7
97,588 - -2.3
97,594 + -1.2
97,626 + +0.4
97,626 + -1.3
97,626 + -0.6
97,626 + -0.9
97,626 + -1.1
97,627 - -1.2
97,627 - -0.0
97,627 - +0.1
97,627 - -2.1
97,629 + +0.5
97,672 + -0.9
97,672 + -0.8
97,672 + -1.1
97,672 + -1.1
97,672 + +0.6
97,672 + +1.4
97,673 - -1.0
97,673 - -1.9
97,694 + -0.4
98,103 - +1.1
98,373 + MPMX19_06331 0.22 -0.1
98,373 + MPMX19_06331 0.22 +0.0
98,374 - MPMX19_06331 0.22 +0.1
98,374 - MPMX19_06331 0.22 -0.1

Or see this region's nucleotide sequence