Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03884 and MPMX19_03885 overlap by 1 nucleotides MPMX19_03885 and MPMX19_03886 are separated by 601 nucleotides
MPMX19_03884: MPMX19_03884 - hypothetical protein, at 141,122 to 142,891
_03884
MPMX19_03885: MPMX19_03885 - Lipopolysaccharide assembly protein B, at 142,891 to 144,777
_03885
MPMX19_03886: MPMX19_03886 - hypothetical protein, at 145,379 to 160,201
_03886
Position (kb)
142
143
144
145 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 142.251 kb on - strand, within MPMX19_03884 at 142.532 kb on + strand, within MPMX19_03884 at 142.532 kb on + strand, within MPMX19_03884 at 142.533 kb on - strand, within MPMX19_03884 at 142.625 kb on + strand, within MPMX19_03884 at 142.625 kb on + strand, within MPMX19_03884 at 142.625 kb on + strand, within MPMX19_03884 at 142.625 kb on + strand, within MPMX19_03884 at 142.625 kb on + strand, within MPMX19_03884 at 142.625 kb on + strand, within MPMX19_03884 at 142.626 kb on - strand, within MPMX19_03884 at 142.626 kb on - strand, within MPMX19_03884 at 142.626 kb on - strand, within MPMX19_03884 at 142.635 kb on - strand, within MPMX19_03884 at 142.635 kb on - strand, within MPMX19_03884 at 143.267 kb on + strand, within MPMX19_03885 at 143.267 kb on + strand, within MPMX19_03885 at 143.272 kb on + strand, within MPMX19_03885 at 143.272 kb on + strand, within MPMX19_03885 at 143.272 kb on + strand, within MPMX19_03885 at 143.272 kb on + strand, within MPMX19_03885 at 143.272 kb on + strand, within MPMX19_03885 at 143.272 kb on + strand, within MPMX19_03885 at 143.272 kb on + strand, within MPMX19_03885 at 143.272 kb on + strand, within MPMX19_03885 at 143.272 kb on + strand, within MPMX19_03885 at 143.273 kb on - strand, within MPMX19_03885 at 143.273 kb on - strand, within MPMX19_03885 at 143.273 kb on - strand, within MPMX19_03885 at 143.273 kb on - strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.374 kb on + strand, within MPMX19_03885 at 143.375 kb on - strand, within MPMX19_03885 at 143.375 kb on - strand, within MPMX19_03885 at 143.375 kb on - strand, within MPMX19_03885 at 143.375 kb on - strand, within MPMX19_03885 at 143.375 kb on - strand, within MPMX19_03885 at 143.375 kb on - strand, within MPMX19_03885 at 143.375 kb on - strand, within MPMX19_03885 at 143.375 kb on - strand, within MPMX19_03885 at 143.375 kb on - strand, within MPMX19_03885 at 143.546 kb on - strand, within MPMX19_03885 at 143.692 kb on + strand, within MPMX19_03885 at 143.692 kb on + strand, within MPMX19_03885 at 143.693 kb on - strand, within MPMX19_03885 at 143.693 kb on - strand, within MPMX19_03885 at 143.693 kb on - strand, within MPMX19_03885 at 143.693 kb on - strand, within MPMX19_03885 at 143.693 kb on - strand, within MPMX19_03885 at 143.693 kb on - strand, within MPMX19_03885 at 143.693 kb on - strand, within MPMX19_03885 at 143.785 kb on + strand, within MPMX19_03885 at 143.785 kb on + strand, within MPMX19_03885 at 143.785 kb on + strand, within MPMX19_03885 at 143.786 kb on - strand, within MPMX19_03885 at 143.786 kb on - strand, within MPMX19_03885 at 143.786 kb on - strand, within MPMX19_03885 at 143.786 kb on - strand, within MPMX19_03885 at 144.034 kb on + strand, within MPMX19_03885 at 144.035 kb on - strand, within MPMX19_03885 at 144.035 kb on - strand, within MPMX19_03885 at 144.309 kb on + strand, within MPMX19_03885 at 144.309 kb on + strand, within MPMX19_03885 at 144.418 kb on + strand, within MPMX19_03885 at 144.419 kb on - strand, within MPMX19_03885 at 144.434 kb on + strand, within MPMX19_03885 at 144.434 kb on + strand, within MPMX19_03885 at 144.434 kb on + strand, within MPMX19_03885 at 144.435 kb on - strand, within MPMX19_03885 at 144.435 kb on - strand, within MPMX19_03885 at 144.435 kb on - strand, within MPMX19_03885 at 144.435 kb on - strand, within MPMX19_03885 at 144.455 kb on - strand, within MPMX19_03885 at 144.455 kb on - strand, within MPMX19_03885 at 144.455 kb on - strand, within MPMX19_03885 at 144.455 kb on - strand, within MPMX19_03885 at 144.455 kb on - strand, within MPMX19_03885 at 144.601 kb on + strand at 144.601 kb on + strand at 144.601 kb on + strand at 144.601 kb on + strand at 144.602 kb on - strand at 144.602 kb on - strand at 144.973 kb on + strand at 144.973 kb on + strand at 145.028 kb on + strand at 145.191 kb on - strand at 145.198 kb on + strand at 145.199 kb on - strand at 145.264 kb on + strand at 145.264 kb on + strand at 145.376 kb on + strand at 145.376 kb on + strand at 145.376 kb on + strand at 145.376 kb on + strand at 145.377 kb on - strand at 145.377 kb on - strand at 145.377 kb on - strand at 145.377 kb on - strand at 145.377 kb on - strand at 145.377 kb on - strand at 145.377 kb on - strand at 145.377 kb on - strand at 145.390 kb on + strand at 145.390 kb on + strand at 145.390 kb on + strand at 145.390 kb on + strand at 145.391 kb on - strand at 145.391 kb on - strand at 145.391 kb on - strand at 145.513 kb on + strand at 145.513 kb on + strand at 145.513 kb on + strand at 145.513 kb on + strand at 145.513 kb on + strand at 145.513 kb on + strand at 145.513 kb on + strand at 145.513 kb on + strand at 145.513 kb on + strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.514 kb on - strand at 145.658 kb on + strand at 145.658 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 142,251 - MPMX19_03884 0.64 -0.0 142,532 + MPMX19_03884 0.80 -1.5 142,532 + MPMX19_03884 0.80 +1.4 142,533 - MPMX19_03884 0.80 -0.1 142,625 + MPMX19_03884 0.85 +0.5 142,625 + MPMX19_03884 0.85 -0.2 142,625 + MPMX19_03884 0.85 +0.9 142,625 + MPMX19_03884 0.85 -2.0 142,625 + MPMX19_03884 0.85 +0.8 142,625 + MPMX19_03884 0.85 -1.7 142,626 - MPMX19_03884 0.85 -0.2 142,626 - MPMX19_03884 0.85 -1.1 142,626 - MPMX19_03884 0.85 -2.3 142,635 - MPMX19_03884 0.85 +0.7 142,635 - MPMX19_03884 0.85 -1.2 143,267 + MPMX19_03885 0.20 -0.7 143,267 + MPMX19_03885 0.20 +0.9 143,272 + MPMX19_03885 0.20 -0.5 143,272 + MPMX19_03885 0.20 +0.3 143,272 + MPMX19_03885 0.20 -0.7 143,272 + MPMX19_03885 0.20 -1.0 143,272 + MPMX19_03885 0.20 +1.8 143,272 + MPMX19_03885 0.20 -0.8 143,272 + MPMX19_03885 0.20 +0.5 143,272 + MPMX19_03885 0.20 +0.5 143,272 + MPMX19_03885 0.20 -1.9 143,273 - MPMX19_03885 0.20 +1.4 143,273 - MPMX19_03885 0.20 +0.2 143,273 - MPMX19_03885 0.20 +1.2 143,273 - MPMX19_03885 0.20 -0.4 143,374 + MPMX19_03885 0.26 -0.5 143,374 + MPMX19_03885 0.26 -0.3 143,374 + MPMX19_03885 0.26 -0.2 143,374 + MPMX19_03885 0.26 +1.0 143,374 + MPMX19_03885 0.26 -1.0 143,374 + MPMX19_03885 0.26 -1.8 143,374 + MPMX19_03885 0.26 -0.1 143,374 + MPMX19_03885 0.26 -2.4 143,374 + MPMX19_03885 0.26 -1.4 143,374 + MPMX19_03885 0.26 -0.4 143,374 + MPMX19_03885 0.26 -0.4 143,374 + MPMX19_03885 0.26 -0.6 143,374 + MPMX19_03885 0.26 -0.7 143,374 + MPMX19_03885 0.26 +1.8 143,375 - MPMX19_03885 0.26 +1.2 143,375 - MPMX19_03885 0.26 +1.2 143,375 - MPMX19_03885 0.26 -0.8 143,375 - MPMX19_03885 0.26 +0.3 143,375 - MPMX19_03885 0.26 -0.8 143,375 - MPMX19_03885 0.26 -1.3 143,375 - MPMX19_03885 0.26 +0.0 143,375 - MPMX19_03885 0.26 -1.7 143,375 - MPMX19_03885 0.26 -1.4 143,546 - MPMX19_03885 0.35 -2.0 143,692 + MPMX19_03885 0.42 -1.7 143,692 + MPMX19_03885 0.42 -1.8 143,693 - MPMX19_03885 0.43 +0.2 143,693 - MPMX19_03885 0.43 +0.4 143,693 - MPMX19_03885 0.43 -0.5 143,693 - MPMX19_03885 0.43 -1.0 143,693 - MPMX19_03885 0.43 -0.5 143,693 - MPMX19_03885 0.43 -0.1 143,693 - MPMX19_03885 0.43 +0.1 143,785 + MPMX19_03885 0.47 -0.0 143,785 + MPMX19_03885 0.47 -0.6 143,785 + MPMX19_03885 0.47 -1.7 143,786 - MPMX19_03885 0.47 +0.8 143,786 - MPMX19_03885 0.47 +0.8 143,786 - MPMX19_03885 0.47 +0.2 143,786 - MPMX19_03885 0.47 -2.3 144,034 + MPMX19_03885 0.61 -0.9 144,035 - MPMX19_03885 0.61 +0.3 144,035 - MPMX19_03885 0.61 +0.8 144,309 + MPMX19_03885 0.75 -1.2 144,309 + MPMX19_03885 0.75 -1.7 144,418 + MPMX19_03885 0.81 -0.2 144,419 - MPMX19_03885 0.81 -0.3 144,434 + MPMX19_03885 0.82 -0.1 144,434 + MPMX19_03885 0.82 -0.9 144,434 + MPMX19_03885 0.82 -0.5 144,435 - MPMX19_03885 0.82 -0.5 144,435 - MPMX19_03885 0.82 +0.6 144,435 - MPMX19_03885 0.82 -1.3 144,435 - MPMX19_03885 0.82 -1.5 144,455 - MPMX19_03885 0.83 -1.0 144,455 - MPMX19_03885 0.83 -0.6 144,455 - MPMX19_03885 0.83 -0.2 144,455 - MPMX19_03885 0.83 -1.9 144,455 - MPMX19_03885 0.83 -0.1 144,601 + +1.2 144,601 + -1.1 144,601 + -0.2 144,601 + -0.7 144,602 - -0.5 144,602 - -1.6 144,973 + -1.8 144,973 + -1.5 145,028 + +1.1 145,191 - +0.9 145,198 + -1.6 145,199 - -1.7 145,264 + -0.3 145,264 + -0.1 145,376 + +0.4 145,376 + -0.1 145,376 + -1.8 145,376 + +0.2 145,377 - -0.5 145,377 - -1.9 145,377 - -2.4 145,377 - -1.8 145,377 - +0.5 145,377 - -0.2 145,377 - -1.2 145,377 - -0.2 145,390 + +1.6 145,390 + +0.1 145,390 + -0.7 145,390 + -1.1 145,391 - -0.2 145,391 - -0.7 145,391 - +0.8 145,513 + +0.1 145,513 + +1.8 145,513 + +0.3 145,513 + -0.0 145,513 + +0.6 145,513 + -1.8 145,513 + -0.8 145,513 + -0.8 145,513 + -0.9 145,514 - +0.1 145,514 - -1.2 145,514 - -0.4 145,514 - -1.2 145,514 - -1.2 145,514 - -1.5 145,514 - +1.2 145,514 - +0.4 145,514 - -0.7 145,514 - -0.8 145,514 - -0.5 145,514 - +2.8 145,514 - -2.1 145,658 + +1.4 145,658 + -0.0
Or see this region's nucleotide sequence