Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06302 and MPMX19_06303 are separated by 789 nucleotides MPMX19_06303 and MPMX19_06304 are separated by 55 nucleotides MPMX19_06304 and MPMX19_06305 are separated by 38 nucleotides
MPMX19_06302: MPMX19_06302 - tRNA-Arg, at 67,665 to 67,759
_06302
MPMX19_06303: MPMX19_06303 - hypothetical protein, at 68,549 to 69,277
_06303
MPMX19_06304: MPMX19_06304 - hypothetical protein, at 69,333 to 69,731
_06304
MPMX19_06305: MPMX19_06305 - hypothetical protein, at 69,770 to 70,318
_06305
Position (kb) 68
69
70 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 67.766 kb on + strand at 67.766 kb on + strand at 67.766 kb on + strand at 67.767 kb on - strand at 67.865 kb on + strand at 68.482 kb on + strand at 68.482 kb on + strand at 68.482 kb on + strand at 68.482 kb on + strand at 68.482 kb on + strand at 68.482 kb on + strand at 68.482 kb on + strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.483 kb on - strand at 68.968 kb on + strand, within MPMX19_06303 at 68.968 kb on + strand, within MPMX19_06303 at 68.968 kb on + strand, within MPMX19_06303 at 68.969 kb on - strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.096 kb on + strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.097 kb on - strand, within MPMX19_06303 at 69.111 kb on + strand, within MPMX19_06303 at 69.253 kb on - strand at 69.253 kb on - strand at 69.253 kb on - strand at 69.253 kb on - strand at 69.744 kb on + strand at 69.744 kb on + strand at 70.002 kb on + strand, within MPMX19_06305 at 70.002 kb on + strand, within MPMX19_06305 at 70.003 kb on - strand, within MPMX19_06305
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 67,766 + +0.3 67,766 + -0.4 67,766 + -0.9 67,767 - -0.4 67,865 + -3.9 68,482 + +0.1 68,482 + +0.1 68,482 + +0.7 68,482 + +1.2 68,482 + -0.7 68,482 + -2.2 68,482 + -1.6 68,483 - +0.2 68,483 - -2.1 68,483 - -0.4 68,483 - +0.3 68,483 - +1.3 68,483 - -1.7 68,483 - +0.9 68,483 - -0.4 68,483 - +1.6 68,483 - -1.0 68,483 - -0.3 68,968 + MPMX19_06303 0.57 -1.5 68,968 + MPMX19_06303 0.57 -0.1 68,968 + MPMX19_06303 0.57 +0.3 68,969 - MPMX19_06303 0.58 -0.3 69,096 + MPMX19_06303 0.75 -1.9 69,096 + MPMX19_06303 0.75 -0.9 69,096 + MPMX19_06303 0.75 +0.2 69,096 + MPMX19_06303 0.75 -0.9 69,096 + MPMX19_06303 0.75 -0.0 69,096 + MPMX19_06303 0.75 -0.7 69,096 + MPMX19_06303 0.75 -1.4 69,096 + MPMX19_06303 0.75 -1.6 69,096 + MPMX19_06303 0.75 -1.6 69,096 + MPMX19_06303 0.75 -1.3 69,096 + MPMX19_06303 0.75 -0.7 69,097 - MPMX19_06303 0.75 -0.4 69,097 - MPMX19_06303 0.75 -1.3 69,097 - MPMX19_06303 0.75 +0.4 69,097 - MPMX19_06303 0.75 -0.6 69,097 - MPMX19_06303 0.75 -1.3 69,097 - MPMX19_06303 0.75 -0.6 69,097 - MPMX19_06303 0.75 +0.5 69,097 - MPMX19_06303 0.75 -0.1 69,097 - MPMX19_06303 0.75 -0.2 69,097 - MPMX19_06303 0.75 -1.6 69,097 - MPMX19_06303 0.75 -1.2 69,097 - MPMX19_06303 0.75 -0.6 69,097 - MPMX19_06303 0.75 -0.6 69,111 + MPMX19_06303 0.77 -0.8 69,253 - -0.3 69,253 - -1.0 69,253 - +0.7 69,253 - -0.4 69,744 + -1.1 69,744 + -0.5 70,002 + MPMX19_06305 0.42 -1.1 70,002 + MPMX19_06305 0.42 +0.2 70,003 - MPMX19_06305 0.42 -0.7
Or see this region's nucleotide sequence