Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03630 and MPMX19_03631 are separated by 81 nucleotides MPMX19_03631 and MPMX19_03632 are separated by 59 nucleotides
MPMX19_03630: MPMX19_03630 - Adenine deaminase, at 1,064,729 to 1,066,690
_03630
MPMX19_03631: MPMX19_03631 - hypothetical protein, at 1,066,772 to 1,067,218
_03631
MPMX19_03632: MPMX19_03632 - Sodium, potassium, lithium and rubidium/H(+) antiporter, at 1,067,278 to 1,068,882
_03632
Position (kb)
1066
1067
1068 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1065.860 kb on + strand, within MPMX19_03630 at 1065.860 kb on + strand, within MPMX19_03630 at 1065.860 kb on + strand, within MPMX19_03630 at 1065.860 kb on + strand, within MPMX19_03630 at 1065.860 kb on + strand, within MPMX19_03630 at 1065.860 kb on + strand, within MPMX19_03630 at 1065.860 kb on + strand, within MPMX19_03630 at 1065.860 kb on + strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.861 kb on - strand, within MPMX19_03630 at 1065.991 kb on - strand, within MPMX19_03630 at 1066.028 kb on + strand, within MPMX19_03630 at 1066.028 kb on + strand, within MPMX19_03630 at 1066.028 kb on + strand, within MPMX19_03630 at 1066.028 kb on + strand, within MPMX19_03630 at 1066.028 kb on + strand, within MPMX19_03630 at 1066.029 kb on - strand, within MPMX19_03630 at 1066.029 kb on - strand, within MPMX19_03630 at 1066.029 kb on - strand, within MPMX19_03630 at 1066.029 kb on - strand, within MPMX19_03630 at 1066.040 kb on + strand, within MPMX19_03630 at 1066.041 kb on - strand, within MPMX19_03630 at 1066.041 kb on - strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.154 kb on + strand, within MPMX19_03630 at 1066.155 kb on - strand, within MPMX19_03630 at 1066.155 kb on - strand, within MPMX19_03630 at 1066.155 kb on - strand, within MPMX19_03630 at 1066.155 kb on - strand, within MPMX19_03630 at 1066.155 kb on - strand, within MPMX19_03630 at 1066.155 kb on - strand, within MPMX19_03630 at 1066.155 kb on - strand, within MPMX19_03630 at 1066.155 kb on - strand, within MPMX19_03630 at 1066.447 kb on - strand, within MPMX19_03630 at 1066.515 kb on - strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.517 kb on + strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.518 kb on - strand at 1066.616 kb on + strand at 1066.617 kb on - strand at 1066.617 kb on - strand at 1066.874 kb on + strand, within MPMX19_03631 at 1066.874 kb on + strand, within MPMX19_03631 at 1066.875 kb on - strand, within MPMX19_03631 at 1067.144 kb on - strand, within MPMX19_03631 at 1067.216 kb on + strand at 1067.477 kb on + strand, within MPMX19_03632 at 1067.477 kb on + strand, within MPMX19_03632 at 1067.478 kb on - strand, within MPMX19_03632 at 1067.491 kb on + strand, within MPMX19_03632 at 1067.491 kb on + strand, within MPMX19_03632 at 1067.491 kb on + strand, within MPMX19_03632 at 1067.491 kb on + strand, within MPMX19_03632 at 1067.492 kb on - strand, within MPMX19_03632 at 1067.492 kb on - strand, within MPMX19_03632 at 1067.597 kb on + strand, within MPMX19_03632 at 1067.597 kb on + strand, within MPMX19_03632 at 1067.597 kb on + strand, within MPMX19_03632 at 1067.597 kb on + strand, within MPMX19_03632 at 1067.597 kb on + strand, within MPMX19_03632 at 1067.597 kb on + strand, within MPMX19_03632 at 1067.597 kb on + strand, within MPMX19_03632 at 1067.597 kb on + strand, within MPMX19_03632 at 1067.597 kb on + strand, within MPMX19_03632 at 1067.598 kb on - strand, within MPMX19_03632 at 1067.598 kb on - strand, within MPMX19_03632 at 1067.598 kb on - strand, within MPMX19_03632 at 1067.598 kb on - strand, within MPMX19_03632 at 1067.598 kb on - strand, within MPMX19_03632 at 1067.598 kb on - strand, within MPMX19_03632 at 1067.598 kb on - strand, within MPMX19_03632 at 1067.959 kb on + strand, within MPMX19_03632 at 1067.959 kb on + strand, within MPMX19_03632 at 1067.959 kb on + strand, within MPMX19_03632 at 1067.959 kb on + strand, within MPMX19_03632 at 1067.959 kb on + strand, within MPMX19_03632 at 1067.959 kb on + strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632 at 1067.960 kb on - strand, within MPMX19_03632
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,065,860 + MPMX19_03630 0.58 -0.3 1,065,860 + MPMX19_03630 0.58 -1.1 1,065,860 + MPMX19_03630 0.58 -1.3 1,065,860 + MPMX19_03630 0.58 -0.5 1,065,860 + MPMX19_03630 0.58 +0.1 1,065,860 + MPMX19_03630 0.58 -0.6 1,065,860 + MPMX19_03630 0.58 -1.9 1,065,860 + MPMX19_03630 0.58 +0.7 1,065,861 - MPMX19_03630 0.58 +0.1 1,065,861 - MPMX19_03630 0.58 -0.0 1,065,861 - MPMX19_03630 0.58 -0.3 1,065,861 - MPMX19_03630 0.58 +0.0 1,065,861 - MPMX19_03630 0.58 -0.6 1,065,861 - MPMX19_03630 0.58 +1.0 1,065,861 - MPMX19_03630 0.58 +0.1 1,065,861 - MPMX19_03630 0.58 +0.5 1,065,861 - MPMX19_03630 0.58 +0.0 1,065,861 - MPMX19_03630 0.58 +0.1 1,065,861 - MPMX19_03630 0.58 -0.0 1,065,991 - MPMX19_03630 0.64 +2.1 1,066,028 + MPMX19_03630 0.66 +0.9 1,066,028 + MPMX19_03630 0.66 +0.6 1,066,028 + MPMX19_03630 0.66 -0.3 1,066,028 + MPMX19_03630 0.66 -1.0 1,066,028 + MPMX19_03630 0.66 +0.4 1,066,029 - MPMX19_03630 0.66 -0.2 1,066,029 - MPMX19_03630 0.66 +0.5 1,066,029 - MPMX19_03630 0.66 -0.1 1,066,029 - MPMX19_03630 0.66 -0.9 1,066,040 + MPMX19_03630 0.67 +0.3 1,066,041 - MPMX19_03630 0.67 -0.1 1,066,041 - MPMX19_03630 0.67 +0.3 1,066,154 + MPMX19_03630 0.73 -0.8 1,066,154 + MPMX19_03630 0.73 -0.1 1,066,154 + MPMX19_03630 0.73 -1.7 1,066,154 + MPMX19_03630 0.73 -0.4 1,066,154 + MPMX19_03630 0.73 -1.3 1,066,154 + MPMX19_03630 0.73 -1.7 1,066,154 + MPMX19_03630 0.73 +0.9 1,066,154 + MPMX19_03630 0.73 -1.7 1,066,154 + MPMX19_03630 0.73 +0.8 1,066,154 + MPMX19_03630 0.73 +0.4 1,066,154 + MPMX19_03630 0.73 -0.9 1,066,154 + MPMX19_03630 0.73 -1.9 1,066,155 - MPMX19_03630 0.73 -2.2 1,066,155 - MPMX19_03630 0.73 +0.6 1,066,155 - MPMX19_03630 0.73 +0.1 1,066,155 - MPMX19_03630 0.73 -1.6 1,066,155 - MPMX19_03630 0.73 -0.2 1,066,155 - MPMX19_03630 0.73 -1.3 1,066,155 - MPMX19_03630 0.73 -1.3 1,066,155 - MPMX19_03630 0.73 -0.2 1,066,447 - MPMX19_03630 0.88 +0.8 1,066,515 - +1.3 1,066,517 + -0.0 1,066,517 + -0.4 1,066,517 + -0.6 1,066,517 + -1.4 1,066,517 + -0.7 1,066,517 + -0.6 1,066,517 + -0.8 1,066,517 + -0.1 1,066,517 + -0.7 1,066,517 + -0.4 1,066,517 + -0.7 1,066,518 - -2.4 1,066,518 - +0.7 1,066,518 - +0.3 1,066,518 - -1.6 1,066,518 - +0.4 1,066,518 - -0.3 1,066,518 - +0.8 1,066,518 - +0.3 1,066,518 - +0.3 1,066,518 - -1.1 1,066,518 - +0.4 1,066,518 - -1.6 1,066,518 - -0.1 1,066,518 - +2.1 1,066,518 - +0.4 1,066,518 - -0.4 1,066,518 - +1.2 1,066,518 - -0.6 1,066,518 - +0.1 1,066,518 - -0.0 1,066,616 + -0.3 1,066,617 - -0.9 1,066,617 - -2.2 1,066,874 + MPMX19_03631 0.23 +1.0 1,066,874 + MPMX19_03631 0.23 -0.3 1,066,875 - MPMX19_03631 0.23 +1.1 1,067,144 - MPMX19_03631 0.83 +0.3 1,067,216 + +2.0 1,067,477 + MPMX19_03632 0.12 -0.6 1,067,477 + MPMX19_03632 0.12 -0.1 1,067,478 - MPMX19_03632 0.12 +0.7 1,067,491 + MPMX19_03632 0.13 -0.9 1,067,491 + MPMX19_03632 0.13 -1.4 1,067,491 + MPMX19_03632 0.13 -0.1 1,067,491 + MPMX19_03632 0.13 -0.3 1,067,492 - MPMX19_03632 0.13 -1.3 1,067,492 - MPMX19_03632 0.13 +0.5 1,067,597 + MPMX19_03632 0.20 -0.7 1,067,597 + MPMX19_03632 0.20 +1.2 1,067,597 + MPMX19_03632 0.20 -0.9 1,067,597 + MPMX19_03632 0.20 +0.5 1,067,597 + MPMX19_03632 0.20 +0.1 1,067,597 + MPMX19_03632 0.20 -0.8 1,067,597 + MPMX19_03632 0.20 +0.3 1,067,597 + MPMX19_03632 0.20 -0.4 1,067,597 + MPMX19_03632 0.20 -0.5 1,067,598 - MPMX19_03632 0.20 -0.6 1,067,598 - MPMX19_03632 0.20 -0.1 1,067,598 - MPMX19_03632 0.20 -0.4 1,067,598 - MPMX19_03632 0.20 -0.3 1,067,598 - MPMX19_03632 0.20 -0.3 1,067,598 - MPMX19_03632 0.20 +0.1 1,067,598 - MPMX19_03632 0.20 +1.1 1,067,959 + MPMX19_03632 0.42 +0.2 1,067,959 + MPMX19_03632 0.42 +0.3 1,067,959 + MPMX19_03632 0.42 -0.4 1,067,959 + MPMX19_03632 0.42 +0.4 1,067,959 + MPMX19_03632 0.42 -0.3 1,067,959 + MPMX19_03632 0.42 -0.5 1,067,960 - MPMX19_03632 0.42 -0.1 1,067,960 - MPMX19_03632 0.42 +0.3 1,067,960 - MPMX19_03632 0.42 +0.1 1,067,960 - MPMX19_03632 0.42 -0.4 1,067,960 - MPMX19_03632 0.42 -0.0 1,067,960 - MPMX19_03632 0.42 -1.0 1,067,960 - MPMX19_03632 0.42 -1.3 1,067,960 - MPMX19_03632 0.42 -0.7 1,067,960 - MPMX19_03632 0.42 -0.2 1,067,960 - MPMX19_03632 0.42 -1.1 1,067,960 - MPMX19_03632 0.42 +0.5
Or see this region's nucleotide sequence