Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04919 and MPMX19_04920 are separated by 34 nucleotides MPMX19_04920 and MPMX19_04921 are separated by 218 nucleotides MPMX19_04921 and MPMX19_04922 are separated by 45 nucleotides
MPMX19_04919: MPMX19_04919 - 5-aminovalerate aminotransferase DavT, at 375,407 to 376,696
_04919
MPMX19_04920: MPMX19_04920 - Succinate-semialdehyde dehydrogenase [NADP(+)] GabD, at 376,731 to 378,191
_04920
MPMX19_04921: MPMX19_04921 - HTH-type transcriptional regulator PuuR, at 378,410 to 378,976
_04921
MPMX19_04922: MPMX19_04922 - Putative 2-aminoethylphosphonate transport system permease protein PhnV, at 379,022 to 379,852
_04922
Position (kb) 376
377
378
379 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 375.804 kb on + strand, within MPMX19_04919 at 375.804 kb on + strand, within MPMX19_04919 at 375.804 kb on + strand, within MPMX19_04919 at 375.804 kb on + strand, within MPMX19_04919 at 375.804 kb on + strand, within MPMX19_04919 at 375.804 kb on + strand, within MPMX19_04919 at 375.804 kb on + strand, within MPMX19_04919 at 375.804 kb on + strand, within MPMX19_04919 at 375.804 kb on + strand, within MPMX19_04919 at 375.804 kb on + strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 375.805 kb on - strand, within MPMX19_04919 at 376.233 kb on + strand, within MPMX19_04919 at 376.233 kb on + strand, within MPMX19_04919 at 376.233 kb on + strand, within MPMX19_04919 at 376.233 kb on + strand, within MPMX19_04919 at 376.233 kb on + strand, within MPMX19_04919 at 376.234 kb on - strand, within MPMX19_04919 at 376.234 kb on - strand, within MPMX19_04919 at 376.234 kb on - strand, within MPMX19_04919 at 376.234 kb on - strand, within MPMX19_04919 at 376.449 kb on + strand, within MPMX19_04919 at 376.450 kb on - strand, within MPMX19_04919 at 376.620 kb on + strand at 376.620 kb on + strand at 376.620 kb on + strand at 376.620 kb on + strand at 376.620 kb on + strand at 376.620 kb on + strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.621 kb on - strand at 376.756 kb on + strand at 376.756 kb on + strand at 376.756 kb on + strand at 376.757 kb on - strand at 376.757 kb on - strand at 376.757 kb on - strand at 376.787 kb on - strand at 376.787 kb on - strand at 376.787 kb on - strand at 376.787 kb on - strand at 376.883 kb on - strand, within MPMX19_04920 at 376.883 kb on - strand, within MPMX19_04920 at 376.883 kb on - strand, within MPMX19_04920 at 376.883 kb on - strand, within MPMX19_04920 at 376.883 kb on - strand, within MPMX19_04920 at 376.883 kb on - strand, within MPMX19_04920 at 376.883 kb on - strand, within MPMX19_04920 at 376.930 kb on + strand, within MPMX19_04920 at 376.930 kb on + strand, within MPMX19_04920 at 376.930 kb on + strand, within MPMX19_04920 at 376.931 kb on - strand, within MPMX19_04920 at 376.931 kb on - strand, within MPMX19_04920 at 376.931 kb on - strand, within MPMX19_04920 at 376.931 kb on - strand, within MPMX19_04920 at 376.936 kb on + strand, within MPMX19_04920 at 376.937 kb on - strand, within MPMX19_04920 at 376.937 kb on - strand, within MPMX19_04920 at 376.937 kb on - strand, within MPMX19_04920 at 376.937 kb on - strand, within MPMX19_04920 at 377.281 kb on + strand, within MPMX19_04920 at 377.281 kb on + strand, within MPMX19_04920 at 377.281 kb on + strand, within MPMX19_04920 at 377.281 kb on + strand, within MPMX19_04920 at 377.282 kb on - strand, within MPMX19_04920 at 377.282 kb on - strand, within MPMX19_04920 at 377.282 kb on - strand, within MPMX19_04920 at 377.282 kb on - strand, within MPMX19_04920 at 377.282 kb on - strand, within MPMX19_04920 at 377.282 kb on - strand, within MPMX19_04920 at 377.282 kb on - strand, within MPMX19_04920 at 377.282 kb on - strand, within MPMX19_04920 at 377.282 kb on - strand, within MPMX19_04920 at 377.341 kb on + strand, within MPMX19_04920 at 377.342 kb on - strand, within MPMX19_04920 at 377.342 kb on - strand, within MPMX19_04920 at 377.809 kb on + strand, within MPMX19_04920 at 377.809 kb on + strand, within MPMX19_04920 at 377.809 kb on + strand, within MPMX19_04920 at 377.857 kb on + strand, within MPMX19_04920 at 377.857 kb on + strand, within MPMX19_04920 at 377.857 kb on + strand, within MPMX19_04920 at 377.858 kb on - strand, within MPMX19_04920 at 377.858 kb on - strand, within MPMX19_04920 at 377.950 kb on + strand, within MPMX19_04920 at 377.950 kb on + strand, within MPMX19_04920 at 378.148 kb on + strand at 378.148 kb on + strand at 378.148 kb on + strand at 378.149 kb on - strand at 378.149 kb on - strand at 378.149 kb on - strand at 378.218 kb on - strand at 378.218 kb on - strand at 378.304 kb on - strand at 378.335 kb on + strand at 378.335 kb on + strand at 378.335 kb on + strand at 378.336 kb on - strand at 378.336 kb on - strand at 378.336 kb on - strand at 378.336 kb on - strand at 378.345 kb on + strand at 378.345 kb on + strand at 378.383 kb on + strand at 378.384 kb on - strand at 378.756 kb on - strand, within MPMX19_04921 at 378.756 kb on - strand, within MPMX19_04921 at 378.884 kb on + strand, within MPMX19_04921 at 378.884 kb on + strand, within MPMX19_04921 at 378.884 kb on + strand, within MPMX19_04921 at 378.884 kb on + strand, within MPMX19_04921 at 378.884 kb on + strand, within MPMX19_04921 at 378.885 kb on - strand, within MPMX19_04921 at 378.968 kb on + strand at 378.968 kb on + strand at 378.968 kb on + strand at 378.968 kb on + strand at 378.969 kb on - strand at 378.969 kb on - strand at 378.969 kb on - strand at 378.996 kb on + strand at 378.996 kb on + strand at 378.996 kb on + strand at 378.997 kb on - strand at 378.997 kb on - strand at 379.024 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 375,804 + MPMX19_04919 0.31 -1.6 375,804 + MPMX19_04919 0.31 -1.3 375,804 + MPMX19_04919 0.31 -0.0 375,804 + MPMX19_04919 0.31 -0.4 375,804 + MPMX19_04919 0.31 +1.8 375,804 + MPMX19_04919 0.31 -0.2 375,804 + MPMX19_04919 0.31 +0.2 375,804 + MPMX19_04919 0.31 -0.6 375,804 + MPMX19_04919 0.31 -0.7 375,804 + MPMX19_04919 0.31 -2.1 375,805 - MPMX19_04919 0.31 -0.4 375,805 - MPMX19_04919 0.31 -1.0 375,805 - MPMX19_04919 0.31 -1.4 375,805 - MPMX19_04919 0.31 +0.8 375,805 - MPMX19_04919 0.31 -0.3 375,805 - MPMX19_04919 0.31 -0.2 375,805 - MPMX19_04919 0.31 -0.2 375,805 - MPMX19_04919 0.31 -1.6 375,805 - MPMX19_04919 0.31 -0.4 375,805 - MPMX19_04919 0.31 +0.4 375,805 - MPMX19_04919 0.31 +0.5 375,805 - MPMX19_04919 0.31 -0.4 375,805 - MPMX19_04919 0.31 -0.4 376,233 + MPMX19_04919 0.64 +0.5 376,233 + MPMX19_04919 0.64 -1.4 376,233 + MPMX19_04919 0.64 +0.9 376,233 + MPMX19_04919 0.64 -1.6 376,233 + MPMX19_04919 0.64 +0.0 376,234 - MPMX19_04919 0.64 +0.5 376,234 - MPMX19_04919 0.64 -0.5 376,234 - MPMX19_04919 0.64 +0.1 376,234 - MPMX19_04919 0.64 -1.1 376,449 + MPMX19_04919 0.81 +0.5 376,450 - MPMX19_04919 0.81 +1.3 376,620 + -0.9 376,620 + -0.6 376,620 + +1.3 376,620 + +0.6 376,620 + -1.6 376,620 + -0.3 376,621 - +0.7 376,621 - -0.8 376,621 - -0.3 376,621 - +0.4 376,621 - -1.6 376,621 - -2.1 376,621 - +1.8 376,621 - -0.2 376,621 - +0.1 376,621 - -0.2 376,621 - +3.0 376,756 + -0.6 376,756 + -1.6 376,756 + -0.9 376,757 - +1.9 376,757 - +0.0 376,757 - -0.5 376,787 - -0.1 376,787 - -0.4 376,787 - +0.2 376,787 - +1.1 376,883 - MPMX19_04920 0.10 +0.3 376,883 - MPMX19_04920 0.10 +0.4 376,883 - MPMX19_04920 0.10 +0.1 376,883 - MPMX19_04920 0.10 -1.8 376,883 - MPMX19_04920 0.10 -1.7 376,883 - MPMX19_04920 0.10 -1.8 376,883 - MPMX19_04920 0.10 -0.1 376,930 + MPMX19_04920 0.14 -0.2 376,930 + MPMX19_04920 0.14 -1.9 376,930 + MPMX19_04920 0.14 -1.4 376,931 - MPMX19_04920 0.14 -1.8 376,931 - MPMX19_04920 0.14 +0.1 376,931 - MPMX19_04920 0.14 +0.2 376,931 - MPMX19_04920 0.14 -0.0 376,936 + MPMX19_04920 0.14 -0.8 376,937 - MPMX19_04920 0.14 +1.5 376,937 - MPMX19_04920 0.14 -0.7 376,937 - MPMX19_04920 0.14 -0.2 376,937 - MPMX19_04920 0.14 -1.1 377,281 + MPMX19_04920 0.38 +0.2 377,281 + MPMX19_04920 0.38 -0.2 377,281 + MPMX19_04920 0.38 -0.6 377,281 + MPMX19_04920 0.38 +0.0 377,282 - MPMX19_04920 0.38 -1.1 377,282 - MPMX19_04920 0.38 -0.1 377,282 - MPMX19_04920 0.38 -2.1 377,282 - MPMX19_04920 0.38 -1.7 377,282 - MPMX19_04920 0.38 -0.7 377,282 - MPMX19_04920 0.38 -1.4 377,282 - MPMX19_04920 0.38 -0.6 377,282 - MPMX19_04920 0.38 -1.3 377,282 - MPMX19_04920 0.38 +0.6 377,341 + MPMX19_04920 0.42 -1.1 377,342 - MPMX19_04920 0.42 -0.8 377,342 - MPMX19_04920 0.42 +0.2 377,809 + MPMX19_04920 0.74 -1.5 377,809 + MPMX19_04920 0.74 +0.1 377,809 + MPMX19_04920 0.74 -0.8 377,857 + MPMX19_04920 0.77 -0.9 377,857 + MPMX19_04920 0.77 -0.6 377,857 + MPMX19_04920 0.77 -1.1 377,858 - MPMX19_04920 0.77 -0.8 377,858 - MPMX19_04920 0.77 +1.5 377,950 + MPMX19_04920 0.83 +0.2 377,950 + MPMX19_04920 0.83 +0.1 378,148 + +1.2 378,148 + -1.3 378,148 + -0.3 378,149 - -1.3 378,149 - +0.6 378,149 - -0.6 378,218 - -1.0 378,218 - -0.4 378,304 - -1.7 378,335 + +1.2 378,335 + -1.1 378,335 + +0.6 378,336 - -0.2 378,336 - -0.8 378,336 - +0.1 378,336 - +0.6 378,345 + -0.6 378,345 + -0.1 378,383 + -0.2 378,384 - -0.2 378,756 - MPMX19_04921 0.61 +0.9 378,756 - MPMX19_04921 0.61 +0.2 378,884 + MPMX19_04921 0.84 -1.2 378,884 + MPMX19_04921 0.84 -1.2 378,884 + MPMX19_04921 0.84 +0.9 378,884 + MPMX19_04921 0.84 +0.1 378,884 + MPMX19_04921 0.84 -1.3 378,885 - MPMX19_04921 0.84 +0.6 378,968 + +0.1 378,968 + +0.6 378,968 + +0.2 378,968 + -0.3 378,969 - -1.8 378,969 - +1.2 378,969 - -1.6 378,996 + -0.1 378,996 + -0.8 378,996 + +0.2 378,997 - -1.1 378,997 - -0.1 379,024 - -0.8
Or see this region's nucleotide sequence