Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06148 and MPMX19_06149 are separated by 149 nucleotides MPMX19_06149 and MPMX19_06150 are separated by 9 nucleotides MPMX19_06150 and MPMX19_06151 are separated by 199 nucleotides MPMX19_06151 and MPMX19_06152 are separated by 16 nucleotides
MPMX19_06148: MPMX19_06148 - Beta-glucosidase A, at 333,721 to 335,208
_06148
MPMX19_06149: MPMX19_06149 - hypothetical protein, at 335,358 to 335,552
_06149
MPMX19_06150: MPMX19_06150 - Corrinoid adenosyltransferase, at 335,562 to 336,131
_06150
MPMX19_06151: MPMX19_06151 - Electron transfer flavoprotein subunit beta, at 336,331 to 337,080
_06151
MPMX19_06152: MPMX19_06152 - Electron transfer flavoprotein subunit alpha, at 337,097 to 338,035
_06152
Position (kb) 335
336
337 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 334.625 kb on + strand, within MPMX19_06148 at 334.626 kb on - strand, within MPMX19_06148 at 334.626 kb on - strand, within MPMX19_06148 at 334.626 kb on - strand, within MPMX19_06148 at 334.626 kb on - strand, within MPMX19_06148 at 334.760 kb on + strand, within MPMX19_06148 at 334.760 kb on + strand, within MPMX19_06148 at 334.760 kb on + strand, within MPMX19_06148 at 334.760 kb on + strand, within MPMX19_06148 at 334.760 kb on + strand, within MPMX19_06148 at 334.760 kb on + strand, within MPMX19_06148 at 334.761 kb on - strand, within MPMX19_06148 at 334.761 kb on - strand, within MPMX19_06148 at 334.761 kb on - strand, within MPMX19_06148 at 334.761 kb on - strand, within MPMX19_06148 at 334.761 kb on - strand, within MPMX19_06148 at 334.835 kb on + strand, within MPMX19_06148 at 334.835 kb on + strand, within MPMX19_06148 at 334.835 kb on + strand, within MPMX19_06148 at 334.835 kb on + strand, within MPMX19_06148 at 334.835 kb on + strand, within MPMX19_06148 at 334.836 kb on - strand, within MPMX19_06148 at 334.836 kb on - strand, within MPMX19_06148 at 334.836 kb on - strand, within MPMX19_06148 at 334.881 kb on - strand, within MPMX19_06148 at 334.881 kb on - strand, within MPMX19_06148 at 334.881 kb on - strand, within MPMX19_06148 at 334.889 kb on + strand, within MPMX19_06148 at 334.889 kb on + strand, within MPMX19_06148 at 334.889 kb on + strand, within MPMX19_06148 at 334.889 kb on + strand, within MPMX19_06148 at 334.890 kb on - strand, within MPMX19_06148 at 334.890 kb on - strand, within MPMX19_06148 at 334.890 kb on - strand, within MPMX19_06148 at 334.890 kb on - strand, within MPMX19_06148 at 334.890 kb on - strand, within MPMX19_06148 at 334.890 kb on - strand, within MPMX19_06148 at 334.890 kb on - strand, within MPMX19_06148 at 334.890 kb on - strand, within MPMX19_06148 at 334.890 kb on - strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.949 kb on + strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 334.950 kb on - strand, within MPMX19_06148 at 335.006 kb on + strand, within MPMX19_06148 at 335.007 kb on - strand, within MPMX19_06148 at 335.007 kb on - strand, within MPMX19_06148 at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.263 kb on + strand at 335.264 kb on - strand at 335.264 kb on - strand at 335.264 kb on - strand at 335.264 kb on - strand at 335.264 kb on - strand at 335.264 kb on - strand at 335.264 kb on - strand at 335.264 kb on - strand at 335.296 kb on + strand at 335.345 kb on + strand at 335.345 kb on + strand at 335.345 kb on + strand at 335.345 kb on + strand at 335.345 kb on + strand at 335.346 kb on - strand at 335.346 kb on - strand at 335.346 kb on - strand at 335.346 kb on - strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.347 kb on + strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.348 kb on - strand at 335.566 kb on + strand at 335.566 kb on + strand at 335.566 kb on + strand at 335.567 kb on - strand at 335.567 kb on - strand at 335.567 kb on - strand at 335.583 kb on + strand at 335.583 kb on + strand at 335.583 kb on + strand at 335.584 kb on - strand at 335.584 kb on - strand at 335.584 kb on - strand at 335.584 kb on - strand at 335.584 kb on - strand at 335.664 kb on + strand, within MPMX19_06150 at 335.665 kb on - strand, within MPMX19_06150 at 335.665 kb on - strand, within MPMX19_06150 at 335.665 kb on - strand, within MPMX19_06150 at 335.714 kb on + strand, within MPMX19_06150 at 335.714 kb on + strand, within MPMX19_06150 at 335.715 kb on - strand, within MPMX19_06150 at 335.715 kb on - strand, within MPMX19_06150 at 335.715 kb on - strand, within MPMX19_06150 at 335.817 kb on + strand, within MPMX19_06150 at 335.818 kb on - strand, within MPMX19_06150 at 335.818 kb on - strand, within MPMX19_06150 at 335.818 kb on - strand, within MPMX19_06150 at 336.033 kb on + strand, within MPMX19_06150 at 336.033 kb on + strand, within MPMX19_06150 at 336.033 kb on + strand, within MPMX19_06150 at 336.033 kb on + strand, within MPMX19_06150 at 336.033 kb on + strand, within MPMX19_06150 at 336.033 kb on + strand, within MPMX19_06150 at 336.034 kb on - strand, within MPMX19_06150 at 336.034 kb on - strand, within MPMX19_06150 at 336.034 kb on - strand, within MPMX19_06150 at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.103 kb on + strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.104 kb on - strand at 336.133 kb on + strand at 336.133 kb on + strand at 336.133 kb on + strand at 336.133 kb on + strand at 336.134 kb on - strand at 336.134 kb on - strand at 336.242 kb on + strand at 336.242 kb on + strand at 336.242 kb on + strand at 336.242 kb on + strand at 336.242 kb on + strand at 336.242 kb on + strand at 336.242 kb on + strand at 336.242 kb on + strand at 336.243 kb on - strand at 336.243 kb on - strand at 336.243 kb on - strand at 336.255 kb on + strand at 336.255 kb on + strand at 336.255 kb on + strand at 336.255 kb on + strand at 336.255 kb on + strand at 336.255 kb on + strand at 336.255 kb on + strand at 336.255 kb on + strand at 336.255 kb on + strand at 336.256 kb on - strand at 336.256 kb on - strand at 336.256 kb on - strand at 336.298 kb on + strand at 336.331 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 334,625 + MPMX19_06148 0.61 +0.8 334,626 - MPMX19_06148 0.61 +0.8 334,626 - MPMX19_06148 0.61 +1.1 334,626 - MPMX19_06148 0.61 +0.9 334,626 - MPMX19_06148 0.61 +0.1 334,760 + MPMX19_06148 0.70 -0.5 334,760 + MPMX19_06148 0.70 -1.6 334,760 + MPMX19_06148 0.70 -0.2 334,760 + MPMX19_06148 0.70 -0.8 334,760 + MPMX19_06148 0.70 +0.3 334,760 + MPMX19_06148 0.70 +0.5 334,761 - MPMX19_06148 0.70 -1.7 334,761 - MPMX19_06148 0.70 +0.2 334,761 - MPMX19_06148 0.70 -1.0 334,761 - MPMX19_06148 0.70 -1.4 334,761 - MPMX19_06148 0.70 -0.3 334,835 + MPMX19_06148 0.75 -2.1 334,835 + MPMX19_06148 0.75 +0.5 334,835 + MPMX19_06148 0.75 +1.1 334,835 + MPMX19_06148 0.75 -0.7 334,835 + MPMX19_06148 0.75 -0.3 334,836 - MPMX19_06148 0.75 -0.0 334,836 - MPMX19_06148 0.75 -0.0 334,836 - MPMX19_06148 0.75 +0.3 334,881 - MPMX19_06148 0.78 -0.9 334,881 - MPMX19_06148 0.78 +1.0 334,881 - MPMX19_06148 0.78 +0.2 334,889 + MPMX19_06148 0.78 -0.5 334,889 + MPMX19_06148 0.78 -0.4 334,889 + MPMX19_06148 0.78 -0.1 334,889 + MPMX19_06148 0.78 -1.9 334,890 - MPMX19_06148 0.79 -1.8 334,890 - MPMX19_06148 0.79 +0.4 334,890 - MPMX19_06148 0.79 -0.9 334,890 - MPMX19_06148 0.79 +0.3 334,890 - MPMX19_06148 0.79 +0.4 334,890 - MPMX19_06148 0.79 -1.2 334,890 - MPMX19_06148 0.79 +0.4 334,890 - MPMX19_06148 0.79 -1.8 334,890 - MPMX19_06148 0.79 -0.9 334,949 + MPMX19_06148 0.83 -0.2 334,949 + MPMX19_06148 0.83 -0.8 334,949 + MPMX19_06148 0.83 -0.6 334,949 + MPMX19_06148 0.83 +0.8 334,949 + MPMX19_06148 0.83 +1.1 334,949 + MPMX19_06148 0.83 -1.4 334,949 + MPMX19_06148 0.83 -1.8 334,949 + MPMX19_06148 0.83 -0.8 334,949 + MPMX19_06148 0.83 +0.7 334,949 + MPMX19_06148 0.83 -0.8 334,949 + MPMX19_06148 0.83 -0.9 334,949 + MPMX19_06148 0.83 +0.9 334,949 + MPMX19_06148 0.83 +2.4 334,949 + MPMX19_06148 0.83 -0.0 334,949 + MPMX19_06148 0.83 -0.8 334,949 + MPMX19_06148 0.83 -1.9 334,949 + MPMX19_06148 0.83 +0.2 334,949 + MPMX19_06148 0.83 -0.5 334,949 + MPMX19_06148 0.83 -1.7 334,949 + MPMX19_06148 0.83 +0.8 334,949 + MPMX19_06148 0.83 -0.5 334,949 + MPMX19_06148 0.83 -0.1 334,950 - MPMX19_06148 0.83 -0.3 334,950 - MPMX19_06148 0.83 +0.1 334,950 - MPMX19_06148 0.83 -0.9 334,950 - MPMX19_06148 0.83 +0.2 334,950 - MPMX19_06148 0.83 -0.0 334,950 - MPMX19_06148 0.83 -0.0 334,950 - MPMX19_06148 0.83 -0.2 334,950 - MPMX19_06148 0.83 -1.5 334,950 - MPMX19_06148 0.83 +0.2 334,950 - MPMX19_06148 0.83 -0.2 334,950 - MPMX19_06148 0.83 -0.1 334,950 - MPMX19_06148 0.83 +1.3 334,950 - MPMX19_06148 0.83 -0.6 334,950 - MPMX19_06148 0.83 -0.2 334,950 - MPMX19_06148 0.83 +0.3 334,950 - MPMX19_06148 0.83 -0.8 334,950 - MPMX19_06148 0.83 -0.1 334,950 - MPMX19_06148 0.83 -0.6 334,950 - MPMX19_06148 0.83 -0.9 334,950 - MPMX19_06148 0.83 +0.2 334,950 - MPMX19_06148 0.83 -2.0 334,950 - MPMX19_06148 0.83 +1.4 334,950 - MPMX19_06148 0.83 +0.4 334,950 - MPMX19_06148 0.83 +0.7 334,950 - MPMX19_06148 0.83 -0.2 334,950 - MPMX19_06148 0.83 +0.2 334,950 - MPMX19_06148 0.83 +0.2 334,950 - MPMX19_06148 0.83 +0.6 334,950 - MPMX19_06148 0.83 +0.8 334,950 - MPMX19_06148 0.83 -0.5 334,950 - MPMX19_06148 0.83 -1.1 334,950 - MPMX19_06148 0.83 +0.5 334,950 - MPMX19_06148 0.83 +0.6 335,006 + MPMX19_06148 0.86 -0.2 335,007 - MPMX19_06148 0.86 +0.9 335,007 - MPMX19_06148 0.86 +0.1 335,263 + -0.2 335,263 + -1.4 335,263 + -0.3 335,263 + +0.4 335,263 + +0.0 335,263 + +0.6 335,263 + -1.4 335,263 + -1.2 335,263 + -2.7 335,263 + -0.1 335,263 + -0.7 335,263 + +1.0 335,263 + -1.2 335,264 - +0.8 335,264 - +0.6 335,264 - +0.0 335,264 - -0.0 335,264 - -1.3 335,264 - -1.8 335,264 - -1.8 335,264 - -1.0 335,296 + -1.8 335,345 + -0.9 335,345 + -0.7 335,345 + +0.1 335,345 + -0.9 335,345 + -1.0 335,346 - +0.8 335,346 - -0.1 335,346 - +0.6 335,346 - -0.4 335,347 + -2.5 335,347 + -0.6 335,347 + +0.5 335,347 + -0.5 335,347 + -0.3 335,347 + -0.9 335,347 + -0.2 335,347 + +0.8 335,347 + +0.3 335,347 + -0.9 335,347 + +0.0 335,347 + +0.5 335,347 + +0.5 335,347 + -0.9 335,347 + -0.8 335,347 + +0.1 335,347 + -1.1 335,347 + +0.8 335,347 + -0.9 335,347 + +0.6 335,347 + -1.7 335,347 + -1.9 335,347 + -3.0 335,348 - -0.7 335,348 - +0.1 335,348 - -0.8 335,348 - -1.4 335,348 - -1.4 335,348 - +0.7 335,348 - +0.7 335,348 - -1.0 335,348 - -1.0 335,348 - -0.0 335,348 - +0.2 335,348 - -0.4 335,348 - +0.8 335,348 - -0.3 335,348 - +0.7 335,348 - +0.2 335,348 - -0.5 335,348 - -0.2 335,348 - -1.6 335,348 - -0.8 335,348 - -1.7 335,348 - -1.4 335,348 - -2.4 335,348 - +1.0 335,348 - -0.5 335,348 - -1.5 335,566 + +1.2 335,566 + -0.8 335,566 + -0.4 335,567 - +0.1 335,567 - -2.2 335,567 - -0.8 335,583 + -0.9 335,583 + +0.4 335,583 + +0.6 335,584 - +0.5 335,584 - -1.5 335,584 - -1.1 335,584 - -0.3 335,584 - -2.9 335,664 + MPMX19_06150 0.18 -2.3 335,665 - MPMX19_06150 0.18 +0.4 335,665 - MPMX19_06150 0.18 +0.1 335,665 - MPMX19_06150 0.18 -1.8 335,714 + MPMX19_06150 0.27 +0.8 335,714 + MPMX19_06150 0.27 -1.0 335,715 - MPMX19_06150 0.27 -1.2 335,715 - MPMX19_06150 0.27 +0.5 335,715 - MPMX19_06150 0.27 -1.5 335,817 + MPMX19_06150 0.45 -3.4 335,818 - MPMX19_06150 0.45 +0.8 335,818 - MPMX19_06150 0.45 -1.7 335,818 - MPMX19_06150 0.45 -1.3 336,033 + MPMX19_06150 0.83 +0.1 336,033 + MPMX19_06150 0.83 +0.1 336,033 + MPMX19_06150 0.83 -1.3 336,033 + MPMX19_06150 0.83 +0.2 336,033 + MPMX19_06150 0.83 -0.8 336,033 + MPMX19_06150 0.83 -0.5 336,034 - MPMX19_06150 0.83 -1.2 336,034 - MPMX19_06150 0.83 -2.0 336,034 - MPMX19_06150 0.83 -0.0 336,103 + -0.5 336,103 + -1.8 336,103 + -2.3 336,103 + -1.8 336,103 + -1.1 336,103 + -0.2 336,103 + -1.0 336,103 + +0.3 336,103 + -0.5 336,103 + -0.8 336,103 + +0.4 336,103 + -1.7 336,103 + -0.2 336,103 + -0.2 336,103 + -0.6 336,103 + +1.2 336,103 + -1.5 336,104 - -1.7 336,104 - -2.0 336,104 - +0.1 336,104 - -0.0 336,104 - -1.0 336,104 - -1.8 336,104 - -1.0 336,104 - -2.1 336,104 - +0.2 336,104 - +0.4 336,104 - -1.8 336,104 - -0.4 336,104 - -1.2 336,104 - +1.0 336,104 - -0.0 336,104 - -0.5 336,133 + -1.2 336,133 + -1.4 336,133 + +0.6 336,133 + -1.4 336,134 - -0.1 336,134 - -2.1 336,242 + -0.7 336,242 + +0.1 336,242 + +0.8 336,242 + +0.2 336,242 + -0.5 336,242 + +0.2 336,242 + +0.2 336,242 + -1.5 336,243 - -1.5 336,243 - -1.5 336,243 - -0.5 336,255 + -1.8 336,255 + -1.2 336,255 + -1.9 336,255 + -0.5 336,255 + +0.6 336,255 + +1.1 336,255 + -0.1 336,255 + -0.2 336,255 + -2.5 336,256 - -0.1 336,256 - +0.1 336,256 - -1.0 336,298 + -1.6 336,331 - -0.1
Or see this region's nucleotide sequence