Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04191 and MPMX19_04192 are separated by 8 nucleotides MPMX19_04192 and MPMX19_04193 are separated by 281 nucleotides MPMX19_04193 and MPMX19_04194 are separated by 19 nucleotides
MPMX19_04191: MPMX19_04191 - hypothetical protein, at 523,553 to 525,835
_04191
MPMX19_04192: MPMX19_04192 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, at 525,844 to 526,605
_04192
MPMX19_04193: MPMX19_04193 - hypothetical protein, at 526,887 to 527,288
_04193
MPMX19_04194: MPMX19_04194 - hypothetical protein, at 527,308 to 527,652
_04194
Position (kb) 525
526
527 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.903 kb on + strand, within MPMX19_04191 at 524.904 kb on - strand, within MPMX19_04191 at 524.904 kb on - strand, within MPMX19_04191 at 524.904 kb on - strand, within MPMX19_04191 at 524.904 kb on - strand, within MPMX19_04191 at 524.904 kb on - strand, within MPMX19_04191 at 524.904 kb on - strand, within MPMX19_04191 at 525.461 kb on + strand, within MPMX19_04191 at 525.462 kb on - strand, within MPMX19_04191 at 525.476 kb on + strand, within MPMX19_04191 at 525.495 kb on - strand, within MPMX19_04191 at 525.644 kb on + strand at 525.644 kb on + strand at 525.644 kb on + strand at 525.644 kb on + strand at 525.644 kb on + strand at 525.644 kb on + strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.645 kb on - strand at 525.833 kb on + strand at 525.833 kb on + strand at 525.833 kb on + strand at 525.834 kb on - strand at 525.834 kb on - strand at 525.834 kb on - strand at 525.834 kb on - strand at 525.929 kb on + strand, within MPMX19_04192 at 525.929 kb on + strand, within MPMX19_04192 at 525.929 kb on + strand, within MPMX19_04192 at 525.929 kb on + strand, within MPMX19_04192 at 525.930 kb on - strand, within MPMX19_04192 at 525.930 kb on - strand, within MPMX19_04192 at 525.965 kb on + strand, within MPMX19_04192 at 525.965 kb on + strand, within MPMX19_04192 at 525.965 kb on + strand, within MPMX19_04192 at 525.965 kb on + strand, within MPMX19_04192 at 525.965 kb on + strand, within MPMX19_04192 at 525.966 kb on - strand, within MPMX19_04192 at 525.966 kb on - strand, within MPMX19_04192 at 525.966 kb on - strand, within MPMX19_04192 at 526.193 kb on + strand, within MPMX19_04192 at 526.193 kb on + strand, within MPMX19_04192 at 526.193 kb on + strand, within MPMX19_04192 at 526.194 kb on - strand, within MPMX19_04192 at 526.194 kb on - strand, within MPMX19_04192 at 526.194 kb on - strand, within MPMX19_04192 at 526.337 kb on + strand, within MPMX19_04192 at 526.337 kb on + strand, within MPMX19_04192 at 526.337 kb on + strand, within MPMX19_04192 at 526.337 kb on + strand, within MPMX19_04192 at 526.337 kb on + strand, within MPMX19_04192 at 526.338 kb on - strand, within MPMX19_04192 at 526.338 kb on - strand, within MPMX19_04192 at 526.338 kb on - strand, within MPMX19_04192 at 526.669 kb on - strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.779 kb on + strand at 526.780 kb on - strand at 526.780 kb on - strand at 526.780 kb on - strand at 526.780 kb on - strand at 526.780 kb on - strand at 526.780 kb on - strand at 526.780 kb on - strand at 526.780 kb on - strand at 526.806 kb on + strand at 526.806 kb on + strand at 526.806 kb on + strand at 526.806 kb on + strand at 526.806 kb on + strand at 526.806 kb on + strand at 526.807 kb on - strand at 526.807 kb on - strand at 526.807 kb on - strand at 526.807 kb on - strand at 526.807 kb on - strand at 526.807 kb on - strand at 526.817 kb on + strand at 526.817 kb on + strand at 526.817 kb on + strand at 526.817 kb on + strand at 526.817 kb on + strand at 526.817 kb on + strand at 526.817 kb on + strand at 526.817 kb on + strand at 526.817 kb on + strand at 526.818 kb on - strand at 526.818 kb on - strand at 526.818 kb on - strand at 526.828 kb on + strand at 526.994 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.088 kb on + strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.089 kb on - strand, within MPMX19_04193 at 527.371 kb on + strand, within MPMX19_04194
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 524,903 + MPMX19_04191 0.59 -1.0 524,903 + MPMX19_04191 0.59 -0.7 524,903 + MPMX19_04191 0.59 +0.6 524,903 + MPMX19_04191 0.59 +0.2 524,903 + MPMX19_04191 0.59 -0.4 524,903 + MPMX19_04191 0.59 +1.0 524,903 + MPMX19_04191 0.59 +0.0 524,903 + MPMX19_04191 0.59 -0.9 524,903 + MPMX19_04191 0.59 -0.9 524,903 + MPMX19_04191 0.59 -1.5 524,903 + MPMX19_04191 0.59 -1.4 524,903 + MPMX19_04191 0.59 -0.4 524,904 - MPMX19_04191 0.59 -0.5 524,904 - MPMX19_04191 0.59 -0.7 524,904 - MPMX19_04191 0.59 +0.9 524,904 - MPMX19_04191 0.59 +0.1 524,904 - MPMX19_04191 0.59 +0.0 524,904 - MPMX19_04191 0.59 -0.0 525,461 + MPMX19_04191 0.84 +0.6 525,462 - MPMX19_04191 0.84 +0.3 525,476 + MPMX19_04191 0.84 +0.2 525,495 - MPMX19_04191 0.85 -1.2 525,644 + +3.6 525,644 + -0.3 525,644 + -0.5 525,644 + -0.8 525,644 + -0.7 525,644 + -1.9 525,645 - -1.7 525,645 - -0.7 525,645 - -0.8 525,645 - -1.2 525,645 - +0.3 525,645 - -0.2 525,645 - +0.8 525,645 - +0.2 525,645 - -0.6 525,645 - -1.4 525,645 - -1.5 525,645 - -0.0 525,645 - +0.1 525,833 + -0.9 525,833 + -2.1 525,833 + +0.5 525,834 - -0.5 525,834 - +0.9 525,834 - -0.3 525,834 - +1.0 525,929 + MPMX19_04192 0.11 -0.4 525,929 + MPMX19_04192 0.11 +1.6 525,929 + MPMX19_04192 0.11 +0.2 525,929 + MPMX19_04192 0.11 -1.1 525,930 - MPMX19_04192 0.11 -0.1 525,930 - MPMX19_04192 0.11 +0.6 525,965 + MPMX19_04192 0.16 +0.9 525,965 + MPMX19_04192 0.16 +0.6 525,965 + MPMX19_04192 0.16 +0.7 525,965 + MPMX19_04192 0.16 -1.1 525,965 + MPMX19_04192 0.16 +2.3 525,966 - MPMX19_04192 0.16 +0.2 525,966 - MPMX19_04192 0.16 -1.5 525,966 - MPMX19_04192 0.16 -0.7 526,193 + MPMX19_04192 0.46 -1.5 526,193 + MPMX19_04192 0.46 +0.9 526,193 + MPMX19_04192 0.46 -0.4 526,194 - MPMX19_04192 0.46 +0.3 526,194 - MPMX19_04192 0.46 -0.2 526,194 - MPMX19_04192 0.46 +1.0 526,337 + MPMX19_04192 0.65 -2.5 526,337 + MPMX19_04192 0.65 +1.0 526,337 + MPMX19_04192 0.65 -2.3 526,337 + MPMX19_04192 0.65 -0.1 526,337 + MPMX19_04192 0.65 -0.9 526,338 - MPMX19_04192 0.65 +0.8 526,338 - MPMX19_04192 0.65 -1.5 526,338 - MPMX19_04192 0.65 -0.8 526,669 - -0.8 526,779 + +0.3 526,779 + +0.0 526,779 + -0.1 526,779 + +0.6 526,779 + +0.1 526,779 + -0.2 526,779 + -1.0 526,779 + -2.0 526,779 + -1.3 526,779 + -2.1 526,779 + +0.7 526,779 + -0.5 526,780 - -0.7 526,780 - -0.4 526,780 - -0.3 526,780 - -0.9 526,780 - +0.8 526,780 - -1.7 526,780 - -2.1 526,780 - -0.7 526,806 + -0.4 526,806 + +0.2 526,806 + -0.5 526,806 + -0.2 526,806 + -0.7 526,806 + +1.4 526,807 - -1.4 526,807 - -1.1 526,807 - -0.2 526,807 - -0.8 526,807 - -0.3 526,807 - +0.9 526,817 + +0.6 526,817 + -0.2 526,817 + +1.6 526,817 + -0.3 526,817 + -0.5 526,817 + +0.3 526,817 + -0.4 526,817 + -0.9 526,817 + -0.7 526,818 - -1.0 526,818 - -0.6 526,818 - -0.1 526,828 + +0.8 526,994 + MPMX19_04193 0.27 -0.5 527,088 + MPMX19_04193 0.50 -0.5 527,088 + MPMX19_04193 0.50 -1.0 527,088 + MPMX19_04193 0.50 +0.2 527,088 + MPMX19_04193 0.50 -0.2 527,088 + MPMX19_04193 0.50 -0.5 527,088 + MPMX19_04193 0.50 -1.7 527,088 + MPMX19_04193 0.50 +0.1 527,088 + MPMX19_04193 0.50 -0.0 527,088 + MPMX19_04193 0.50 -1.0 527,088 + MPMX19_04193 0.50 +0.2 527,088 + MPMX19_04193 0.50 -1.3 527,088 + MPMX19_04193 0.50 -0.4 527,088 + MPMX19_04193 0.50 -1.7 527,088 + MPMX19_04193 0.50 -1.0 527,088 + MPMX19_04193 0.50 -0.5 527,088 + MPMX19_04193 0.50 +0.4 527,088 + MPMX19_04193 0.50 -2.2 527,088 + MPMX19_04193 0.50 -1.9 527,088 + MPMX19_04193 0.50 -0.9 527,089 - MPMX19_04193 0.50 -1.8 527,089 - MPMX19_04193 0.50 -1.2 527,089 - MPMX19_04193 0.50 +0.8 527,089 - MPMX19_04193 0.50 -0.0 527,089 - MPMX19_04193 0.50 -0.2 527,089 - MPMX19_04193 0.50 -2.3 527,089 - MPMX19_04193 0.50 -0.6 527,089 - MPMX19_04193 0.50 +0.8 527,089 - MPMX19_04193 0.50 +0.2 527,089 - MPMX19_04193 0.50 +1.0 527,089 - MPMX19_04193 0.50 -1.2 527,089 - MPMX19_04193 0.50 -0.9 527,089 - MPMX19_04193 0.50 -0.3 527,371 + MPMX19_04194 0.18 -1.1
Or see this region's nucleotide sequence