Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05933 and MPMX19_05934 are separated by 41 nucleotides MPMX19_05934 and MPMX19_05935 are separated by 222 nucleotides
MPMX19_05933: MPMX19_05933 - hypothetical protein, at 75,471 to 76,337
_05933
MPMX19_05934: MPMX19_05934 - Arylesterase, at 76,379 to 77,206
_05934
MPMX19_05935: MPMX19_05935 - sugar efflux transporter, at 77,429 to 78,574
_05935
Position (kb) 76
77
78 Strain fitness (log2 ratio) -2
-1
0
1
2 at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.430 kb on + strand at 75.431 kb on - strand at 75.473 kb on - strand at 75.725 kb on - strand, within MPMX19_05933 at 76.064 kb on - strand, within MPMX19_05933 at 76.076 kb on - strand, within MPMX19_05933 at 76.311 kb on - strand at 76.369 kb on - strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.875 kb on + strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 77.074 kb on - strand, within MPMX19_05934 at 77.074 kb on - strand, within MPMX19_05934 at 77.074 kb on - strand, within MPMX19_05934 at 77.074 kb on - strand, within MPMX19_05934 at 77.166 kb on + strand at 77.166 kb on + strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.285 kb on + strand at 77.285 kb on + strand at 77.285 kb on + strand at 77.285 kb on + strand at 77.286 kb on - strand at 77.286 kb on - strand at 77.286 kb on - strand at 77.357 kb on + strand at 77.378 kb on + strand at 77.379 kb on - strand at 77.388 kb on - strand at 77.564 kb on + strand, within MPMX19_05935 at 77.564 kb on + strand, within MPMX19_05935 at 77.564 kb on + strand, within MPMX19_05935 at 77.565 kb on - strand, within MPMX19_05935 at 77.565 kb on - strand, within MPMX19_05935 at 77.565 kb on - strand, within MPMX19_05935 at 77.565 kb on - strand, within MPMX19_05935 at 77.576 kb on + strand, within MPMX19_05935 at 77.577 kb on - strand, within MPMX19_05935 at 77.577 kb on - strand, within MPMX19_05935 at 77.577 kb on - strand, within MPMX19_05935 at 77.577 kb on - strand, within MPMX19_05935 at 77.696 kb on + strand, within MPMX19_05935 at 77.696 kb on + strand, within MPMX19_05935 at 77.697 kb on - strand, within MPMX19_05935 at 77.697 kb on - strand, within MPMX19_05935 at 77.789 kb on + strand, within MPMX19_05935 at 77.789 kb on + strand, within MPMX19_05935 at 77.790 kb on - strand, within MPMX19_05935 at 78.014 kb on + strand, within MPMX19_05935 at 78.014 kb on + strand, within MPMX19_05935 at 78.014 kb on + strand, within MPMX19_05935 at 78.014 kb on + strand, within MPMX19_05935 at 78.014 kb on + strand, within MPMX19_05935 at 78.015 kb on - strand, within MPMX19_05935 at 78.015 kb on - strand, within MPMX19_05935 at 78.191 kb on + strand, within MPMX19_05935 at 78.191 kb on + strand, within MPMX19_05935 at 78.191 kb on + strand, within MPMX19_05935 at 78.191 kb on + strand, within MPMX19_05935 at 78.191 kb on + strand, within MPMX19_05935 at 78.191 kb on + strand, within MPMX19_05935 at 78.191 kb on + strand, within MPMX19_05935 at 78.191 kb on + strand, within MPMX19_05935 at 78.192 kb on - strand, within MPMX19_05935 at 78.192 kb on - strand, within MPMX19_05935
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 75,398 + -1.5 75,398 + +0.2 75,398 + +0.3 75,398 + +1.6 75,398 + -1.3 75,398 + -0.5 75,398 + +1.3 75,398 + -0.1 75,398 + -0.9 75,398 + +0.3 75,398 + +0.5 75,398 + -1.1 75,398 + +0.4 75,398 + -1.1 75,398 + -0.1 75,398 + +0.3 75,398 + -1.1 75,398 + -0.5 75,398 + +0.7 75,398 + +1.0 75,398 + -1.1 75,398 + +1.3 75,402 + +0.5 75,402 + +0.5 75,402 + +0.2 75,402 + -0.2 75,402 + -1.0 75,402 + +0.7 75,402 + -0.3 75,402 + -0.4 75,402 + -0.7 75,402 + -0.6 75,402 + +0.5 75,402 + -0.2 75,402 + -0.7 75,402 + -1.6 75,402 + -0.9 75,402 + +1.3 75,402 + +1.5 75,402 + +0.5 75,402 + -0.3 75,402 + -1.1 75,402 + -0.1 75,402 + +1.6 75,403 - -0.2 75,403 - +0.5 75,403 - +1.2 75,403 - +0.4 75,403 - -1.0 75,403 - -2.1 75,403 - +0.6 75,430 + -1.2 75,431 - -0.9 75,473 - -2.4 75,725 - MPMX19_05933 0.29 -0.7 76,064 - MPMX19_05933 0.68 -0.1 76,076 - MPMX19_05933 0.70 +1.2 76,311 - +0.7 76,369 - -1.5 76,458 + -0.5 76,458 + -0.5 76,458 + -0.9 76,458 + +0.4 76,458 + -1.2 76,458 + +0.7 76,458 + +0.0 76,458 + +0.1 76,458 + +0.2 76,458 + -0.5 76,459 - +1.0 76,459 - -0.4 76,459 - -0.0 76,459 - -2.0 76,459 - -0.2 76,459 - -0.3 76,459 - +0.5 76,459 - +0.2 76,875 + MPMX19_05934 0.60 -0.5 76,876 - MPMX19_05934 0.60 -1.7 76,876 - MPMX19_05934 0.60 +0.1 76,876 - MPMX19_05934 0.60 -1.4 76,876 - MPMX19_05934 0.60 +0.1 76,876 - MPMX19_05934 0.60 -0.8 76,876 - MPMX19_05934 0.60 -0.4 76,876 - MPMX19_05934 0.60 -0.8 77,074 - MPMX19_05934 0.84 -0.5 77,074 - MPMX19_05934 0.84 -1.0 77,074 - MPMX19_05934 0.84 -1.6 77,074 - MPMX19_05934 0.84 -1.4 77,166 + -0.3 77,166 + +0.2 77,167 - -1.0 77,167 - -0.0 77,167 - +0.1 77,167 - -0.4 77,167 - +1.5 77,167 - -1.5 77,285 + +0.7 77,285 + -0.7 77,285 + -1.8 77,285 + -1.2 77,286 - +1.6 77,286 - -0.4 77,286 - -0.8 77,357 + -1.8 77,378 + +0.4 77,379 - +0.1 77,388 - -1.3 77,564 + MPMX19_05935 0.12 -0.6 77,564 + MPMX19_05935 0.12 +0.2 77,564 + MPMX19_05935 0.12 -1.0 77,565 - MPMX19_05935 0.12 -1.5 77,565 - MPMX19_05935 0.12 -0.7 77,565 - MPMX19_05935 0.12 -0.1 77,565 - MPMX19_05935 0.12 +1.4 77,576 + MPMX19_05935 0.13 -0.2 77,577 - MPMX19_05935 0.13 -0.2 77,577 - MPMX19_05935 0.13 -0.5 77,577 - MPMX19_05935 0.13 +0.2 77,577 - MPMX19_05935 0.13 +1.1 77,696 + MPMX19_05935 0.23 +0.4 77,696 + MPMX19_05935 0.23 -0.1 77,697 - MPMX19_05935 0.23 +1.0 77,697 - MPMX19_05935 0.23 -0.3 77,789 + MPMX19_05935 0.31 -0.9 77,789 + MPMX19_05935 0.31 -0.2 77,790 - MPMX19_05935 0.32 +1.4 78,014 + MPMX19_05935 0.51 -0.1 78,014 + MPMX19_05935 0.51 -0.8 78,014 + MPMX19_05935 0.51 -0.1 78,014 + MPMX19_05935 0.51 -1.0 78,014 + MPMX19_05935 0.51 -0.3 78,015 - MPMX19_05935 0.51 +2.0 78,015 - MPMX19_05935 0.51 +0.6 78,191 + MPMX19_05935 0.66 +0.4 78,191 + MPMX19_05935 0.66 -0.1 78,191 + MPMX19_05935 0.66 -0.7 78,191 + MPMX19_05935 0.66 +1.0 78,191 + MPMX19_05935 0.66 -1.2 78,191 + MPMX19_05935 0.66 -0.0 78,191 + MPMX19_05935 0.66 -0.7 78,191 + MPMX19_05935 0.66 +0.1 78,192 - MPMX19_05935 0.67 -0.5 78,192 - MPMX19_05935 0.67 -0.2
Or see this region's nucleotide sequence