Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05269 and MPMX19_05270 are separated by 30 nucleotides MPMX19_05270 and MPMX19_05271 are separated by 95 nucleotides MPMX19_05271 and MPMX19_05272 are separated by 20 nucleotides MPMX19_05272 and MPMX19_05273 are separated by 11 nucleotides
MPMX19_05269: MPMX19_05269 - hypothetical protein, at 804,104 to 804,937
_05269
MPMX19_05270: MPMX19_05270 - hypothetical protein, at 804,968 to 805,495
_05270
MPMX19_05271: MPMX19_05271 - hypothetical protein, at 805,591 to 805,746
_05271
MPMX19_05272: MPMX19_05272 - hypothetical protein, at 805,767 to 806,069
_05272
MPMX19_05273: MPMX19_05273 - hypothetical protein, at 806,081 to 806,695
_05273
Position (kb) 805
806 Strain fitness (log2 ratio) -2
-1
0
1 at 804.935 kb on + strand at 804.969 kb on + strand at 804.969 kb on + strand at 804.970 kb on - strand at 804.970 kb on - strand at 804.994 kb on - strand at 805.258 kb on + strand, within MPMX19_05270 at 805.258 kb on + strand, within MPMX19_05270 at 805.258 kb on + strand, within MPMX19_05270 at 805.258 kb on + strand, within MPMX19_05270 at 805.259 kb on - strand, within MPMX19_05270 at 805.259 kb on - strand, within MPMX19_05270 at 805.259 kb on - strand, within MPMX19_05270 at 805.259 kb on - strand, within MPMX19_05270 at 805.259 kb on - strand, within MPMX19_05270 at 805.259 kb on - strand, within MPMX19_05270 at 805.269 kb on + strand, within MPMX19_05270 at 805.269 kb on + strand, within MPMX19_05270 at 805.269 kb on + strand, within MPMX19_05270 at 805.269 kb on + strand, within MPMX19_05270 at 805.269 kb on + strand, within MPMX19_05270 at 805.270 kb on - strand, within MPMX19_05270 at 805.270 kb on - strand, within MPMX19_05270 at 805.270 kb on - strand, within MPMX19_05270 at 805.270 kb on - strand, within MPMX19_05270 at 805.270 kb on - strand, within MPMX19_05270 at 805.371 kb on + strand, within MPMX19_05270 at 805.371 kb on + strand, within MPMX19_05270 at 805.371 kb on + strand, within MPMX19_05270 at 805.372 kb on - strand, within MPMX19_05270 at 805.372 kb on - strand, within MPMX19_05270 at 805.372 kb on - strand, within MPMX19_05270 at 805.372 kb on - strand, within MPMX19_05270 at 805.540 kb on + strand at 805.540 kb on + strand at 805.540 kb on + strand at 805.540 kb on + strand at 805.540 kb on + strand at 805.540 kb on + strand at 805.541 kb on - strand at 805.541 kb on - strand at 805.541 kb on - strand at 805.541 kb on - strand at 805.541 kb on - strand at 805.541 kb on - strand at 805.541 kb on - strand at 805.541 kb on - strand at 805.546 kb on + strand at 805.547 kb on - strand at 805.547 kb on - strand at 805.547 kb on - strand at 805.599 kb on + strand at 805.679 kb on + strand, within MPMX19_05271 at 805.679 kb on + strand, within MPMX19_05271 at 805.679 kb on + strand, within MPMX19_05271 at 805.679 kb on + strand, within MPMX19_05271 at 805.734 kb on + strand at 805.734 kb on + strand at 805.734 kb on + strand at 805.734 kb on + strand at 805.734 kb on + strand at 805.734 kb on + strand at 805.734 kb on + strand at 805.735 kb on - strand at 805.735 kb on - strand at 805.735 kb on - strand at 805.735 kb on - strand at 805.735 kb on - strand at 805.735 kb on - strand at 805.735 kb on - strand at 805.891 kb on + strand, within MPMX19_05272 at 805.891 kb on + strand, within MPMX19_05272 at 805.891 kb on + strand, within MPMX19_05272 at 805.891 kb on + strand, within MPMX19_05272 at 805.891 kb on + strand, within MPMX19_05272 at 805.891 kb on + strand, within MPMX19_05272 at 805.892 kb on - strand, within MPMX19_05272 at 805.892 kb on - strand, within MPMX19_05272 at 805.892 kb on - strand, within MPMX19_05272 at 805.892 kb on - strand, within MPMX19_05272 at 806.094 kb on + strand at 806.094 kb on + strand at 806.094 kb on + strand at 806.094 kb on + strand at 806.094 kb on + strand at 806.094 kb on + strand at 806.095 kb on - strand at 806.095 kb on - strand at 806.095 kb on - strand at 806.095 kb on - strand at 806.095 kb on - strand at 806.095 kb on - strand at 806.106 kb on + strand at 806.106 kb on + strand at 806.107 kb on - strand at 806.259 kb on + strand, within MPMX19_05273 at 806.259 kb on + strand, within MPMX19_05273 at 806.259 kb on + strand, within MPMX19_05273 at 806.259 kb on + strand, within MPMX19_05273 at 806.260 kb on - strand, within MPMX19_05273 at 806.260 kb on - strand, within MPMX19_05273 at 806.260 kb on - strand, within MPMX19_05273 at 806.260 kb on - strand, within MPMX19_05273 at 806.260 kb on - strand, within MPMX19_05273 at 806.316 kb on + strand, within MPMX19_05273 at 806.316 kb on + strand, within MPMX19_05273 at 806.316 kb on + strand, within MPMX19_05273 at 806.316 kb on + strand, within MPMX19_05273 at 806.317 kb on - strand, within MPMX19_05273 at 806.317 kb on - strand, within MPMX19_05273 at 806.433 kb on + strand, within MPMX19_05273 at 806.434 kb on - strand, within MPMX19_05273 at 806.434 kb on - strand, within MPMX19_05273 at 806.723 kb on + strand at 806.723 kb on + strand at 806.723 kb on + strand at 806.724 kb on - strand at 806.724 kb on - strand at 806.724 kb on - strand at 806.735 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 804,935 + +0.7 804,969 + -0.6 804,969 + -0.4 804,970 - -0.3 804,970 - -0.5 804,994 - -1.1 805,258 + MPMX19_05270 0.55 -0.1 805,258 + MPMX19_05270 0.55 -0.6 805,258 + MPMX19_05270 0.55 -1.1 805,258 + MPMX19_05270 0.55 +0.1 805,259 - MPMX19_05270 0.55 -0.3 805,259 - MPMX19_05270 0.55 +0.7 805,259 - MPMX19_05270 0.55 -2.3 805,259 - MPMX19_05270 0.55 -1.3 805,259 - MPMX19_05270 0.55 -1.3 805,259 - MPMX19_05270 0.55 +0.2 805,269 + MPMX19_05270 0.57 +1.7 805,269 + MPMX19_05270 0.57 -0.9 805,269 + MPMX19_05270 0.57 -1.2 805,269 + MPMX19_05270 0.57 -1.6 805,269 + MPMX19_05270 0.57 +0.3 805,270 - MPMX19_05270 0.57 -0.2 805,270 - MPMX19_05270 0.57 -1.1 805,270 - MPMX19_05270 0.57 +0.9 805,270 - MPMX19_05270 0.57 -0.5 805,270 - MPMX19_05270 0.57 -2.7 805,371 + MPMX19_05270 0.76 -1.6 805,371 + MPMX19_05270 0.76 -1.0 805,371 + MPMX19_05270 0.76 -0.8 805,372 - MPMX19_05270 0.77 -1.1 805,372 - MPMX19_05270 0.77 -1.7 805,372 - MPMX19_05270 0.77 +1.1 805,372 - MPMX19_05270 0.77 -0.1 805,540 + -1.3 805,540 + +0.7 805,540 + +0.7 805,540 + -0.2 805,540 + -1.1 805,540 + -1.8 805,541 - -0.1 805,541 - -0.3 805,541 - -0.2 805,541 - +0.4 805,541 - +0.1 805,541 - -0.8 805,541 - +0.7 805,541 - +0.1 805,546 + -1.3 805,547 - +0.7 805,547 - -0.5 805,547 - +0.4 805,599 + +0.7 805,679 + MPMX19_05271 0.56 -2.6 805,679 + MPMX19_05271 0.56 -0.1 805,679 + MPMX19_05271 0.56 -2.3 805,679 + MPMX19_05271 0.56 -0.7 805,734 + -0.4 805,734 + -2.1 805,734 + +0.2 805,734 + -1.6 805,734 + -1.4 805,734 + +0.4 805,734 + +0.5 805,735 - +0.5 805,735 - +0.7 805,735 - -1.6 805,735 - +1.1 805,735 - -1.2 805,735 - -1.2 805,735 - -1.2 805,891 + MPMX19_05272 0.41 -1.0 805,891 + MPMX19_05272 0.41 -0.9 805,891 + MPMX19_05272 0.41 +0.7 805,891 + MPMX19_05272 0.41 -1.1 805,891 + MPMX19_05272 0.41 -0.6 805,891 + MPMX19_05272 0.41 -0.6 805,892 - MPMX19_05272 0.41 -0.7 805,892 - MPMX19_05272 0.41 -0.8 805,892 - MPMX19_05272 0.41 +1.0 805,892 - MPMX19_05272 0.41 -0.7 806,094 + +0.1 806,094 + -1.6 806,094 + +0.4 806,094 + -1.4 806,094 + -0.9 806,094 + -0.2 806,095 - -1.3 806,095 - +0.0 806,095 - +0.3 806,095 - +1.4 806,095 - +0.3 806,095 - +1.7 806,106 + +0.3 806,106 + +0.1 806,107 - +0.1 806,259 + MPMX19_05273 0.29 -1.2 806,259 + MPMX19_05273 0.29 -0.5 806,259 + MPMX19_05273 0.29 -0.1 806,259 + MPMX19_05273 0.29 -0.9 806,260 - MPMX19_05273 0.29 -0.6 806,260 - MPMX19_05273 0.29 -0.1 806,260 - MPMX19_05273 0.29 +1.4 806,260 - MPMX19_05273 0.29 +1.7 806,260 - MPMX19_05273 0.29 +0.6 806,316 + MPMX19_05273 0.38 -0.3 806,316 + MPMX19_05273 0.38 -0.0 806,316 + MPMX19_05273 0.38 +0.2 806,316 + MPMX19_05273 0.38 -0.5 806,317 - MPMX19_05273 0.38 +0.7 806,317 - MPMX19_05273 0.38 +0.3 806,433 + MPMX19_05273 0.57 +0.4 806,434 - MPMX19_05273 0.57 +0.3 806,434 - MPMX19_05273 0.57 +1.3 806,723 + -2.4 806,723 + -0.4 806,723 + -0.7 806,724 - -1.6 806,724 - -0.0 806,724 - +0.4 806,735 - -1.7
Or see this region's nucleotide sequence