Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05932 and MPMX19_05933 are separated by 119 nucleotides MPMX19_05933 and MPMX19_05934 are separated by 41 nucleotides
MPMX19_05932: MPMX19_05932 - Bifunctional protein PutA, at 71,593 to 75,351
_05932
MPMX19_05933: MPMX19_05933 - hypothetical protein, at 75,471 to 76,337
_05933
MPMX19_05934: MPMX19_05934 - Arylesterase, at 76,379 to 77,206
_05934
Position (kb) 75
76
77 Strain fitness (log2 ratio) -2
-1
0
1
2 at 74.560 kb on + strand, within MPMX19_05932 at 74.641 kb on + strand, within MPMX19_05932 at 74.641 kb on + strand, within MPMX19_05932 at 74.641 kb on + strand, within MPMX19_05932 at 74.641 kb on + strand, within MPMX19_05932 at 74.641 kb on + strand, within MPMX19_05932 at 74.641 kb on + strand, within MPMX19_05932 at 74.642 kb on - strand, within MPMX19_05932 at 74.642 kb on - strand, within MPMX19_05932 at 74.642 kb on - strand, within MPMX19_05932 at 74.642 kb on - strand, within MPMX19_05932 at 74.642 kb on - strand, within MPMX19_05932 at 74.642 kb on - strand, within MPMX19_05932 at 74.642 kb on - strand, within MPMX19_05932 at 74.678 kb on + strand, within MPMX19_05932 at 74.678 kb on + strand, within MPMX19_05932 at 74.679 kb on - strand, within MPMX19_05932 at 74.679 kb on - strand, within MPMX19_05932 at 74.737 kb on + strand, within MPMX19_05932 at 74.737 kb on + strand, within MPMX19_05932 at 74.737 kb on + strand, within MPMX19_05932 at 74.738 kb on - strand, within MPMX19_05932 at 74.738 kb on - strand, within MPMX19_05932 at 74.738 kb on - strand, within MPMX19_05932 at 74.738 kb on - strand, within MPMX19_05932 at 74.759 kb on + strand, within MPMX19_05932 at 74.759 kb on + strand, within MPMX19_05932 at 74.760 kb on - strand, within MPMX19_05932 at 74.760 kb on - strand, within MPMX19_05932 at 74.760 kb on - strand, within MPMX19_05932 at 74.801 kb on + strand, within MPMX19_05932 at 74.801 kb on + strand, within MPMX19_05932 at 74.801 kb on + strand, within MPMX19_05932 at 74.802 kb on - strand, within MPMX19_05932 at 74.802 kb on - strand, within MPMX19_05932 at 74.802 kb on - strand, within MPMX19_05932 at 74.944 kb on + strand, within MPMX19_05932 at 74.944 kb on + strand, within MPMX19_05932 at 74.945 kb on - strand, within MPMX19_05932 at 74.945 kb on - strand, within MPMX19_05932 at 74.945 kb on - strand, within MPMX19_05932 at 74.945 kb on - strand, within MPMX19_05932 at 74.945 kb on - strand, within MPMX19_05932 at 74.967 kb on + strand, within MPMX19_05932 at 74.968 kb on - strand, within MPMX19_05932 at 75.001 kb on + strand at 75.001 kb on + strand at 75.002 kb on - strand at 75.002 kb on - strand at 75.002 kb on - strand at 75.002 kb on - strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.398 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.402 kb on + strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.403 kb on - strand at 75.430 kb on + strand at 75.431 kb on - strand at 75.473 kb on - strand at 75.725 kb on - strand, within MPMX19_05933 at 76.064 kb on - strand, within MPMX19_05933 at 76.076 kb on - strand, within MPMX19_05933 at 76.311 kb on - strand at 76.369 kb on - strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.458 kb on + strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.459 kb on - strand at 76.875 kb on + strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 76.876 kb on - strand, within MPMX19_05934 at 77.074 kb on - strand, within MPMX19_05934 at 77.074 kb on - strand, within MPMX19_05934 at 77.074 kb on - strand, within MPMX19_05934 at 77.074 kb on - strand, within MPMX19_05934 at 77.166 kb on + strand at 77.166 kb on + strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.167 kb on - strand at 77.285 kb on + strand at 77.285 kb on + strand at 77.285 kb on + strand at 77.285 kb on + strand at 77.286 kb on - strand at 77.286 kb on - strand at 77.286 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 74,560 + MPMX19_05932 0.79 -0.1 74,641 + MPMX19_05932 0.81 +0.8 74,641 + MPMX19_05932 0.81 -0.4 74,641 + MPMX19_05932 0.81 -0.4 74,641 + MPMX19_05932 0.81 +1.4 74,641 + MPMX19_05932 0.81 -0.1 74,641 + MPMX19_05932 0.81 -0.5 74,642 - MPMX19_05932 0.81 +0.2 74,642 - MPMX19_05932 0.81 +0.6 74,642 - MPMX19_05932 0.81 -0.1 74,642 - MPMX19_05932 0.81 +0.8 74,642 - MPMX19_05932 0.81 -1.4 74,642 - MPMX19_05932 0.81 +0.2 74,642 - MPMX19_05932 0.81 -1.1 74,678 + MPMX19_05932 0.82 +0.9 74,678 + MPMX19_05932 0.82 +0.2 74,679 - MPMX19_05932 0.82 +1.8 74,679 - MPMX19_05932 0.82 +0.5 74,737 + MPMX19_05932 0.84 +0.6 74,737 + MPMX19_05932 0.84 -1.2 74,737 + MPMX19_05932 0.84 -1.9 74,738 - MPMX19_05932 0.84 -1.1 74,738 - MPMX19_05932 0.84 +0.3 74,738 - MPMX19_05932 0.84 +0.3 74,738 - MPMX19_05932 0.84 -0.5 74,759 + MPMX19_05932 0.84 +1.2 74,759 + MPMX19_05932 0.84 -0.0 74,760 - MPMX19_05932 0.84 +1.2 74,760 - MPMX19_05932 0.84 -0.2 74,760 - MPMX19_05932 0.84 +1.4 74,801 + MPMX19_05932 0.85 +0.5 74,801 + MPMX19_05932 0.85 -0.4 74,801 + MPMX19_05932 0.85 -0.5 74,802 - MPMX19_05932 0.85 +1.4 74,802 - MPMX19_05932 0.85 -0.5 74,802 - MPMX19_05932 0.85 -0.5 74,944 + MPMX19_05932 0.89 -0.3 74,944 + MPMX19_05932 0.89 -1.1 74,945 - MPMX19_05932 0.89 -0.8 74,945 - MPMX19_05932 0.89 -0.4 74,945 - MPMX19_05932 0.89 -0.7 74,945 - MPMX19_05932 0.89 -1.1 74,945 - MPMX19_05932 0.89 -1.7 74,967 + MPMX19_05932 0.90 -1.7 74,968 - MPMX19_05932 0.90 +0.8 75,001 + +0.5 75,001 + +0.2 75,002 - +1.6 75,002 - -0.2 75,002 - -1.1 75,002 - -0.1 75,398 + -1.5 75,398 + +0.2 75,398 + +0.3 75,398 + +1.6 75,398 + -1.3 75,398 + -0.5 75,398 + +1.3 75,398 + -0.1 75,398 + -0.9 75,398 + +0.3 75,398 + +0.5 75,398 + -1.1 75,398 + +0.4 75,398 + -1.1 75,398 + -0.1 75,398 + +0.3 75,398 + -1.1 75,398 + -0.5 75,398 + +0.7 75,398 + +1.0 75,398 + -1.1 75,398 + +1.3 75,402 + +0.5 75,402 + +0.5 75,402 + +0.2 75,402 + -0.2 75,402 + -1.0 75,402 + +0.7 75,402 + -0.3 75,402 + -0.4 75,402 + -0.7 75,402 + -0.6 75,402 + +0.5 75,402 + -0.2 75,402 + -0.7 75,402 + -1.6 75,402 + -0.9 75,402 + +1.3 75,402 + +1.5 75,402 + +0.5 75,402 + -0.3 75,402 + -1.1 75,402 + -0.1 75,402 + +1.6 75,403 - -0.2 75,403 - +0.5 75,403 - +1.2 75,403 - +0.4 75,403 - -1.0 75,403 - -2.1 75,403 - +0.6 75,430 + -1.2 75,431 - -0.9 75,473 - -2.4 75,725 - MPMX19_05933 0.29 -0.7 76,064 - MPMX19_05933 0.68 -0.1 76,076 - MPMX19_05933 0.70 +1.2 76,311 - +0.7 76,369 - -1.5 76,458 + -0.5 76,458 + -0.5 76,458 + -0.9 76,458 + +0.4 76,458 + -1.2 76,458 + +0.7 76,458 + +0.0 76,458 + +0.1 76,458 + +0.2 76,458 + -0.5 76,459 - +1.0 76,459 - -0.4 76,459 - -0.0 76,459 - -2.0 76,459 - -0.2 76,459 - -0.3 76,459 - +0.5 76,459 - +0.2 76,875 + MPMX19_05934 0.60 -0.5 76,876 - MPMX19_05934 0.60 -1.7 76,876 - MPMX19_05934 0.60 +0.1 76,876 - MPMX19_05934 0.60 -1.4 76,876 - MPMX19_05934 0.60 +0.1 76,876 - MPMX19_05934 0.60 -0.8 76,876 - MPMX19_05934 0.60 -0.4 76,876 - MPMX19_05934 0.60 -0.8 77,074 - MPMX19_05934 0.84 -0.5 77,074 - MPMX19_05934 0.84 -1.0 77,074 - MPMX19_05934 0.84 -1.6 77,074 - MPMX19_05934 0.84 -1.4 77,166 + -0.3 77,166 + +0.2 77,167 - -1.0 77,167 - -0.0 77,167 - +0.1 77,167 - -0.4 77,167 - +1.5 77,167 - -1.5 77,285 + +0.7 77,285 + -0.7 77,285 + -1.8 77,285 + -1.2 77,286 - +1.6 77,286 - -0.4 77,286 - -0.8
Or see this region's nucleotide sequence