Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05244

Experiment: NF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NF
				remove
772,568	+			-1.3
772,568	+			-0.3
772,568	+			+0.6
772,568	+			+0.9
772,568	+			-2.3
772,568	+			-0.2
772,568	+			-1.2
772,568	+			+0.0
772,568	+			-0.4
772,568	+			+0.4
772,568	+			+1.1
772,568	+			-0.9
772,568	+			-1.5
772,568	+			-0.8
772,568	+			-0.7
772,568	+			-1.0
772,568	+			+0.7
772,568	+			+1.1
772,568	+			+0.5
772,568	+			+0.3
772,568	+			+1.2
772,568	+			+0.4
772,568	+			+0.3
772,568	+			-0.9
772,568	+			-0.9
772,568	+			+0.1
772,568	+			-1.9
772,568	+			-0.2
772,568	+			-0.2
772,568	+			-0.1
772,568	+			-0.9
772,568	+			-0.9
772,568	+			+0.5
772,568	+			+0.7
772,568	+			-1.2
772,568	+			-1.8
772,568	+			+0.5
772,569	-			+0.9
772,569	-			+0.0
772,569	-			-0.4
772,569	-			-1.9
772,569	-			+0.8
772,569	-			+0.1
772,569	-			+1.1
772,569	-			-0.1
772,569	-			+0.6
772,569	-			+0.4
772,569	-			+0.2
772,569	-			+0.4
772,569	-			+0.6
772,569	-			-0.6
772,569	-			-0.5
772,569	-			-0.5
772,569	-			-0.4
772,569	-			+1.3
772,569	-			+0.6
772,569	-			-1.5
772,569	-			+1.2
772,569	-			-0.3
772,569	-			-0.9
772,569	-			+1.0
772,569	-			+0.1
772,569	-			-0.3
772,569	-			-0.1
772,569	-			-0.1
772,569	-			-0.4
772,569	-			-0.7
772,569	-			-2.6
772,569	-			+0.1
772,569	-			-0.9
772,569	-			+0.3
772,569	-			+1.1
772,569	-			+0.3
772,577	+			-1.9
772,578	-			-1.3
772,610	+			+0.2
772,610	+			+0.1
772,610	+			-0.5
772,610	+			-1.2
772,610	+			+0.3
772,610	+			-0.7
772,610	+			-1.3
772,610	+			-2.5
772,610	+			-0.5
772,610	+			-0.2
772,610	+			-0.2
772,610	+			-1.7
772,610	+			+0.3
772,610	+			-0.3
772,611	-			-0.5
772,611	-			-1.3
772,611	-			-2.1
772,611	-			-0.7
772,611	-			-1.2
772,611	-			-0.1
772,611	-			-2.7
772,611	-			-0.6
772,611	-			+0.2
772,611	-			-0.6
772,611	-			-0.6
772,611	-			-0.3
772,634	+			-1.7
772,634	+			+0.7
772,634	+			+0.6
772,634	+			+0.2
772,634	+			-1.6
772,634	+			-0.6
772,635	-			+0.7
772,635	-			+0.8
772,635	-			-0.1
772,635	-			-0.2
772,635	-			-1.7
772,655	+	MPMX19_05243	0.12	+0.3
772,655	+	MPMX19_05243	0.12	-2.3
772,655	+	MPMX19_05243	0.12	-1.4
772,655	+	MPMX19_05243	0.12	+0.7
772,655	+	MPMX19_05243	0.12	+1.3
772,655	+	MPMX19_05243	0.12	+0.1
772,655	+	MPMX19_05243	0.12	+0.5
772,656	-	MPMX19_05243	0.12	-0.2
772,656	-	MPMX19_05243	0.12	+0.1
772,656	-	MPMX19_05243	0.12	+0.9
772,656	-	MPMX19_05243	0.12	+0.4
772,656	-	MPMX19_05243	0.12	+0.3
772,730	+	MPMX19_05243	0.19	-1.1
772,730	+	MPMX19_05243	0.19	-2.3
772,731	-	MPMX19_05243	0.19	-0.7
772,731	-	MPMX19_05243	0.19	+0.5
772,883	+	MPMX19_05243	0.34	-1.4
772,884	-	MPMX19_05243	0.34	-1.4
773,042	+	MPMX19_05243	0.50	-0.5
773,043	-	MPMX19_05243	0.50	-0.5
773,043	-	MPMX19_05243	0.50	-0.8
773,043	-	MPMX19_05243	0.50	-0.1
773,043	-	MPMX19_05243	0.50	+0.7
773,043	-	MPMX19_05243	0.50	+0.1
773,043	-	MPMX19_05243	0.50	+1.1
773,043	-	MPMX19_05243	0.50	-2.0
773,043	-	MPMX19_05243	0.50	+0.3
773,315	+	MPMX19_05243	0.78	-0.8
773,315	+	MPMX19_05243	0.78	-0.3
773,315	+	MPMX19_05243	0.78	-1.1
773,315	+	MPMX19_05243	0.78	-1.3
773,315	+	MPMX19_05243	0.78	+0.7
773,315	+	MPMX19_05243	0.78	-0.1
773,316	-	MPMX19_05243	0.78	-0.6
773,316	-	MPMX19_05243	0.78	-0.4
773,316	-	MPMX19_05243	0.78	+0.3
773,316	-	MPMX19_05243	0.78	-2.7
773,316	-	MPMX19_05243	0.78	-0.7
773,426	+	MPMX19_05243	0.89	+0.7
773,426	+	MPMX19_05243	0.89	-1.2
773,426	+	MPMX19_05243	0.89	-0.9
773,426	+	MPMX19_05243	0.89	+0.5
773,426	+	MPMX19_05243	0.89	-1.6
773,426	+	MPMX19_05243	0.89	-0.2
773,426	+	MPMX19_05243	0.89	-0.2
773,427	-	MPMX19_05243	0.89	+0.3
773,427	-	MPMX19_05243	0.89	-0.4
773,427	-	MPMX19_05243	0.89	-1.1
773,427	-	MPMX19_05243	0.89	-0.9
773,507	+			+0.3
773,507	+			-1.8
773,507	+			+1.2
773,507	+			-0.5
773,508	-			+0.7
773,508	-			-0.6
773,508	-			+0.7
773,508	-			-0.5
773,508	-			-0.6
773,566	+			-1.1
773,567	-			-0.7
773,567	-			-1.4
773,567	-			-0.5
773,567	-			-0.9
773,567	-			-0.9
773,575	+			-0.6
773,575	+			-0.1
773,576	-			-0.6
773,576	-			-1.3
773,576	-			+0.7
773,608	+			-1.2
773,608	+			+1.1
773,609	-			-0.7
773,609	-			-1.5
773,632	+			+0.1
773,632	+			-1.0
773,632	+			-0.5
773,632	+			+0.4
773,632	+			+0.3
773,632	+			+0.1
773,632	+			+1.1
773,632	+			-1.6
773,632	+			-0.1
773,632	+			-0.7
773,633	-			-0.5
773,633	-			+1.2
773,633	-			+1.7
773,633	-			+1.7
773,633	-			-0.2
773,633	-			+0.3
773,633	-			+0.3
773,633	-			-0.9
773,633	-			+0.8
773,633	-			-0.0
773,653	+	MPMX19_05244	0.10	+0.1
773,654	-	MPMX19_05244	0.11	-0.3
773,654	-	MPMX19_05244	0.11	-1.7
773,654	-	MPMX19_05244	0.11	-0.5
773,654	-	MPMX19_05244	0.11	-0.5
773,654	-	MPMX19_05244	0.11	+0.4
773,654	-	MPMX19_05244	0.11	+0.2
773,654	-	MPMX19_05244	0.11	+0.2
773,654	-	MPMX19_05244	0.11	+0.1
773,654	-	MPMX19_05244	0.11	+0.1
773,654	-	MPMX19_05244	0.11	-1.2
773,654	-	MPMX19_05244	0.11	+0.4
773,654	-	MPMX19_05244	0.11	-0.6
773,654	-	MPMX19_05244	0.11	-0.2
773,656	+	MPMX19_05244	0.11	-0.4
773,656	+	MPMX19_05244	0.11	-1.2
773,656	+	MPMX19_05244	0.11	-0.5
773,656	+	MPMX19_05244	0.11	-0.2
773,656	+	MPMX19_05244	0.11	-2.4
773,656	+	MPMX19_05244	0.11	+0.1
773,656	+	MPMX19_05244	0.11	-0.0
773,656	+	MPMX19_05244	0.11	+2.4
773,657	-	MPMX19_05244	0.11	+0.4
773,657	-	MPMX19_05244	0.11	+0.1
773,657	-	MPMX19_05244	0.11	-1.1
773,657	-	MPMX19_05244	0.11	+0.7
773,803	+	MPMX19_05244	0.25	-1.1
773,803	+	MPMX19_05244	0.25	-0.3
773,803	+	MPMX19_05244	0.25	-2.9
773,803	+	MPMX19_05244	0.25	-1.0
773,803	+	MPMX19_05244	0.25	-0.5
773,803	+	MPMX19_05244	0.25	-0.8
773,803	+	MPMX19_05244	0.25	+0.3
773,803	+	MPMX19_05244	0.25	+0.6
773,803	+	MPMX19_05244	0.25	-0.3
773,803	+	MPMX19_05244	0.25	+0.2
773,803	+	MPMX19_05244	0.25	-0.0
773,803	+	MPMX19_05244	0.25	-1.1
773,803	+	MPMX19_05244	0.25	-1.3
773,803	+	MPMX19_05244	0.25	-0.4
773,803	+	MPMX19_05244	0.25	+0.1
773,803	+	MPMX19_05244	0.25	-0.2
773,803	+	MPMX19_05244	0.25	-0.4
773,803	+	MPMX19_05244	0.25	-1.2
773,803	+	MPMX19_05244	0.25	+0.3
773,803	+	MPMX19_05244	0.25	+0.1
773,803	+	MPMX19_05244	0.25	-0.4
773,803	+	MPMX19_05244	0.25	-0.0
773,803	+	MPMX19_05244	0.25	-0.8
773,803	+	MPMX19_05244	0.25	-1.5
773,803	+	MPMX19_05244	0.25	+0.5
773,803	+	MPMX19_05244	0.25	+0.4
773,803	+	MPMX19_05244	0.25	+0.9
773,803	+	MPMX19_05244	0.25	+0.3
773,804	-	MPMX19_05244	0.25	+0.4
773,804	-	MPMX19_05244	0.25	-0.4
773,804	-	MPMX19_05244	0.25	-0.9
773,804	-	MPMX19_05244	0.25	-0.5
773,804	-	MPMX19_05244	0.25	-1.3
773,804	-	MPMX19_05244	0.25	+0.9
773,804	-	MPMX19_05244	0.25	-0.2
773,804	-	MPMX19_05244	0.25	-0.3
773,804	-	MPMX19_05244	0.25	-1.8
773,804	-	MPMX19_05244	0.25	-0.5
773,804	-	MPMX19_05244	0.25	+0.7
773,804	-	MPMX19_05244	0.25	-0.3
773,804	-	MPMX19_05244	0.25	+0.8
773,804	-	MPMX19_05244	0.25	-1.3
773,804	-	MPMX19_05244	0.25	-0.5
773,878	+	MPMX19_05244	0.32	-0.6
773,878	+	MPMX19_05244	0.32	+0.7
773,879	-	MPMX19_05244	0.32	+0.3
773,879	-	MPMX19_05244	0.32	-2.0
773,879	-	MPMX19_05244	0.32	+0.9
774,001	+	MPMX19_05244	0.44	+0.4
774,001	+	MPMX19_05244	0.44	-0.3
774,002	-	MPMX19_05244	0.44	-0.5
774,088	+	MPMX19_05244	0.52	+0.2
774,088	+	MPMX19_05244	0.52	+0.5
774,088	+	MPMX19_05244	0.52	+0.9
774,088	+	MPMX19_05244	0.52	+0.8
774,088	+	MPMX19_05244	0.52	+1.1
774,088	+	MPMX19_05244	0.52	+0.2
774,088	+	MPMX19_05244	0.52	+1.7
774,088	+	MPMX19_05244	0.52	+0.8
774,088	+	MPMX19_05244	0.52	+0.2
774,089	-	MPMX19_05244	0.52	-0.3
774,089	-	MPMX19_05244	0.52	-0.1
774,089	-	MPMX19_05244	0.52	+0.7
774,089	-	MPMX19_05244	0.52	-0.8
774,688	+			+0.1
774,688	+			+1.1
774,688	+			+0.7
774,688	+			-0.0
774,688	+			+1.0
774,688	+			-0.3
774,688	+			-0.4
774,688	+			-1.1
774,688	+			-0.6
774,689	-			+0.4
774,689	-			+1.1
774,689	-			-0.3
774,689	-			-0.0
774,689	-			-0.5
774,689	-			-1.5
774,689	-			+1.1
774,689	-			+1.9
774,689	-			-1.5
774,689	-			-2.2
774,689	-			+1.6
774,689	-			-1.0
774,690	+			-0.5
774,690	+			-0.0
774,690	+			-0.2
774,690	+			+0.1
774,690	+			-0.4
774,690	+			-0.8
774,690	+			-0.9
774,690	+			+0.1
774,690	+			-1.2
774,691	-			-0.1
774,691	-			+1.2
774,691	-			+0.4
774,691	-			-2.0
774,691	-			-0.3
774,691	-			+0.0
774,691	-			+0.1
774,691	-			-0.1
774,710	+			+0.7
774,711	-			+0.2
774,767	+			-0.3
774,767	+			+0.2
774,767	+			-0.4
774,767	+			-1.5
774,767	+			-1.7
774,767	+			-0.3
774,767	+			+0.5
774,767	+			+0.5
774,767	+			-1.5
774,767	+			+0.6
774,768	-			-1.0
774,768	-			-0.0
774,768	-			+0.3
774,768	-			+0.7
774,768	-			+0.1
774,842	+			-0.4
774,842	+			+0.3
774,843	-			-2.2
774,866	+	MPMX19_05245	0.10	+0.7
774,866	+	MPMX19_05245	0.10	+0.3
774,866	+	MPMX19_05245	0.10	-1.3
774,866	+	MPMX19_05245	0.10	-2.2
774,866	+	MPMX19_05245	0.10	-0.3
774,866	+	MPMX19_05245	0.10	-0.1
774,866	+	MPMX19_05245	0.10	-0.9
774,866	+	MPMX19_05245	0.10	+0.5
774,866	+	MPMX19_05245	0.10	-0.5
774,866	+	MPMX19_05245	0.10	+0.4
774,866	+	MPMX19_05245	0.10	+0.9
774,866	+	MPMX19_05245	0.10	-1.3
774,866	+	MPMX19_05245	0.10	-2.5
774,866	+	MPMX19_05245	0.10	+0.3
774,866	+	MPMX19_05245	0.10	+2.2
774,866	+	MPMX19_05245	0.10	-0.6
774,867	-	MPMX19_05245	0.10	-0.4
774,867	-	MPMX19_05245	0.10	+0.7
774,867	-	MPMX19_05245	0.10	-0.9
774,867	-	MPMX19_05245	0.10	+0.2
774,867	-	MPMX19_05245	0.10	-1.5
774,867	-	MPMX19_05245	0.10	+0.7
774,867	-	MPMX19_05245	0.10	-0.1
774,867	-	MPMX19_05245	0.10	-0.5
774,867	-	MPMX19_05245	0.10	-1.2
774,887	+	MPMX19_05245	0.12	-0.1
774,887	+	MPMX19_05245	0.12	+0.7
774,964	+	MPMX19_05245	0.17	-0.4
774,965	+	MPMX19_05245	0.17	+1.1
774,965	+	MPMX19_05245	0.17	-0.5
774,965	+	MPMX19_05245	0.17	-0.7
774,965	+	MPMX19_05245	0.17	+0.2
774,965	+	MPMX19_05245	0.17	+0.1
774,966	-	MPMX19_05245	0.17	+0.4
774,966	-	MPMX19_05245	0.17	+0.5
774,966	-	MPMX19_05245	0.17	+0.3
774,966	-	MPMX19_05245	0.17	-2.2
774,966	-	MPMX19_05245	0.17	-0.4
774,966	-	MPMX19_05245	0.17	-0.3
774,966	-	MPMX19_05245	0.17	-0.4
774,966	-	MPMX19_05245	0.17	-0.4
774,966	-	MPMX19_05245	0.17	+0.8
774,966	-	MPMX19_05245	0.17	+0.1
774,966	-	MPMX19_05245	0.17	-0.3
775,331	+	MPMX19_05245	0.41	+1.7
775,332	-	MPMX19_05245	0.41	-1.6
775,332	-	MPMX19_05245	0.41	-1.3
775,332	-	MPMX19_05245	0.41	-1.1
775,460	-	MPMX19_05245	0.50	+0.4
775,472	+	MPMX19_05245	0.50	+1.2
775,473	-	MPMX19_05245	0.50	-0.7
775,473	-	MPMX19_05245	0.50	-1.3
775,517	+	MPMX19_05245	0.53	-1.0
775,517	+	MPMX19_05245	0.53	+0.3
775,517	+	MPMX19_05245	0.53	+0.2
775,517	+	MPMX19_05245	0.53	-0.8
775,517	+	MPMX19_05245	0.53	-0.9
775,517	+	MPMX19_05245	0.53	-0.3
775,517	+	MPMX19_05245	0.53	+0.3
775,517	+	MPMX19_05245	0.53	-0.7
775,517	+	MPMX19_05245	0.53	+1.7
775,517	+	MPMX19_05245	0.53	+0.7
775,517	+	MPMX19_05245	0.53	-0.9
775,517	+	MPMX19_05245	0.53	+0.4
775,517	+	MPMX19_05245	0.53	+0.3
775,518	-	MPMX19_05245	0.53	-0.2
775,518	-	MPMX19_05245	0.53	+0.7
775,518	-	MPMX19_05245	0.53	-0.9
775,518	-	MPMX19_05245	0.53	+0.5
775,518	-	MPMX19_05245	0.53	-1.1
775,518	-	MPMX19_05245	0.53	-0.5
775,518	-	MPMX19_05245	0.53	+1.0
775,518	-	MPMX19_05245	0.53	+0.1

Or see this region's nucleotide sequence