Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04749 and MPMX19_04750 overlap by 4 nucleotides MPMX19_04750 and MPMX19_04751 overlap by 4 nucleotides MPMX19_04751 and MPMX19_04752 are separated by 152 nucleotides
MPMX19_04749: MPMX19_04749 - hypothetical protein, at 140,060 to 141,484
_04749
MPMX19_04750: MPMX19_04750 - hypothetical protein, at 141,481 to 142,116
_04750
MPMX19_04751: MPMX19_04751 - hypothetical protein, at 142,113 to 142,814
_04751
MPMX19_04752: MPMX19_04752 - putative transporter YycB, at 142,967 to 144,235
_04752
Position (kb) 142
143 Strain fitness (log2 ratio) -2
-1
0
1 at 141.203 kb on + strand, within MPMX19_04749 at 141.203 kb on + strand, within MPMX19_04749 at 141.203 kb on + strand, within MPMX19_04749 at 141.204 kb on - strand, within MPMX19_04749 at 141.204 kb on - strand, within MPMX19_04749 at 141.204 kb on - strand, within MPMX19_04749 at 141.204 kb on - strand, within MPMX19_04749 at 141.204 kb on - strand, within MPMX19_04749 at 141.204 kb on - strand, within MPMX19_04749 at 141.204 kb on - strand, within MPMX19_04749 at 141.239 kb on + strand, within MPMX19_04749 at 141.239 kb on + strand, within MPMX19_04749 at 141.239 kb on + strand, within MPMX19_04749 at 141.239 kb on + strand, within MPMX19_04749 at 141.240 kb on - strand, within MPMX19_04749 at 141.248 kb on + strand, within MPMX19_04749 at 141.248 kb on + strand, within MPMX19_04749 at 141.249 kb on - strand, within MPMX19_04749 at 141.249 kb on - strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.290 kb on + strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.291 kb on - strand, within MPMX19_04749 at 141.344 kb on + strand at 141.345 kb on - strand at 141.819 kb on + strand, within MPMX19_04750 at 141.819 kb on + strand, within MPMX19_04750 at 141.940 kb on + strand, within MPMX19_04750 at 141.940 kb on + strand, within MPMX19_04750 at 141.940 kb on + strand, within MPMX19_04750 at 141.940 kb on + strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 141.941 kb on - strand, within MPMX19_04750 at 142.518 kb on - strand, within MPMX19_04751 at 143.474 kb on + strand, within MPMX19_04752 at 143.474 kb on + strand, within MPMX19_04752 at 143.474 kb on + strand, within MPMX19_04752 at 143.474 kb on + strand, within MPMX19_04752 at 143.474 kb on + strand, within MPMX19_04752 at 143.475 kb on - strand, within MPMX19_04752 at 143.475 kb on - strand, within MPMX19_04752 at 143.475 kb on - strand, within MPMX19_04752 at 143.475 kb on - strand, within MPMX19_04752 at 143.475 kb on - strand, within MPMX19_04752 at 143.729 kb on + strand, within MPMX19_04752 at 143.729 kb on + strand, within MPMX19_04752 at 143.729 kb on + strand, within MPMX19_04752 at 143.730 kb on - strand, within MPMX19_04752
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 141,203 + MPMX19_04749 0.80 -1.1 141,203 + MPMX19_04749 0.80 -0.3 141,203 + MPMX19_04749 0.80 -1.2 141,204 - MPMX19_04749 0.80 -0.4 141,204 - MPMX19_04749 0.80 +0.8 141,204 - MPMX19_04749 0.80 +1.2 141,204 - MPMX19_04749 0.80 +0.1 141,204 - MPMX19_04749 0.80 -0.5 141,204 - MPMX19_04749 0.80 -0.3 141,204 - MPMX19_04749 0.80 +0.4 141,239 + MPMX19_04749 0.83 -0.2 141,239 + MPMX19_04749 0.83 +0.2 141,239 + MPMX19_04749 0.83 -0.1 141,239 + MPMX19_04749 0.83 -0.4 141,240 - MPMX19_04749 0.83 +0.2 141,248 + MPMX19_04749 0.83 +0.3 141,248 + MPMX19_04749 0.83 -0.0 141,249 - MPMX19_04749 0.83 -0.3 141,249 - MPMX19_04749 0.83 +0.5 141,290 + MPMX19_04749 0.86 +0.8 141,290 + MPMX19_04749 0.86 -0.7 141,290 + MPMX19_04749 0.86 -0.3 141,290 + MPMX19_04749 0.86 -0.5 141,290 + MPMX19_04749 0.86 -1.1 141,290 + MPMX19_04749 0.86 -0.5 141,290 + MPMX19_04749 0.86 +1.7 141,290 + MPMX19_04749 0.86 -1.1 141,290 + MPMX19_04749 0.86 +0.8 141,290 + MPMX19_04749 0.86 -0.8 141,290 + MPMX19_04749 0.86 +0.1 141,290 + MPMX19_04749 0.86 -0.2 141,290 + MPMX19_04749 0.86 -0.7 141,290 + MPMX19_04749 0.86 -0.5 141,290 + MPMX19_04749 0.86 -0.5 141,291 - MPMX19_04749 0.86 +0.6 141,291 - MPMX19_04749 0.86 -1.9 141,291 - MPMX19_04749 0.86 +0.1 141,291 - MPMX19_04749 0.86 +0.4 141,291 - MPMX19_04749 0.86 -1.1 141,291 - MPMX19_04749 0.86 -1.3 141,291 - MPMX19_04749 0.86 +1.2 141,291 - MPMX19_04749 0.86 -2.0 141,291 - MPMX19_04749 0.86 +0.6 141,291 - MPMX19_04749 0.86 -0.3 141,291 - MPMX19_04749 0.86 +0.6 141,291 - MPMX19_04749 0.86 -0.6 141,291 - MPMX19_04749 0.86 -1.3 141,291 - MPMX19_04749 0.86 -0.5 141,291 - MPMX19_04749 0.86 -1.4 141,344 + -1.1 141,345 - +0.5 141,819 + MPMX19_04750 0.53 -2.1 141,819 + MPMX19_04750 0.53 +1.0 141,940 + MPMX19_04750 0.72 +0.3 141,940 + MPMX19_04750 0.72 +1.1 141,940 + MPMX19_04750 0.72 +0.4 141,940 + MPMX19_04750 0.72 -0.2 141,941 - MPMX19_04750 0.72 +1.7 141,941 - MPMX19_04750 0.72 +1.0 141,941 - MPMX19_04750 0.72 -2.0 141,941 - MPMX19_04750 0.72 -0.3 141,941 - MPMX19_04750 0.72 -0.5 141,941 - MPMX19_04750 0.72 +0.9 141,941 - MPMX19_04750 0.72 -0.4 141,941 - MPMX19_04750 0.72 -2.0 141,941 - MPMX19_04750 0.72 +0.5 141,941 - MPMX19_04750 0.72 -1.2 141,941 - MPMX19_04750 0.72 +0.1 141,941 - MPMX19_04750 0.72 -1.6 142,518 - MPMX19_04751 0.58 -0.9 143,474 + MPMX19_04752 0.40 +1.0 143,474 + MPMX19_04752 0.40 -1.9 143,474 + MPMX19_04752 0.40 -0.3 143,474 + MPMX19_04752 0.40 -2.2 143,474 + MPMX19_04752 0.40 -0.6 143,475 - MPMX19_04752 0.40 -0.6 143,475 - MPMX19_04752 0.40 -0.4 143,475 - MPMX19_04752 0.40 +0.0 143,475 - MPMX19_04752 0.40 +0.6 143,475 - MPMX19_04752 0.40 -1.0 143,729 + MPMX19_04752 0.60 +0.6 143,729 + MPMX19_04752 0.60 -0.1 143,729 + MPMX19_04752 0.60 -0.6 143,730 - MPMX19_04752 0.60 -0.9
Or see this region's nucleotide sequence