Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03654

Experiment: NF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF
1,091,678	+		MPMX19_03653	0.38	-1.0
1,091,679	-		MPMX19_03653	0.38	-0.9
1,091,679	-		MPMX19_03653	0.38	+0.1
1,091,679	-		MPMX19_03653	0.38	+0.1
1,091,681	+		MPMX19_03653	0.39	-2.0
1,091,681	+		MPMX19_03653	0.39	-1.3
1,091,681	+		MPMX19_03653	0.39	-0.4
1,091,681	+		MPMX19_03653	0.39	+0.1
1,091,682	-		MPMX19_03653	0.39	-0.6
1,091,682	-		MPMX19_03653	0.39	-0.1
1,091,682	-		MPMX19_03653	0.39	+0.7
1,091,682	-		MPMX19_03653	0.39	-0.0
1,092,030	+		MPMX19_03653	0.62	-0.6
1,092,057	+		MPMX19_03653	0.64	+0.4
1,092,058	-		MPMX19_03653	0.64	-0.3
1,092,058	-		MPMX19_03653	0.64	-1.4
1,092,168	+		MPMX19_03653	0.72	-1.3
1,092,168	+		MPMX19_03653	0.72	+0.3
1,092,168	+		MPMX19_03653	0.72	-1.4
1,092,169	-		MPMX19_03653	0.72	+0.9
1,092,169	-		MPMX19_03653	0.72	+0.1
1,092,345	+		MPMX19_03653	0.84	+0.3
1,092,345	+		MPMX19_03653	0.84	+1.0
1,092,346	-		MPMX19_03653	0.84	+0.5
1,092,346	-		MPMX19_03653	0.84	+1.3
1,092,469	+				-1.4
1,092,469	+				-2.1
1,092,469	+				-1.6
1,092,469	+				-0.6
1,092,469	+				-2.2
1,092,469	+				-0.4
1,092,469	+				-1.3
1,092,469	+				+0.1
1,092,469	+				-1.2
1,092,469	+				+0.9
1,092,469	+				+0.4
1,092,469	+				+0.4
1,092,469	+				+1.1
1,092,469	+				-0.5
1,092,469	+				-1.1
1,092,469	+				+0.5
1,092,469	+				-1.2
1,092,469	+				+0.5
1,092,469	+				+0.1
1,092,469	+				+0.0
1,092,469	+				-0.9
1,092,469	+				+0.3
1,092,469	+				+1.7
1,092,469	+				-0.9
1,092,469	+				+0.1
1,092,469	+				-2.0
1,092,469	+				+0.7
1,092,469	+				-0.1
1,092,469	+				-1.3
1,092,469	+				-1.9
1,092,469	+				-0.9
1,092,469	+				-0.1
1,092,469	+				+1.7
1,092,469	+				-1.7
1,092,470	-				-0.0
1,092,470	-				-0.1
1,092,470	-				-1.3
1,092,470	-				+0.1
1,092,470	-				-1.0
1,092,470	-				+0.9
1,092,470	-				+1.3
1,092,470	-				-0.9
1,092,470	-				+2.1
1,092,470	-				-1.4
1,092,470	-				-0.3
1,092,470	-				+0.0
1,092,470	-				-0.4
1,092,470	-				-1.4
1,092,470	-				+0.5
1,092,470	-				+0.2
1,092,470	-				+1.2
1,092,470	-				+2.2
1,092,470	-				-0.1
1,092,470	-				-1.1
1,092,471	+				-0.5
1,092,471	+				-0.9
1,092,471	+				-1.1
1,092,471	+				+0.0
1,092,471	+				-0.0
1,092,471	+				-0.3
1,092,471	+				+0.7
1,092,471	+				-0.4
1,092,471	+				-0.7
1,092,471	+				-2.0
1,092,471	+				-0.9
1,092,472	-				+0.5
1,092,472	-				-0.9
1,092,472	-				-0.1
1,092,472	-				+0.3
1,092,472	-				-0.3
1,092,472	-				+0.5
1,092,472	-				+1.0
1,092,472	-				-0.1
1,092,472	-				+0.7
1,092,472	-				-0.9
1,092,472	-				+0.6
1,092,472	-				+1.1
1,092,472	-				+0.7
1,092,472	-				+1.1
1,092,472	-				+1.5
1,092,472	-				-2.4
1,092,472	-				+1.1
1,092,472	-				+1.4
1,092,472	-				-0.9
1,092,472	-				+3.5
1,092,567	+				-0.7
1,092,610	+				-1.3
1,092,944	+		MPMX19_03654	0.35	-0.6
1,092,944	+		MPMX19_03654	0.35	-1.1
1,092,944	+		MPMX19_03654	0.35	-1.9
1,092,945	-		MPMX19_03654	0.35	-0.7
1,092,945	-		MPMX19_03654	0.35	-0.7
1,092,945	-		MPMX19_03654	0.35	-1.0
1,092,945	-		MPMX19_03654	0.35	+0.1
1,093,642	+				-0.4
1,093,642	+				-0.3
1,093,642	+				-0.1
1,093,642	+				+1.2
1,093,642	+				+1.0
1,093,643	-				-1.3
1,093,643	-				-1.0
1,093,643	-				+0.7
1,093,805	-				-0.6
1,093,805	-				-0.9
1,093,863	+				-0.5
1,093,864	-				-1.2
1,093,864	-				-0.9
1,093,888	+				+0.1
1,093,888	+				+0.3
1,093,888	+				-0.0
1,093,888	+				-1.3
1,093,888	+				+0.1
1,093,889	-				-0.3
1,093,889	-				+0.7
1,093,889	-				+0.1
1,093,889	-				+0.1
1,093,889	-				-0.6
1,093,889	-				-0.9
1,093,889	-				+0.0
1,093,889	-				-1.0
1,093,889	-				+0.7
1,093,889	-				+1.7
1,093,889	-				+0.1
1,093,892	+				+1.1
1,093,893	-				-0.6
1,093,940	+				-1.3
1,093,983	+				+1.3
1,093,999	-				-0.1
1,094,121	+		MPMX19_03655	0.40	+0.7
1,094,122	-		MPMX19_03655	0.41	-0.3
1,094,187	+		MPMX19_03655	0.64	+0.1
1,094,188	-		MPMX19_03655	0.64	-0.1
1,094,188	-		MPMX19_03655	0.64	-0.1
1,094,354	+		MPMX19_03656	0.11	+0.2
1,094,354	+		MPMX19_03656	0.11	+0.3
1,094,354	+		MPMX19_03656	0.11	-0.7
1,094,355	-		MPMX19_03656	0.11	+0.1
1,094,355	-		MPMX19_03656	0.11	+1.4
1,094,355	-		MPMX19_03656	0.11	+0.1
1,094,355	-		MPMX19_03656	0.11	-0.6
1,094,383	-		MPMX19_03656	0.15	+0.6
1,094,383	-		MPMX19_03656	0.15	+1.1
1,094,509	-		MPMX19_03656	0.35	-0.0
1,094,576	+		MPMX19_03656	0.45	+1.1
1,094,576	+		MPMX19_03656	0.45	+0.3
1,094,576	+		MPMX19_03656	0.45	-0.2
1,094,576	+		MPMX19_03656	0.45	-0.0
1,094,576	+		MPMX19_03656	0.45	-1.3
1,094,576	+		MPMX19_03656	0.45	-1.4
1,094,576	+		MPMX19_03656	0.45	-0.1
1,094,576	+		MPMX19_03656	0.45	+0.5
1,094,576	+		MPMX19_03656	0.45	-0.3
1,094,576	+		MPMX19_03656	0.45	-0.9
1,094,576	+		MPMX19_03656	0.45	+0.8
1,094,576	+		MPMX19_03656	0.45	-0.3
1,094,576	+		MPMX19_03656	0.45	-1.1