Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03692 and MPMX19_03693 are separated by 70 nucleotides MPMX19_03693 and MPMX19_03694 are separated by 279 nucleotides MPMX19_03694 and MPMX19_03695 are separated by 11 nucleotides MPMX19_03695 and MPMX19_03696 are separated by 276 nucleotides
MPMX19_03692: MPMX19_03692 - D-methionine-binding lipoprotein MetQ, at 1,132,186 to 1,133,001
_03692
MPMX19_03693: MPMX19_03693 - hypothetical protein, at 1,133,072 to 1,133,569
_03693
MPMX19_03694: MPMX19_03694 - hypothetical protein, at 1,133,849 to 1,134,226
_03694
MPMX19_03695: MPMX19_03695 - hypothetical protein, at 1,134,238 to 1,134,774
_03695
MPMX19_03696: MPMX19_03696 - Guanidinopropionase, at 1,135,051 to 1,136,103
_03696
Position (kb)
1133
1134
1135 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1133.340 kb on + strand, within MPMX19_03693 at 1133.340 kb on + strand, within MPMX19_03693 at 1133.340 kb on + strand, within MPMX19_03693 at 1133.341 kb on - strand, within MPMX19_03693 at 1133.341 kb on - strand, within MPMX19_03693 at 1133.341 kb on - strand, within MPMX19_03693 at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.747 kb on + strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.748 kb on - strand at 1133.803 kb on + strand at 1134.029 kb on + strand, within MPMX19_03694 at 1134.030 kb on - strand, within MPMX19_03694 at 1134.030 kb on - strand, within MPMX19_03694 at 1134.030 kb on - strand, within MPMX19_03694 at 1134.269 kb on + strand at 1134.270 kb on - strand at 1134.270 kb on - strand at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.335 kb on + strand, within MPMX19_03695 at 1134.336 kb on - strand, within MPMX19_03695 at 1134.336 kb on - strand, within MPMX19_03695 at 1134.336 kb on - strand, within MPMX19_03695 at 1134.630 kb on + strand, within MPMX19_03695 at 1134.707 kb on + strand, within MPMX19_03695 at 1134.708 kb on - strand, within MPMX19_03695 at 1134.708 kb on - strand, within MPMX19_03695 at 1134.708 kb on - strand, within MPMX19_03695 at 1134.768 kb on + strand at 1134.768 kb on + strand at 1134.768 kb on + strand at 1134.768 kb on + strand at 1134.768 kb on + strand at 1134.769 kb on - strand at 1134.769 kb on - strand at 1134.769 kb on - strand at 1134.769 kb on - strand at 1135.145 kb on + strand at 1135.145 kb on + strand at 1135.146 kb on - strand at 1135.146 kb on - strand at 1135.146 kb on - strand at 1135.146 kb on - strand at 1135.146 kb on - strand at 1135.146 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,133,340 + MPMX19_03693 0.54 -0.4 1,133,340 + MPMX19_03693 0.54 -1.3 1,133,340 + MPMX19_03693 0.54 -1.4 1,133,341 - MPMX19_03693 0.54 +0.2 1,133,341 - MPMX19_03693 0.54 -1.0 1,133,341 - MPMX19_03693 0.54 -1.3 1,133,747 + -1.2 1,133,747 + -0.8 1,133,747 + -1.1 1,133,747 + -0.5 1,133,747 + +0.3 1,133,747 + +1.1 1,133,747 + -1.3 1,133,747 + -0.3 1,133,747 + +0.7 1,133,747 + -1.6 1,133,747 + -1.9 1,133,747 + -1.0 1,133,747 + -1.2 1,133,747 + -1.1 1,133,747 + -0.5 1,133,747 + -0.9 1,133,747 + -0.1 1,133,748 - +0.0 1,133,748 - -0.3 1,133,748 - -0.4 1,133,748 - +0.7 1,133,748 - +1.1 1,133,748 - +1.7 1,133,748 - -0.9 1,133,748 - -0.9 1,133,748 - +0.1 1,133,748 - +2.3 1,133,748 - -0.1 1,133,748 - +1.7 1,133,803 + -0.3 1,134,029 + MPMX19_03694 0.48 +0.4 1,134,030 - MPMX19_03694 0.48 -0.0 1,134,030 - MPMX19_03694 0.48 +0.1 1,134,030 - MPMX19_03694 0.48 +0.1 1,134,269 + -0.8 1,134,270 - -1.0 1,134,270 - -0.9 1,134,335 + MPMX19_03695 0.18 -0.1 1,134,335 + MPMX19_03695 0.18 -1.7 1,134,335 + MPMX19_03695 0.18 -1.4 1,134,335 + MPMX19_03695 0.18 +0.2 1,134,335 + MPMX19_03695 0.18 -0.2 1,134,335 + MPMX19_03695 0.18 -0.6 1,134,335 + MPMX19_03695 0.18 +0.4 1,134,335 + MPMX19_03695 0.18 -0.6 1,134,335 + MPMX19_03695 0.18 -0.4 1,134,335 + MPMX19_03695 0.18 -1.0 1,134,335 + MPMX19_03695 0.18 -0.0 1,134,336 - MPMX19_03695 0.18 -1.0 1,134,336 - MPMX19_03695 0.18 -2.7 1,134,336 - MPMX19_03695 0.18 +1.0 1,134,630 + MPMX19_03695 0.73 -0.0 1,134,707 + MPMX19_03695 0.87 +0.4 1,134,708 - MPMX19_03695 0.88 -0.3 1,134,708 - MPMX19_03695 0.88 -0.5 1,134,708 - MPMX19_03695 0.88 -0.9 1,134,768 + -0.0 1,134,768 + +0.6 1,134,768 + -0.3 1,134,768 + -0.6 1,134,768 + -2.1 1,134,769 - +0.8 1,134,769 - +0.6 1,134,769 - +0.7 1,134,769 - +0.1 1,135,145 + -1.3 1,135,145 + -1.4 1,135,146 - +0.2 1,135,146 - +0.3 1,135,146 - -1.6 1,135,146 - -0.5 1,135,146 - +1.1 1,135,146 - -0.5
Or see this region's nucleotide sequence