Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06085 and MPMX19_06086 are separated by 46 nucleotides MPMX19_06086 and MPMX19_06087 are separated by 263 nucleotides MPMX19_06087 and MPMX19_06088 are separated by 46 nucleotides
MPMX19_06085: MPMX19_06085 - hypothetical protein, at 260,470 to 261,483
_06085
MPMX19_06086: MPMX19_06086 - Citrate synthase, at 261,530 to 262,861
_06086
MPMX19_06087: MPMX19_06087 - hypothetical protein, at 263,125 to 263,370
_06087
MPMX19_06088: MPMX19_06088 - Sensor histidine kinase RcsC, at 263,417 to 267,214
_06088
Position (kb) 261
262
263 Strain fitness (log2 ratio) -2
-1
0
1 at 261.098 kb on + strand, within MPMX19_06085 at 261.850 kb on - strand, within MPMX19_06086 at 261.850 kb on - strand, within MPMX19_06086 at 261.850 kb on - strand, within MPMX19_06086 at 261.886 kb on - strand, within MPMX19_06086 at 261.886 kb on - strand, within MPMX19_06086 at 261.886 kb on - strand, within MPMX19_06086 at 261.895 kb on - strand, within MPMX19_06086 at 261.895 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.222 kb on - strand, within MPMX19_06086 at 262.240 kb on - strand, within MPMX19_06086 at 262.240 kb on - strand, within MPMX19_06086 at 262.240 kb on - strand, within MPMX19_06086 at 262.285 kb on - strand, within MPMX19_06086 at 262.285 kb on - strand, within MPMX19_06086 at 262.285 kb on - strand, within MPMX19_06086 at 262.285 kb on - strand, within MPMX19_06086 at 262.285 kb on - strand, within MPMX19_06086 at 262.285 kb on - strand, within MPMX19_06086 at 262.289 kb on - strand, within MPMX19_06086 at 262.289 kb on - strand, within MPMX19_06086 at 262.384 kb on - strand, within MPMX19_06086 at 262.384 kb on - strand, within MPMX19_06086 at 262.384 kb on - strand, within MPMX19_06086 at 262.384 kb on - strand, within MPMX19_06086 at 262.384 kb on - strand, within MPMX19_06086 at 262.384 kb on - strand, within MPMX19_06086 at 262.384 kb on - strand, within MPMX19_06086 at 262.384 kb on - strand, within MPMX19_06086 at 262.492 kb on - strand, within MPMX19_06086 at 262.492 kb on - strand, within MPMX19_06086 at 262.492 kb on - strand, within MPMX19_06086 at 262.492 kb on - strand, within MPMX19_06086 at 262.645 kb on - strand, within MPMX19_06086 at 262.702 kb on - strand, within MPMX19_06086 at 263.044 kb on - strand at 263.044 kb on - strand at 263.044 kb on - strand at 263.044 kb on - strand at 263.112 kb on - strand at 263.112 kb on - strand at 263.112 kb on - strand at 263.112 kb on - strand at 263.112 kb on - strand at 263.112 kb on - strand at 263.112 kb on - strand at 263.112 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 261,098 + MPMX19_06085 0.62 -1.8 261,850 - MPMX19_06086 0.24 -1.0 261,850 - MPMX19_06086 0.24 +0.7 261,850 - MPMX19_06086 0.24 +1.0 261,886 - MPMX19_06086 0.27 -0.5 261,886 - MPMX19_06086 0.27 -0.1 261,886 - MPMX19_06086 0.27 +0.3 261,895 - MPMX19_06086 0.27 -1.0 261,895 - MPMX19_06086 0.27 -0.4 262,222 - MPMX19_06086 0.52 -0.2 262,222 - MPMX19_06086 0.52 -1.2 262,222 - MPMX19_06086 0.52 +0.8 262,222 - MPMX19_06086 0.52 -0.5 262,222 - MPMX19_06086 0.52 -1.0 262,222 - MPMX19_06086 0.52 -0.1 262,222 - MPMX19_06086 0.52 -0.8 262,222 - MPMX19_06086 0.52 +0.2 262,222 - MPMX19_06086 0.52 -0.1 262,222 - MPMX19_06086 0.52 -1.0 262,222 - MPMX19_06086 0.52 -1.3 262,222 - MPMX19_06086 0.52 -0.8 262,222 - MPMX19_06086 0.52 -0.0 262,240 - MPMX19_06086 0.53 -2.2 262,240 - MPMX19_06086 0.53 -0.5 262,240 - MPMX19_06086 0.53 -1.9 262,285 - MPMX19_06086 0.57 +0.2 262,285 - MPMX19_06086 0.57 -1.0 262,285 - MPMX19_06086 0.57 -1.5 262,285 - MPMX19_06086 0.57 -0.3 262,285 - MPMX19_06086 0.57 +0.5 262,285 - MPMX19_06086 0.57 +0.1 262,289 - MPMX19_06086 0.57 -0.1 262,289 - MPMX19_06086 0.57 -1.2 262,384 - MPMX19_06086 0.64 -0.2 262,384 - MPMX19_06086 0.64 -1.5 262,384 - MPMX19_06086 0.64 -2.1 262,384 - MPMX19_06086 0.64 -0.1 262,384 - MPMX19_06086 0.64 -0.6 262,384 - MPMX19_06086 0.64 -1.6 262,384 - MPMX19_06086 0.64 -0.3 262,384 - MPMX19_06086 0.64 -0.8 262,492 - MPMX19_06086 0.72 -0.6 262,492 - MPMX19_06086 0.72 +0.5 262,492 - MPMX19_06086 0.72 +0.7 262,492 - MPMX19_06086 0.72 -0.3 262,645 - MPMX19_06086 0.84 +0.6 262,702 - MPMX19_06086 0.88 -1.5 263,044 - -0.5 263,044 - -0.3 263,044 - -1.0 263,044 - +0.2 263,112 - -1.0 263,112 - -0.2 263,112 - +1.1 263,112 - -0.7 263,112 - -2.0 263,112 - -0.8 263,112 - +0.4 263,112 - -0.4
Or see this region's nucleotide sequence