Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03702

Experiment: NF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF
1,140,284	+				-1.3
1,140,423	+		MPMX19_03701	0.24	-1.0
1,140,423	+		MPMX19_03701	0.24	-0.6
1,140,423	+		MPMX19_03701	0.24	+0.0
1,140,424	-		MPMX19_03701	0.24	+0.8
1,140,424	-		MPMX19_03701	0.24	-0.7
1,140,424	-		MPMX19_03701	0.24	-0.4
1,140,424	-		MPMX19_03701	0.24	+0.1
1,140,424	-		MPMX19_03701	0.24	-0.9
1,140,424	-		MPMX19_03701	0.24	-0.7
1,140,708	+		MPMX19_03701	0.55	-2.2
1,140,708	+		MPMX19_03701	0.55	-0.1
1,140,708	+		MPMX19_03701	0.55	-0.3
1,140,708	+		MPMX19_03701	0.55	-2.7
1,140,709	-		MPMX19_03701	0.55	-0.9
1,140,709	-		MPMX19_03701	0.55	+1.2
1,140,709	-		MPMX19_03701	0.55	-0.3
1,140,709	-		MPMX19_03701	0.55	+0.1
1,140,709	-		MPMX19_03701	0.55	-2.1
1,140,709	-		MPMX19_03701	0.55	-0.7
1,140,720	+		MPMX19_03701	0.56	+0.1
1,140,720	+		MPMX19_03701	0.56	-0.6
1,140,720	+		MPMX19_03701	0.56	+0.4
1,140,721	-		MPMX19_03701	0.57	-0.1
1,140,721	-		MPMX19_03701	0.57	-0.9
1,140,721	-		MPMX19_03701	0.57	+1.4
1,140,721	-		MPMX19_03701	0.57	-1.6
1,140,721	-		MPMX19_03701	0.57	-1.3
1,140,741	+		MPMX19_03701	0.59	-2.8
1,140,741	+		MPMX19_03701	0.59	+0.1
1,140,741	+		MPMX19_03701	0.59	-0.3
1,140,741	+		MPMX19_03701	0.59	-0.5
1,140,741	+		MPMX19_03701	0.59	+0.4
1,140,741	+		MPMX19_03701	0.59	-0.9
1,140,741	+		MPMX19_03701	0.59	-0.6
1,140,742	-		MPMX19_03701	0.59	+0.5
1,140,742	-		MPMX19_03701	0.59	+0.3
1,140,831	+		MPMX19_03701	0.69	+1.1
1,140,831	+		MPMX19_03701	0.69	-0.4
1,140,831	+		MPMX19_03701	0.69	+0.1
1,140,831	+		MPMX19_03701	0.69	-0.3
1,140,831	+		MPMX19_03701	0.69	-0.7
1,140,831	+		MPMX19_03701	0.69	-0.1
1,140,832	-		MPMX19_03701	0.69	-0.0
1,140,832	-		MPMX19_03701	0.69	-0.4
1,140,832	-		MPMX19_03701	0.69	+1.1
1,140,832	-		MPMX19_03701	0.69	-0.2
1,140,832	-		MPMX19_03701	0.69	+0.7
1,140,832	-		MPMX19_03701	0.69	+0.3
1,140,832	-		MPMX19_03701	0.69	-1.3
1,140,832	-		MPMX19_03701	0.69	+0.1
1,140,930	+		MPMX19_03701	0.80	+1.1
1,140,930	+		MPMX19_03701	0.80	-1.4
1,140,931	-		MPMX19_03701	0.80	-1.0
1,140,931	-		MPMX19_03701	0.80	+0.1
1,140,939	+		MPMX19_03701	0.81	-0.5
1,140,954	+		MPMX19_03701	0.82	+0.8
1,140,954	+		MPMX19_03701	0.82	-0.3
1,140,955	-		MPMX19_03701	0.82	+1.1
1,140,955	-		MPMX19_03701	0.82	-0.0
1,140,955	-		MPMX19_03701	0.82	+1.2
1,140,955	-		MPMX19_03701	0.82	-2.1
1,141,014	+		MPMX19_03701	0.89	-0.3
1,141,014	+		MPMX19_03701	0.89	+0.1
1,141,014	+		MPMX19_03701	0.89	-0.7
1,141,014	+		MPMX19_03701	0.89	+0.5
1,141,015	-		MPMX19_03701	0.89	-0.3
1,141,015	-		MPMX19_03701	0.89	+0.4
1,141,015	-		MPMX19_03701	0.89	+0.0
1,141,015	-		MPMX19_03701	0.89	+0.5
1,141,015	-		MPMX19_03701	0.89	-1.3
1,141,015	-		MPMX19_03701	0.89	+0.4
1,141,488	+		MPMX19_03702	0.15	+0.1
1,141,488	+		MPMX19_03702	0.15	+0.3
1,141,489	-		MPMX19_03702	0.15	+0.6
1,141,489	-		MPMX19_03702	0.15	-0.4
1,141,489	-		MPMX19_03702	0.15	-0.4
1,141,489	-		MPMX19_03702	0.15	+0.1
1,141,689	+		MPMX19_03702	0.27	-0.6
1,141,832	+		MPMX19_03702	0.36	+0.2
1,141,872	+		MPMX19_03702	0.39	-0.3
1,141,872	+		MPMX19_03702	0.39	+0.6
1,141,965	+		MPMX19_03702	0.45	+0.1
1,141,965	+		MPMX19_03702	0.45	-1.1
1,141,965	+		MPMX19_03702	0.45	+1.1
1,141,965	+		MPMX19_03702	0.45	+1.1
1,141,965	+		MPMX19_03702	0.45	-1.2
1,141,965	+		MPMX19_03702	0.45	+0.6
1,141,965	+		MPMX19_03702	0.45	-0.3
1,141,965	+		MPMX19_03702	0.45	-0.0
1,141,966	-		MPMX19_03702	0.45	-1.9
1,141,966	-		MPMX19_03702	0.45	+1.1
1,141,966	-		MPMX19_03702	0.45	+0.7
1,142,139	+		MPMX19_03702	0.56	+0.1
1,142,139	+		MPMX19_03702	0.56	+0.6
1,142,139	+		MPMX19_03702	0.56	+0.1
1,142,139	+		MPMX19_03702	0.56	+0.7
1,142,140	-		MPMX19_03702	0.56	+1.1
1,142,140	-		MPMX19_03702	0.56	+2.5
1,142,207	-		MPMX19_03702	0.60	+0.3
1,142,307	+		MPMX19_03702	0.66	-0.7
1,142,307	+		MPMX19_03702	0.66	-1.6
1,142,307	+		MPMX19_03702	0.66	+0.6
1,142,307	+		MPMX19_03702	0.66	+0.7
1,142,307	+		MPMX19_03702	0.66	+0.6
1,142,307	+		MPMX19_03702	0.66	-0.5
1,142,307	+		MPMX19_03702	0.66	-1.1
1,142,307	+		MPMX19_03702	0.66	-0.9
1,142,307	+		MPMX19_03702	0.66	+1.2
1,142,308	-		MPMX19_03702	0.66	-1.1
1,142,308	-		MPMX19_03702	0.66	+0.7
1,142,308	-		MPMX19_03702	0.66	-0.0
1,142,308	-		MPMX19_03702	0.66	-0.1
1,142,308	-		MPMX19_03702	0.66	-1.1
1,142,308	-		MPMX19_03702	0.66	+0.4
1,142,308	-		MPMX19_03702	0.66	-0.3
1,142,308	-		MPMX19_03702	0.66	-1.1
1,142,308	-		MPMX19_03702	0.66	-1.1
1,142,308	-		MPMX19_03702	0.66	-0.3
1,142,308	-		MPMX19_03702	0.66	+0.1
1,142,371	-		MPMX19_03702	0.70	-1.9
1,142,525	+		MPMX19_03702	0.80	+0.2
1,142,556	+		MPMX19_03702	0.82	-0.6
1,142,556	+		MPMX19_03702	0.82	-0.4
1,142,557	-		MPMX19_03702	0.82	-2.2
1,142,557	-		MPMX19_03702	0.82	+0.5
1,142,557	-		MPMX19_03702	0.82	+0.7
1,142,841	+				-1.3
1,142,841	+				+0.5
1,142,841	+				+1.0
1,142,841	+				-0.1
1,142,842	-				+0.7
1,142,842	-				-0.3
1,142,907	+				-0.4
1,142,908	-				-0.7
1,143,217	+		MPMX19_03703	0.33	-0.6
1,143,218	-		MPMX19_03703	0.33	-2.6
1,143,218	-		MPMX19_03703	0.33	-1.4
1,143,268	+		MPMX19_03703	0.40	-0.3
1,143,268	+		MPMX19_03703	0.40	+0.1
1,143,269	-		MPMX19_03703	0.40	-2.0
1,143,269	-		MPMX19_03703	0.40	-1.1
1,143,311	+		MPMX19_03703	0.46	-0.1
1,143,311	+		MPMX19_03703	0.46	-0.5
1,143,312	-		MPMX19_03703	0.46	-0.1
1,143,312	-		MPMX19_03703	0.46	+0.2
1,143,312	-		MPMX19_03703	0.46	+0.1
1,143,312	-		MPMX19_03703	0.46	-0.6
1,143,439	+		MPMX19_03703	0.64	+0.1
1,143,439	+		MPMX19_03703	0.64	-0.6
1,143,439	+		MPMX19_03703	0.64	-0.9
1,143,440	-		MPMX19_03703	0.64	+0.1
1,143,440	-		MPMX19_03703	0.64	+0.1
1,143,440	-		MPMX19_03703	0.64	+0.0
1,143,440	-		MPMX19_03703	0.64	-0.1
1,143,440	-		MPMX19_03703	0.64	+0.0
1,143,505	+		MPMX19_03703	0.73	-0.9
1,143,505	+		MPMX19_03703	0.73	+0.2
1,143,506	-		MPMX19_03703	0.73	-0.4
1,143,568	+		MPMX19_03703	0.82	-0.5
1,143,568	+		MPMX19_03703	0.82	-0.2
1,143,568	+		MPMX19_03703	0.82	+0.4
1,143,568	+		MPMX19_03703	0.82	-0.7
1,143,568	+		MPMX19_03703	0.82	-0.6
1,143,569	-		MPMX19_03703	0.82	-0.3
1,143,569	-		MPMX19_03703	0.82	+0.4
1,143,569	-		MPMX19_03703	0.82	-0.0
1,143,569	-		MPMX19_03703	0.82	-1.1
1,143,569	-		MPMX19_03703	0.82	-1.1
1,143,569	-		MPMX19_03703	0.82	-0.4
1,143,569	-		MPMX19_03703	0.82	-0.9
1,143,606	+		MPMX19_03703	0.87	+0.6
1,143,606	+		MPMX19_03703	0.87	+0.4
1,143,606	+		MPMX19_03703	0.87	+0.1
1,143,606	+		MPMX19_03703	0.87	+1.7
1,143,606	+		MPMX19_03703	0.87	+0.3
1,143,607	-		MPMX19_03703	0.87	-1.1
1,143,607	-		MPMX19_03703	0.87	-0.0
1,143,607	-		MPMX19_03703	0.87	-0.6
1,143,607	-		MPMX19_03703	0.87	-0.4
1,143,607	-		MPMX19_03703	0.87	-0.3
1,143,607	-		MPMX19_03703	0.87	+1.2
1,143,607	-		MPMX19_03703	0.87	-0.1
1,143,607	-		MPMX19_03703	0.87	+0.4