Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06128 and MPMX19_06129 overlap by 1 nucleotides MPMX19_06129 and MPMX19_06130 are separated by 149 nucleotides
MPMX19_06128: MPMX19_06128 - hypothetical protein, at 313,872 to 316,703
_06128
MPMX19_06129: MPMX19_06129 - hypothetical protein, at 316,703 to 317,209
_06129
MPMX19_06130: MPMX19_06130 - hypothetical protein, at 317,359 to 319,071
_06130
Position (kb) 316
317
318 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 315.745 kb on + strand, within MPMX19_06128 at 315.832 kb on + strand, within MPMX19_06128 at 315.833 kb on - strand, within MPMX19_06128 at 315.833 kb on - strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 316.006 kb on + strand, within MPMX19_06128 at 316.006 kb on + strand, within MPMX19_06128 at 316.007 kb on - strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.019 kb on - strand, within MPMX19_06128 at 316.019 kb on - strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.313 kb on - strand, within MPMX19_06128 at 316.313 kb on - strand, within MPMX19_06128 at 316.313 kb on - strand, within MPMX19_06128 at 316.337 kb on - strand, within MPMX19_06128 at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.716 kb on - strand at 316.716 kb on - strand at 316.716 kb on - strand at 316.716 kb on - strand at 316.716 kb on - strand at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.289 kb on - strand at 317.289 kb on - strand at 317.289 kb on - strand at 317.289 kb on - strand at 317.300 kb on + strand at 317.300 kb on + strand at 317.301 kb on - strand at 317.312 kb on + strand at 317.315 kb on + strand at 317.316 kb on - strand at 317.316 kb on - strand at 317.318 kb on + strand at 317.319 kb on - strand at 317.319 kb on - strand at 317.582 kb on + strand, within MPMX19_06130 at 317.603 kb on + strand, within MPMX19_06130 at 317.603 kb on + strand, within MPMX19_06130 at 317.604 kb on - strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 315,745 + MPMX19_06128 0.66 +0.4 315,832 + MPMX19_06128 0.69 -0.5 315,833 - MPMX19_06128 0.69 -0.6 315,833 - MPMX19_06128 0.69 -0.4 315,868 + MPMX19_06128 0.70 -0.1 315,868 + MPMX19_06128 0.70 -1.1 315,868 + MPMX19_06128 0.70 -0.4 315,868 + MPMX19_06128 0.70 -0.5 315,868 + MPMX19_06128 0.70 -0.2 315,869 - MPMX19_06128 0.71 -1.5 315,869 - MPMX19_06128 0.71 -0.4 315,869 - MPMX19_06128 0.71 -1.7 315,869 - MPMX19_06128 0.71 -2.1 315,869 - MPMX19_06128 0.71 -0.2 315,869 - MPMX19_06128 0.71 -0.9 315,869 - MPMX19_06128 0.71 -1.7 315,869 - MPMX19_06128 0.71 -1.0 315,869 - MPMX19_06128 0.71 -0.2 316,006 + MPMX19_06128 0.75 +0.6 316,006 + MPMX19_06128 0.75 -1.0 316,007 - MPMX19_06128 0.75 -0.3 316,018 + MPMX19_06128 0.76 -0.0 316,018 + MPMX19_06128 0.76 -0.0 316,018 + MPMX19_06128 0.76 +0.1 316,018 + MPMX19_06128 0.76 -0.3 316,018 + MPMX19_06128 0.76 +0.4 316,019 - MPMX19_06128 0.76 -1.2 316,019 - MPMX19_06128 0.76 -1.9 316,312 + MPMX19_06128 0.86 -0.3 316,312 + MPMX19_06128 0.86 +0.6 316,312 + MPMX19_06128 0.86 -1.0 316,312 + MPMX19_06128 0.86 -0.6 316,312 + MPMX19_06128 0.86 +0.1 316,313 - MPMX19_06128 0.86 +1.6 316,313 - MPMX19_06128 0.86 +0.1 316,313 - MPMX19_06128 0.86 -1.2 316,337 - MPMX19_06128 0.87 +0.2 316,441 + -0.9 316,441 + -0.1 316,441 + -1.5 316,441 + +1.4 316,441 + -0.5 316,441 + -0.0 316,441 + -1.0 316,441 + -0.2 316,441 + +0.4 316,441 + -1.2 316,442 - -1.8 316,442 - +0.2 316,442 - -0.9 316,442 - -0.1 316,442 - -0.8 316,442 - -1.1 316,442 - +0.1 316,442 - +1.1 316,442 - +0.6 316,442 - -1.2 316,442 - -1.0 316,442 - -1.7 316,715 + +0.2 316,715 + +0.5 316,715 + +3.4 316,715 + +0.2 316,715 + -1.4 316,716 - -0.7 316,716 - -2.0 316,716 - +0.1 316,716 - -0.9 316,716 - -1.8 317,079 + MPMX19_06129 0.74 -0.5 317,079 + MPMX19_06129 0.74 -0.5 317,079 + MPMX19_06129 0.74 -1.5 317,079 + MPMX19_06129 0.74 -1.2 317,079 + MPMX19_06129 0.74 +0.5 317,080 - MPMX19_06129 0.74 +0.2 317,080 - MPMX19_06129 0.74 -1.2 317,080 - MPMX19_06129 0.74 +0.9 317,080 - MPMX19_06129 0.74 -1.5 317,203 + -0.2 317,203 + +0.1 317,203 + -1.9 317,203 + -0.2 317,203 + -1.5 317,203 + -0.2 317,203 + -0.5 317,203 + -0.5 317,203 + -0.6 317,203 + -0.5 317,203 + -0.5 317,203 + -0.2 317,203 + -0.6 317,203 + -0.9 317,203 + -0.7 317,203 + -0.6 317,203 + -0.7 317,204 - -0.5 317,204 - +1.3 317,204 - +0.0 317,204 - +0.0 317,204 - -0.3 317,204 - -1.4 317,204 - +0.7 317,204 - +0.5 317,204 - +0.7 317,204 - -0.2 317,288 + -0.8 317,288 + +0.6 317,288 + -0.8 317,288 + -1.2 317,288 + +0.2 317,288 + +0.1 317,289 - -0.5 317,289 - -0.4 317,289 - +0.7 317,289 - +0.2 317,300 + +0.4 317,300 + -0.2 317,301 - -2.7 317,312 + -0.9 317,315 + -1.4 317,316 - -2.0 317,316 - +0.1 317,318 + -0.6 317,319 - -1.2 317,319 - +1.2 317,582 + MPMX19_06130 0.13 -0.2 317,603 + MPMX19_06130 0.14 +1.1 317,603 + MPMX19_06130 0.14 -0.5 317,604 - MPMX19_06130 0.14 +1.9 317,606 + MPMX19_06130 0.14 +0.5 317,606 + MPMX19_06130 0.14 +1.1 317,606 + MPMX19_06130 0.14 -1.3 317,606 + MPMX19_06130 0.14 -1.2 317,606 + MPMX19_06130 0.14 +0.4 317,607 - MPMX19_06130 0.14 -0.2 317,607 - MPMX19_06130 0.14 +0.1 317,607 - MPMX19_06130 0.14 -1.5 317,607 - MPMX19_06130 0.14 -1.7 317,607 - MPMX19_06130 0.14 -0.5 317,607 - MPMX19_06130 0.14 -0.0 317,607 - MPMX19_06130 0.14 -1.1
Or see this region's nucleotide sequence