Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03773 and MPMX19_03774 overlap by 8 nucleotides MPMX19_03774 and MPMX19_03775 are separated by 2 nucleotides MPMX19_03775 and MPMX19_03776 overlap by 4 nucleotides MPMX19_03776 and MPMX19_03777 overlap by 4 nucleotides
MPMX19_03773: MPMX19_03773 - hypothetical protein, at 16,605 to 18,788
_03773
MPMX19_03774: MPMX19_03774 - hypothetical protein, at 18,781 to 19,557
_03774
MPMX19_03775: MPMX19_03775 - hypothetical protein, at 19,560 to 20,135
_03775
MPMX19_03776: MPMX19_03776 - hypothetical protein, at 20,132 to 20,497
_03776
MPMX19_03777: MPMX19_03777 - hypothetical protein, at 20,494 to 20,754
_03777
Position (kb) 18
19
20 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 17.875 kb on - strand, within MPMX19_03773 at 18.016 kb on - strand, within MPMX19_03773 at 18.016 kb on - strand, within MPMX19_03773 at 18.050 kb on - strand, within MPMX19_03773 at 18.050 kb on - strand, within MPMX19_03773 at 18.229 kb on - strand, within MPMX19_03773 at 18.229 kb on - strand, within MPMX19_03773 at 18.277 kb on - strand, within MPMX19_03773 at 18.277 kb on - strand, within MPMX19_03773 at 18.277 kb on - strand, within MPMX19_03773 at 18.277 kb on - strand, within MPMX19_03773 at 18.367 kb on - strand, within MPMX19_03773 at 18.780 kb on + strand at 18.781 kb on - strand at 18.970 kb on + strand, within MPMX19_03774 at 18.970 kb on + strand, within MPMX19_03774 at 18.970 kb on + strand, within MPMX19_03774 at 18.970 kb on + strand, within MPMX19_03774 at 18.970 kb on + strand, within MPMX19_03774 at 18.970 kb on + strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 18.971 kb on - strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.044 kb on + strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.045 kb on - strand, within MPMX19_03774 at 19.048 kb on + strand, within MPMX19_03774 at 19.048 kb on + strand, within MPMX19_03774 at 19.049 kb on - strand, within MPMX19_03774 at 19.049 kb on - strand, within MPMX19_03774 at 19.049 kb on - strand, within MPMX19_03774 at 19.049 kb on - strand, within MPMX19_03774 at 19.049 kb on - strand, within MPMX19_03774 at 19.049 kb on - strand, within MPMX19_03774 at 19.292 kb on - strand, within MPMX19_03774 at 19.292 kb on - strand, within MPMX19_03774 at 19.292 kb on - strand, within MPMX19_03774 at 19.292 kb on - strand, within MPMX19_03774 at 19.292 kb on - strand, within MPMX19_03774 at 19.292 kb on - strand, within MPMX19_03774 at 19.292 kb on - strand, within MPMX19_03774 at 19.572 kb on - strand at 19.578 kb on - strand at 19.578 kb on - strand at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.679 kb on - strand, within MPMX19_03775 at 19.741 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.978 kb on - strand, within MPMX19_03775 at 19.978 kb on - strand, within MPMX19_03775 at 20.020 kb on - strand, within MPMX19_03775 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 17,875 - MPMX19_03773 0.58 +0.6 17,875 - MPMX19_03773 0.58 -1.1 17,875 - MPMX19_03773 0.58 +0.8 17,875 - MPMX19_03773 0.58 -0.1 17,875 - MPMX19_03773 0.58 -1.8 17,875 - MPMX19_03773 0.58 -0.3 17,875 - MPMX19_03773 0.58 +0.4 17,875 - MPMX19_03773 0.58 -0.1 17,875 - MPMX19_03773 0.58 -3.0 17,875 - MPMX19_03773 0.58 +0.2 17,875 - MPMX19_03773 0.58 -0.1 18,016 - MPMX19_03773 0.65 +1.1 18,016 - MPMX19_03773 0.65 -1.2 18,050 - MPMX19_03773 0.66 -0.5 18,050 - MPMX19_03773 0.66 -0.8 18,229 - MPMX19_03773 0.74 -0.5 18,229 - MPMX19_03773 0.74 -1.0 18,277 - MPMX19_03773 0.77 -1.4 18,277 - MPMX19_03773 0.77 -1.2 18,277 - MPMX19_03773 0.77 -0.9 18,277 - MPMX19_03773 0.77 -0.8 18,367 - MPMX19_03773 0.81 -0.5 18,780 + -0.8 18,781 - -0.7 18,970 + MPMX19_03774 0.24 -1.1 18,970 + MPMX19_03774 0.24 -0.2 18,970 + MPMX19_03774 0.24 -0.0 18,970 + MPMX19_03774 0.24 -0.8 18,970 + MPMX19_03774 0.24 +0.8 18,970 + MPMX19_03774 0.24 -0.2 18,971 - MPMX19_03774 0.24 -0.6 18,971 - MPMX19_03774 0.24 -1.1 18,971 - MPMX19_03774 0.24 -0.1 18,971 - MPMX19_03774 0.24 +0.0 18,971 - MPMX19_03774 0.24 +0.6 18,971 - MPMX19_03774 0.24 +0.1 18,971 - MPMX19_03774 0.24 -1.7 18,971 - MPMX19_03774 0.24 -0.6 18,971 - MPMX19_03774 0.24 -1.2 18,971 - MPMX19_03774 0.24 -0.5 18,971 - MPMX19_03774 0.24 -1.7 19,044 + MPMX19_03774 0.34 -1.0 19,044 + MPMX19_03774 0.34 -0.2 19,044 + MPMX19_03774 0.34 +1.5 19,044 + MPMX19_03774 0.34 +1.5 19,044 + MPMX19_03774 0.34 +0.1 19,044 + MPMX19_03774 0.34 -2.7 19,044 + MPMX19_03774 0.34 -1.4 19,044 + MPMX19_03774 0.34 +1.8 19,044 + MPMX19_03774 0.34 +0.6 19,044 + MPMX19_03774 0.34 -0.7 19,044 + MPMX19_03774 0.34 -1.4 19,044 + MPMX19_03774 0.34 -0.8 19,044 + MPMX19_03774 0.34 -0.6 19,044 + MPMX19_03774 0.34 -0.6 19,044 + MPMX19_03774 0.34 -0.8 19,045 - MPMX19_03774 0.34 -0.9 19,045 - MPMX19_03774 0.34 +1.3 19,045 - MPMX19_03774 0.34 -0.0 19,045 - MPMX19_03774 0.34 -1.2 19,045 - MPMX19_03774 0.34 -1.5 19,045 - MPMX19_03774 0.34 -0.5 19,045 - MPMX19_03774 0.34 -0.8 19,045 - MPMX19_03774 0.34 +0.4 19,045 - MPMX19_03774 0.34 -0.2 19,045 - MPMX19_03774 0.34 +0.1 19,045 - MPMX19_03774 0.34 -0.2 19,045 - MPMX19_03774 0.34 -1.4 19,045 - MPMX19_03774 0.34 +0.8 19,045 - MPMX19_03774 0.34 -0.8 19,045 - MPMX19_03774 0.34 -0.7 19,045 - MPMX19_03774 0.34 +0.8 19,045 - MPMX19_03774 0.34 -0.8 19,048 + MPMX19_03774 0.34 +1.1 19,048 + MPMX19_03774 0.34 -1.2 19,049 - MPMX19_03774 0.34 +0.5 19,049 - MPMX19_03774 0.34 -0.2 19,049 - MPMX19_03774 0.34 -0.6 19,049 - MPMX19_03774 0.34 -1.1 19,049 - MPMX19_03774 0.34 -0.2 19,049 - MPMX19_03774 0.34 -2.0 19,292 - MPMX19_03774 0.66 -1.5 19,292 - MPMX19_03774 0.66 -1.0 19,292 - MPMX19_03774 0.66 -1.0 19,292 - MPMX19_03774 0.66 +0.1 19,292 - MPMX19_03774 0.66 -0.5 19,292 - MPMX19_03774 0.66 -0.1 19,292 - MPMX19_03774 0.66 -1.5 19,572 - -0.1 19,578 - -0.5 19,578 - +0.1 19,679 - MPMX19_03775 0.21 -1.0 19,679 - MPMX19_03775 0.21 -0.5 19,679 - MPMX19_03775 0.21 -0.3 19,679 - MPMX19_03775 0.21 +0.7 19,679 - MPMX19_03775 0.21 +1.4 19,679 - MPMX19_03775 0.21 -0.2 19,679 - MPMX19_03775 0.21 -1.0 19,679 - MPMX19_03775 0.21 +0.6 19,679 - MPMX19_03775 0.21 +0.4 19,679 - MPMX19_03775 0.21 -0.1 19,679 - MPMX19_03775 0.21 -0.7 19,679 - MPMX19_03775 0.21 -2.0 19,679 - MPMX19_03775 0.21 +0.2 19,679 - MPMX19_03775 0.21 -0.2 19,679 - MPMX19_03775 0.21 -1.1 19,679 - MPMX19_03775 0.21 -0.2 19,679 - MPMX19_03775 0.21 -0.7 19,679 - MPMX19_03775 0.21 +0.2 19,741 - MPMX19_03775 0.31 +1.1 19,951 - MPMX19_03775 0.68 +0.2 19,951 - MPMX19_03775 0.68 -0.2 19,951 - MPMX19_03775 0.68 +0.2 19,951 - MPMX19_03775 0.68 -0.2 19,951 - MPMX19_03775 0.68 -1.0 19,951 - MPMX19_03775 0.68 -1.1 19,951 - MPMX19_03775 0.68 -1.2 19,951 - MPMX19_03775 0.68 -2.5 19,978 - MPMX19_03775 0.73 -2.0 19,978 - MPMX19_03775 0.73 -0.2 20,020 - MPMX19_03775 0.80 -0.4 20,256 - MPMX19_03776 0.34 +1.2 20,256 - MPMX19_03776 0.34 -0.4 20,256 - MPMX19_03776 0.34 +0.2 20,256 - MPMX19_03776 0.34 +0.6 20,256 - MPMX19_03776 0.34 -1.2 20,256 - MPMX19_03776 0.34 -0.3 20,256 - MPMX19_03776 0.34 +0.1 20,256 - MPMX19_03776 0.34 +0.0 20,256 - MPMX19_03776 0.34 -0.4 20,256 - MPMX19_03776 0.34 -0.1 20,256 - MPMX19_03776 0.34 +1.3 20,256 - MPMX19_03776 0.34 +2.1 20,295 - MPMX19_03776 0.45 -0.8 20,295 - MPMX19_03776 0.45 +0.8 20,295 - MPMX19_03776 0.45 -0.7 20,295 - MPMX19_03776 0.45 +0.1 20,295 - MPMX19_03776 0.45 -0.5
Or see this region's nucleotide sequence