Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05559 and MPMX19_05560 overlap by 1 nucleotides MPMX19_05560 and MPMX19_05561 overlap by 29 nucleotides MPMX19_05561 and MPMX19_05562 are separated by 2 nucleotides
MPMX19_05559: MPMX19_05559 - hypothetical protein, at 267,161 to 269,395
_05559
MPMX19_05560: MPMX19_05560 - hypothetical protein, at 269,395 to 269,634
_05560
MPMX19_05561: MPMX19_05561 - 5,6-dimethylbenzimidazole synthase, at 269,606 to 270,262
_05561
MPMX19_05562: MPMX19_05562 - Hydrogenobyrinate a,c-diamide synthase, at 270,265 to 271,578
_05562
Position (kb) 269
270
271 Strain fitness (log2 ratio) -2
-1
0
1 at 269.021 kb on + strand, within MPMX19_05559 at 269.021 kb on + strand, within MPMX19_05559 at 269.021 kb on + strand, within MPMX19_05559 at 269.021 kb on + strand, within MPMX19_05559 at 269.021 kb on + strand, within MPMX19_05559 at 269.021 kb on + strand, within MPMX19_05559 at 269.021 kb on + strand, within MPMX19_05559 at 269.021 kb on + strand, within MPMX19_05559 at 269.021 kb on + strand, within MPMX19_05559 at 269.021 kb on + strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.022 kb on - strand, within MPMX19_05559 at 269.327 kb on + strand at 269.328 kb on - strand at 269.408 kb on - strand at 269.408 kb on - strand at 269.408 kb on - strand at 269.408 kb on - strand at 269.727 kb on + strand, within MPMX19_05561 at 269.727 kb on + strand, within MPMX19_05561 at 269.728 kb on - strand, within MPMX19_05561 at 269.728 kb on - strand, within MPMX19_05561 at 269.728 kb on - strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.986 kb on - strand, within MPMX19_05561 at 269.986 kb on - strand, within MPMX19_05561 at 269.986 kb on - strand, within MPMX19_05561 at 270.222 kb on + strand at 270.222 kb on + strand at 270.222 kb on + strand at 270.222 kb on + strand at 270.223 kb on - strand at 270.223 kb on - strand at 270.223 kb on - strand at 270.223 kb on - strand at 270.223 kb on - strand at 270.223 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 269,021 + MPMX19_05559 0.83 +0.5 269,021 + MPMX19_05559 0.83 +0.1 269,021 + MPMX19_05559 0.83 +0.7 269,021 + MPMX19_05559 0.83 +0.7 269,021 + MPMX19_05559 0.83 +1.2 269,021 + MPMX19_05559 0.83 -0.0 269,021 + MPMX19_05559 0.83 -0.8 269,021 + MPMX19_05559 0.83 +0.7 269,021 + MPMX19_05559 0.83 +0.6 269,021 + MPMX19_05559 0.83 +0.4 269,022 - MPMX19_05559 0.83 -1.5 269,022 - MPMX19_05559 0.83 -0.4 269,022 - MPMX19_05559 0.83 -0.0 269,022 - MPMX19_05559 0.83 +0.6 269,022 - MPMX19_05559 0.83 -0.5 269,022 - MPMX19_05559 0.83 -1.8 269,022 - MPMX19_05559 0.83 -1.0 269,022 - MPMX19_05559 0.83 -1.8 269,022 - MPMX19_05559 0.83 -0.3 269,022 - MPMX19_05559 0.83 +0.1 269,022 - MPMX19_05559 0.83 -0.5 269,022 - MPMX19_05559 0.83 -2.4 269,022 - MPMX19_05559 0.83 -1.3 269,022 - MPMX19_05559 0.83 -1.8 269,022 - MPMX19_05559 0.83 -0.4 269,022 - MPMX19_05559 0.83 -1.5 269,022 - MPMX19_05559 0.83 +1.5 269,022 - MPMX19_05559 0.83 -1.8 269,327 + -1.0 269,328 - -0.1 269,408 - +0.4 269,408 - -0.3 269,408 - +0.5 269,408 - +0.1 269,727 + MPMX19_05561 0.18 -1.2 269,727 + MPMX19_05561 0.18 -2.2 269,728 - MPMX19_05561 0.19 +0.6 269,728 - MPMX19_05561 0.19 -0.4 269,728 - MPMX19_05561 0.19 -0.5 269,865 + MPMX19_05561 0.39 +0.3 269,865 + MPMX19_05561 0.39 -2.0 269,865 + MPMX19_05561 0.39 -0.8 269,865 + MPMX19_05561 0.39 -1.8 269,865 + MPMX19_05561 0.39 -1.4 269,866 - MPMX19_05561 0.40 +0.8 269,866 - MPMX19_05561 0.40 +0.1 269,866 - MPMX19_05561 0.40 -1.8 269,866 - MPMX19_05561 0.40 -0.1 269,866 - MPMX19_05561 0.40 -1.1 269,985 + MPMX19_05561 0.58 -1.4 269,985 + MPMX19_05561 0.58 -0.8 269,985 + MPMX19_05561 0.58 -1.7 269,985 + MPMX19_05561 0.58 -1.1 269,985 + MPMX19_05561 0.58 +0.9 269,986 - MPMX19_05561 0.58 -0.0 269,986 - MPMX19_05561 0.58 +1.1 269,986 - MPMX19_05561 0.58 -0.1 270,222 + -0.7 270,222 + +0.1 270,222 + +1.1 270,222 + -0.8 270,223 - -1.9 270,223 - -1.7 270,223 - -0.4 270,223 - -2.0 270,223 - -0.0 270,223 - -1.5
Or see this region's nucleotide sequence