Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05055 and MPMX19_05056 are separated by 154 nucleotides MPMX19_05056 and MPMX19_05057 are separated by 122 nucleotides MPMX19_05057 and MPMX19_05058 are separated by 184 nucleotides MPMX19_05058 and MPMX19_05059 overlap by 10 nucleotides
MPMX19_05055: MPMX19_05055 - Phosphoserine aminotransferase, at 540,887 to 542,074
_05055
MPMX19_05056: MPMX19_05056 - hypothetical protein, at 542,229 to 542,696
_05056
MPMX19_05057: MPMX19_05057 - hypothetical protein, at 542,819 to 543,184
_05057
MPMX19_05058: MPMX19_05058 - hypothetical protein, at 543,369 to 543,596
_05058
MPMX19_05059: MPMX19_05059 - hypothetical protein, at 543,587 to 544,339
_05059
Position (kb) 542
543 Strain fitness (log2 ratio) -2
-1
0
1 at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.181 kb on + strand at 542.181 kb on + strand at 542.230 kb on + strand at 542.231 kb on - strand at 542.231 kb on - strand at 542.231 kb on - strand at 542.260 kb on + strand at 542.260 kb on + strand at 542.261 kb on - strand at 542.261 kb on - strand at 542.261 kb on - strand at 542.366 kb on - strand, within MPMX19_05056 at 542.476 kb on + strand, within MPMX19_05056 at 542.476 kb on - strand, within MPMX19_05056 at 542.477 kb on - strand, within MPMX19_05056 at 542.511 kb on - strand, within MPMX19_05056 at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.738 kb on - strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.871 kb on + strand, within MPMX19_05057 at 542.872 kb on - strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.923 kb on - strand, within MPMX19_05057 at 542.923 kb on - strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.964 kb on + strand, within MPMX19_05057 at 542.964 kb on + strand, within MPMX19_05057 at 542.964 kb on + strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.967 kb on + strand, within MPMX19_05057 at 542.968 kb on - strand, within MPMX19_05057 at 542.968 kb on - strand, within MPMX19_05057 at 543.166 kb on + strand at 543.166 kb on + strand at 543.167 kb on - strand at 543.167 kb on - strand at 543.210 kb on + strand at 543.210 kb on + strand at 543.211 kb on - strand at 543.211 kb on - strand at 543.211 kb on - strand at 543.285 kb on + strand at 543.285 kb on + strand at 543.285 kb on + strand at 543.286 kb on - strand at 543.297 kb on + strand at 543.297 kb on + strand at 543.297 kb on + strand at 543.298 kb on - strand at 543.351 kb on + strand at 543.351 kb on + strand at 543.352 kb on - strand at 543.352 kb on - strand at 543.356 kb on + strand at 543.356 kb on + strand at 543.356 kb on + strand at 543.356 kb on + strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.357 kb on - strand at 543.373 kb on + strand at 543.373 kb on + strand at 543.373 kb on + strand at 543.374 kb on - strand at 543.374 kb on - strand at 543.374 kb on - strand at 543.561 kb on + strand, within MPMX19_05058 at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.594 kb on + strand at 543.595 kb on - strand at 543.595 kb on - strand at 543.595 kb on - strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.648 kb on + strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand at 543.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 542,138 - +1.5 542,138 - -0.1 542,138 - -0.7 542,138 - +0.9 542,138 - +0.7 542,138 - -1.3 542,138 - +0.9 542,181 + +0.5 542,181 + -1.6 542,230 + -1.6 542,231 - -0.7 542,231 - -1.0 542,231 - -0.6 542,260 + -0.9 542,260 + +0.6 542,261 - -1.9 542,261 - -0.5 542,261 - -0.6 542,366 - MPMX19_05056 0.29 -0.6 542,476 + MPMX19_05056 0.53 -0.8 542,476 - MPMX19_05056 0.53 +0.4 542,477 - MPMX19_05056 0.53 -1.3 542,511 - MPMX19_05056 0.60 -1.0 542,684 + -1.6 542,684 + -1.4 542,684 + -0.2 542,684 + -1.0 542,684 + -0.9 542,684 + -0.5 542,684 + +0.1 542,684 + +0.2 542,684 + +0.1 542,685 - +0.1 542,685 - +1.1 542,685 - -0.7 542,685 - -1.5 542,685 - +0.1 542,685 - -0.2 542,685 - +0.2 542,685 - -1.7 542,685 - -0.7 542,685 - -1.2 542,685 - -0.3 542,685 - -1.1 542,685 - -0.1 542,685 - +1.2 542,738 - -1.9 542,756 + -0.2 542,756 + -2.1 542,756 + +0.2 542,756 + -0.3 542,756 + -0.8 542,756 + -1.5 542,756 + +0.7 542,757 - -0.0 542,757 - -0.2 542,757 - -1.3 542,757 - -0.3 542,757 - +0.5 542,871 + MPMX19_05057 0.14 -1.9 542,872 - MPMX19_05057 0.14 -1.0 542,892 + MPMX19_05057 0.20 -0.1 542,892 + MPMX19_05057 0.20 -1.8 542,892 + MPMX19_05057 0.20 +0.9 542,892 + MPMX19_05057 0.20 -1.5 542,892 + MPMX19_05057 0.20 -0.9 542,892 + MPMX19_05057 0.20 -2.3 542,892 + MPMX19_05057 0.20 -0.1 542,892 + MPMX19_05057 0.20 -0.4 542,892 + MPMX19_05057 0.20 -1.4 542,892 + MPMX19_05057 0.20 -0.4 542,892 + MPMX19_05057 0.20 -1.7 542,892 + MPMX19_05057 0.20 -0.9 542,892 + MPMX19_05057 0.20 +0.3 542,892 + MPMX19_05057 0.20 -0.9 542,892 + MPMX19_05057 0.20 -0.6 542,892 + MPMX19_05057 0.20 -0.1 542,892 + MPMX19_05057 0.20 -1.1 542,892 + MPMX19_05057 0.20 -0.1 542,893 - MPMX19_05057 0.20 -0.3 542,893 - MPMX19_05057 0.20 +0.7 542,893 - MPMX19_05057 0.20 -0.9 542,893 - MPMX19_05057 0.20 +0.9 542,893 - MPMX19_05057 0.20 -0.1 542,893 - MPMX19_05057 0.20 -0.1 542,893 - MPMX19_05057 0.20 -0.0 542,893 - MPMX19_05057 0.20 +1.1 542,893 - MPMX19_05057 0.20 -0.7 542,893 - MPMX19_05057 0.20 +0.6 542,893 - MPMX19_05057 0.20 -1.6 542,893 - MPMX19_05057 0.20 +0.1 542,893 - MPMX19_05057 0.20 -0.6 542,893 - MPMX19_05057 0.20 -1.4 542,893 - MPMX19_05057 0.20 +1.6 542,893 - MPMX19_05057 0.20 -0.9 542,923 - MPMX19_05057 0.28 -1.3 542,923 - MPMX19_05057 0.28 -1.2 542,943 + MPMX19_05057 0.34 +0.2 542,943 + MPMX19_05057 0.34 +0.1 542,943 + MPMX19_05057 0.34 -1.3 542,943 + MPMX19_05057 0.34 -0.1 542,943 + MPMX19_05057 0.34 +0.3 542,943 + MPMX19_05057 0.34 -1.1 542,943 + MPMX19_05057 0.34 -0.9 542,943 + MPMX19_05057 0.34 -0.6 542,943 + MPMX19_05057 0.34 -0.1 542,943 + MPMX19_05057 0.34 -0.6 542,943 + MPMX19_05057 0.34 -0.6 542,944 - MPMX19_05057 0.34 +0.4 542,944 - MPMX19_05057 0.34 -1.4 542,944 - MPMX19_05057 0.34 -0.2 542,944 - MPMX19_05057 0.34 -1.2 542,944 - MPMX19_05057 0.34 -2.1 542,944 - MPMX19_05057 0.34 -0.4 542,964 + MPMX19_05057 0.40 -0.6 542,964 + MPMX19_05057 0.40 -0.3 542,964 + MPMX19_05057 0.40 -0.2 542,965 - MPMX19_05057 0.40 +0.9 542,965 - MPMX19_05057 0.40 +1.3 542,965 - MPMX19_05057 0.40 -1.6 542,965 - MPMX19_05057 0.40 -1.9 542,965 - MPMX19_05057 0.40 -0.2 542,965 - MPMX19_05057 0.40 -1.7 542,967 + MPMX19_05057 0.40 -0.9 542,968 - MPMX19_05057 0.41 +0.4 542,968 - MPMX19_05057 0.41 -0.4 543,166 + +0.4 543,166 + +0.7 543,167 - -0.4 543,167 - -0.1 543,210 + -1.3 543,210 + -1.7 543,211 - -0.7 543,211 - -0.3 543,211 - -0.7 543,285 + +0.1 543,285 + +0.1 543,285 + -0.9 543,286 - -0.7 543,297 + +0.4 543,297 + +1.2 543,297 + -0.4 543,298 - +1.4 543,351 + -1.3 543,351 + -0.0 543,352 - +0.7 543,352 - -0.9 543,356 + -0.4 543,356 + -1.0 543,356 + -0.1 543,356 + -0.9 543,357 - +1.2 543,357 - +1.0 543,357 - -1.3 543,357 - -1.8 543,357 - -2.3 543,357 - -0.6 543,357 - -0.7 543,373 + -0.6 543,373 + -0.4 543,373 + -0.6 543,374 - -0.4 543,374 - +0.3 543,374 - -0.2 543,561 + MPMX19_05058 0.84 -0.3 543,594 + -0.3 543,594 + -1.2 543,594 + -2.3 543,594 + -0.0 543,594 + -0.5 543,594 + +0.9 543,594 + -0.7 543,594 + -0.9 543,595 - -1.2 543,595 - -1.0 543,595 - -0.3 543,648 + -0.1 543,648 + -0.0 543,648 + +0.4 543,648 + -1.4 543,648 + +1.2 543,648 + +0.4 543,648 + +1.1 543,648 + -0.4 543,648 + -0.3 543,648 + -0.4 543,648 + +0.3 543,648 + +0.1 543,648 + +0.1 543,648 + -1.7 543,648 + -0.2 543,648 + -0.9 543,648 + +1.0 543,648 + -2.3 543,648 + -2.2 543,649 - -1.4 543,649 - +0.1 543,649 - +0.3 543,649 - -1.4 543,649 - -1.0 543,649 - -1.7 543,649 - +0.1 543,649 - +1.5 543,649 - -0.6 543,649 - +1.0 543,649 - +0.6 543,649 - -1.3 543,649 - -0.6 543,649 - +0.3 543,649 - +0.7 543,649 - -1.0 543,649 - -1.0 543,649 - +1.2 543,649 - +0.7 543,649 - -1.3 543,649 - +1.7
Or see this region's nucleotide sequence