Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04936 and MPMX19_04937 are separated by 51 nucleotides MPMX19_04937 and MPMX19_04938 overlap by 4 nucleotides
MPMX19_04936: MPMX19_04936 - Urocanate hydratase, at 398,132 to 399,814
_04936
MPMX19_04937: MPMX19_04937 - Mannosyl-D-glycerate transport/metabolism system repressor MngR, at 399,866 to 400,594
_04937
MPMX19_04938: MPMX19_04938 - Imidazolonepropionase, at 400,591 to 401,844
_04938
Position (kb) 399
400
401 Strain fitness (log2 ratio) -2
-1
0
1
2 at 398.982 kb on + strand, within MPMX19_04936 at 398.982 kb on + strand, within MPMX19_04936 at 398.982 kb on + strand, within MPMX19_04936 at 398.983 kb on - strand, within MPMX19_04936 at 399.187 kb on - strand, within MPMX19_04936 at 399.187 kb on - strand, within MPMX19_04936 at 399.336 kb on + strand, within MPMX19_04936 at 399.336 kb on + strand, within MPMX19_04936 at 399.336 kb on + strand, within MPMX19_04936 at 399.336 kb on + strand, within MPMX19_04936 at 399.336 kb on + strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.337 kb on - strand, within MPMX19_04936 at 399.369 kb on + strand, within MPMX19_04936 at 399.369 kb on + strand, within MPMX19_04936 at 399.369 kb on + strand, within MPMX19_04936 at 399.369 kb on + strand, within MPMX19_04936 at 399.369 kb on + strand, within MPMX19_04936 at 399.369 kb on + strand, within MPMX19_04936 at 399.369 kb on + strand, within MPMX19_04936 at 399.369 kb on + strand, within MPMX19_04936 at 399.370 kb on - strand, within MPMX19_04936 at 399.370 kb on - strand, within MPMX19_04936 at 399.370 kb on - strand, within MPMX19_04936 at 399.370 kb on - strand, within MPMX19_04936 at 399.370 kb on - strand, within MPMX19_04936 at 399.402 kb on + strand, within MPMX19_04936 at 399.402 kb on + strand, within MPMX19_04936 at 399.402 kb on + strand, within MPMX19_04936 at 399.403 kb on - strand, within MPMX19_04936 at 399.403 kb on - strand, within MPMX19_04936 at 399.403 kb on - strand, within MPMX19_04936 at 399.403 kb on - strand, within MPMX19_04936 at 399.432 kb on + strand, within MPMX19_04936 at 399.432 kb on + strand, within MPMX19_04936 at 399.432 kb on + strand, within MPMX19_04936 at 399.432 kb on + strand, within MPMX19_04936 at 399.432 kb on + strand, within MPMX19_04936 at 399.432 kb on + strand, within MPMX19_04936 at 399.432 kb on + strand, within MPMX19_04936 at 399.432 kb on + strand, within MPMX19_04936 at 399.433 kb on - strand, within MPMX19_04936 at 399.433 kb on - strand, within MPMX19_04936 at 399.433 kb on - strand, within MPMX19_04936 at 399.433 kb on - strand, within MPMX19_04936 at 399.433 kb on - strand, within MPMX19_04936 at 399.663 kb on + strand at 399.664 kb on - strand at 399.664 kb on - strand at 400.086 kb on + strand, within MPMX19_04937 at 400.086 kb on + strand, within MPMX19_04937 at 400.086 kb on + strand, within MPMX19_04937 at 400.086 kb on + strand, within MPMX19_04937 at 400.087 kb on - strand, within MPMX19_04937 at 400.087 kb on - strand, within MPMX19_04937 at 400.125 kb on + strand, within MPMX19_04937 at 400.125 kb on + strand, within MPMX19_04937 at 400.125 kb on + strand, within MPMX19_04937 at 400.126 kb on - strand, within MPMX19_04937 at 400.431 kb on - strand, within MPMX19_04937 at 400.431 kb on - strand, within MPMX19_04937 at 400.561 kb on - strand at 400.561 kb on - strand at 400.667 kb on - strand at 400.673 kb on + strand at 400.673 kb on + strand at 400.673 kb on + strand at 400.674 kb on - strand at 400.958 kb on + strand, within MPMX19_04938 at 400.958 kb on + strand, within MPMX19_04938 at 400.958 kb on + strand, within MPMX19_04938 at 400.958 kb on + strand, within MPMX19_04938 at 400.958 kb on + strand, within MPMX19_04938 at 400.958 kb on + strand, within MPMX19_04938 at 400.958 kb on + strand, within MPMX19_04938 at 400.958 kb on + strand, within MPMX19_04938 at 400.958 kb on + strand, within MPMX19_04938 at 400.959 kb on - strand, within MPMX19_04938 at 400.959 kb on - strand, within MPMX19_04938 at 401.264 kb on + strand, within MPMX19_04938 at 401.265 kb on - strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.315 kb on + strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.316 kb on - strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.552 kb on + strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938 at 401.553 kb on - strand, within MPMX19_04938
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 398,982 + MPMX19_04936 0.51 -0.4 398,982 + MPMX19_04936 0.51 -0.4 398,982 + MPMX19_04936 0.51 -0.8 398,983 - MPMX19_04936 0.51 -1.4 399,187 - MPMX19_04936 0.63 -0.5 399,187 - MPMX19_04936 0.63 -0.6 399,336 + MPMX19_04936 0.72 -1.3 399,336 + MPMX19_04936 0.72 +0.5 399,336 + MPMX19_04936 0.72 -0.4 399,336 + MPMX19_04936 0.72 -0.4 399,336 + MPMX19_04936 0.72 -0.5 399,337 - MPMX19_04936 0.72 +1.2 399,337 - MPMX19_04936 0.72 +1.4 399,337 - MPMX19_04936 0.72 -0.7 399,337 - MPMX19_04936 0.72 -2.4 399,337 - MPMX19_04936 0.72 -1.4 399,337 - MPMX19_04936 0.72 -0.2 399,337 - MPMX19_04936 0.72 -1.3 399,337 - MPMX19_04936 0.72 -0.6 399,337 - MPMX19_04936 0.72 +0.1 399,337 - MPMX19_04936 0.72 -0.2 399,337 - MPMX19_04936 0.72 -0.2 399,337 - MPMX19_04936 0.72 +0.2 399,337 - MPMX19_04936 0.72 -0.2 399,369 + MPMX19_04936 0.73 -0.9 399,369 + MPMX19_04936 0.73 -2.2 399,369 + MPMX19_04936 0.73 -0.9 399,369 + MPMX19_04936 0.73 +0.2 399,369 + MPMX19_04936 0.73 -0.2 399,369 + MPMX19_04936 0.73 -0.8 399,369 + MPMX19_04936 0.73 -0.7 399,369 + MPMX19_04936 0.73 +0.8 399,370 - MPMX19_04936 0.74 -0.7 399,370 - MPMX19_04936 0.74 -0.6 399,370 - MPMX19_04936 0.74 -0.4 399,370 - MPMX19_04936 0.74 +0.9 399,370 - MPMX19_04936 0.74 -0.4 399,402 + MPMX19_04936 0.75 -0.1 399,402 + MPMX19_04936 0.75 +1.4 399,402 + MPMX19_04936 0.75 +0.4 399,403 - MPMX19_04936 0.76 +0.3 399,403 - MPMX19_04936 0.76 -0.3 399,403 - MPMX19_04936 0.76 +0.4 399,403 - MPMX19_04936 0.76 -1.6 399,432 + MPMX19_04936 0.77 -0.6 399,432 + MPMX19_04936 0.77 -1.4 399,432 + MPMX19_04936 0.77 -1.6 399,432 + MPMX19_04936 0.77 -1.7 399,432 + MPMX19_04936 0.77 -0.8 399,432 + MPMX19_04936 0.77 +0.4 399,432 + MPMX19_04936 0.77 -0.6 399,432 + MPMX19_04936 0.77 -2.5 399,433 - MPMX19_04936 0.77 -0.6 399,433 - MPMX19_04936 0.77 -0.7 399,433 - MPMX19_04936 0.77 +0.6 399,433 - MPMX19_04936 0.77 -0.2 399,433 - MPMX19_04936 0.77 +2.3 399,663 + +1.2 399,664 - -0.2 399,664 - +1.3 400,086 + MPMX19_04937 0.30 -1.2 400,086 + MPMX19_04937 0.30 +0.5 400,086 + MPMX19_04937 0.30 -0.0 400,086 + MPMX19_04937 0.30 -0.8 400,087 - MPMX19_04937 0.30 -0.0 400,087 - MPMX19_04937 0.30 -0.4 400,125 + MPMX19_04937 0.36 -1.9 400,125 + MPMX19_04937 0.36 -1.1 400,125 + MPMX19_04937 0.36 -1.1 400,126 - MPMX19_04937 0.36 +0.2 400,431 - MPMX19_04937 0.78 -0.4 400,431 - MPMX19_04937 0.78 -0.9 400,561 - -1.5 400,561 - -0.6 400,667 - +0.7 400,673 + -1.1 400,673 + +1.2 400,673 + -0.0 400,674 - -1.1 400,958 + MPMX19_04938 0.29 -1.3 400,958 + MPMX19_04938 0.29 -0.2 400,958 + MPMX19_04938 0.29 +0.2 400,958 + MPMX19_04938 0.29 -0.2 400,958 + MPMX19_04938 0.29 -1.1 400,958 + MPMX19_04938 0.29 -1.1 400,958 + MPMX19_04938 0.29 -0.6 400,958 + MPMX19_04938 0.29 +1.2 400,958 + MPMX19_04938 0.29 -0.3 400,959 - MPMX19_04938 0.29 -1.4 400,959 - MPMX19_04938 0.29 +1.0 401,264 + MPMX19_04938 0.54 +0.2 401,265 - MPMX19_04938 0.54 -1.0 401,315 + MPMX19_04938 0.58 +1.2 401,315 + MPMX19_04938 0.58 +1.3 401,315 + MPMX19_04938 0.58 -1.6 401,315 + MPMX19_04938 0.58 -0.5 401,315 + MPMX19_04938 0.58 -1.8 401,315 + MPMX19_04938 0.58 -1.6 401,315 + MPMX19_04938 0.58 +0.5 401,315 + MPMX19_04938 0.58 +0.3 401,315 + MPMX19_04938 0.58 -1.4 401,315 + MPMX19_04938 0.58 +1.8 401,315 + MPMX19_04938 0.58 -0.6 401,316 - MPMX19_04938 0.58 +0.6 401,316 - MPMX19_04938 0.58 -0.8 401,316 - MPMX19_04938 0.58 -1.9 401,316 - MPMX19_04938 0.58 -0.4 401,316 - MPMX19_04938 0.58 -0.4 401,316 - MPMX19_04938 0.58 -0.6 401,316 - MPMX19_04938 0.58 -0.6 401,316 - MPMX19_04938 0.58 +0.1 401,316 - MPMX19_04938 0.58 +0.0 401,316 - MPMX19_04938 0.58 +0.8 401,316 - MPMX19_04938 0.58 -0.1 401,316 - MPMX19_04938 0.58 -1.8 401,552 + MPMX19_04938 0.77 -0.1 401,552 + MPMX19_04938 0.77 -1.4 401,552 + MPMX19_04938 0.77 -1.0 401,552 + MPMX19_04938 0.77 +0.4 401,552 + MPMX19_04938 0.77 -2.6 401,552 + MPMX19_04938 0.77 +0.2 401,552 + MPMX19_04938 0.77 +0.2 401,552 + MPMX19_04938 0.77 +0.9 401,552 + MPMX19_04938 0.77 -0.6 401,552 + MPMX19_04938 0.77 -1.1 401,552 + MPMX19_04938 0.77 -0.8 401,552 + MPMX19_04938 0.77 +0.5 401,552 + MPMX19_04938 0.77 -0.2 401,552 + MPMX19_04938 0.77 +0.6 401,552 + MPMX19_04938 0.77 -1.2 401,553 - MPMX19_04938 0.77 +0.6 401,553 - MPMX19_04938 0.77 -0.2 401,553 - MPMX19_04938 0.77 -0.3 401,553 - MPMX19_04938 0.77 +0.3 401,553 - MPMX19_04938 0.77 -1.3 401,553 - MPMX19_04938 0.77 -0.2 401,553 - MPMX19_04938 0.77 -0.7 401,553 - MPMX19_04938 0.77 -1.1 401,553 - MPMX19_04938 0.77 -0.9 401,553 - MPMX19_04938 0.77 +0.2 401,553 - MPMX19_04938 0.77 +0.0 401,553 - MPMX19_04938 0.77 -0.3
Or see this region's nucleotide sequence