Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03617 and MPMX19_03618 are separated by 350 nucleotides MPMX19_03618 and MPMX19_03619 overlap by 4 nucleotides
MPMX19_03617: MPMX19_03617 - hypothetical protein, at 1,049,004 to 1,049,705
_03617
MPMX19_03618: MPMX19_03618 - hypothetical protein, at 1,050,056 to 1,050,964
_03618
MPMX19_03619: MPMX19_03619 - hypothetical protein, at 1,050,961 to 1,052,385
_03619
Position (kb)
1050
1051 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1049.185 kb on + strand, within MPMX19_03617 at 1049.185 kb on + strand, within MPMX19_03617 at 1049.185 kb on + strand, within MPMX19_03617 at 1049.186 kb on - strand, within MPMX19_03617 at 1049.186 kb on - strand, within MPMX19_03617 at 1049.186 kb on - strand, within MPMX19_03617 at 1049.186 kb on - strand, within MPMX19_03617 at 1049.186 kb on - strand, within MPMX19_03617 at 1049.186 kb on - strand, within MPMX19_03617 at 1049.599 kb on + strand, within MPMX19_03617 at 1049.599 kb on + strand, within MPMX19_03617 at 1049.599 kb on + strand, within MPMX19_03617 at 1049.599 kb on + strand, within MPMX19_03617 at 1049.600 kb on - strand, within MPMX19_03617 at 1049.600 kb on - strand, within MPMX19_03617 at 1049.600 kb on - strand, within MPMX19_03617 at 1049.600 kb on - strand, within MPMX19_03617 at 1049.841 kb on + strand at 1049.863 kb on - strand at 1049.863 kb on - strand at 1049.863 kb on - strand at 1049.863 kb on - strand at 1049.992 kb on + strand at 1049.992 kb on + strand at 1049.993 kb on - strand at 1049.993 kb on - strand at 1050.227 kb on + strand, within MPMX19_03618 at 1050.227 kb on + strand, within MPMX19_03618 at 1050.227 kb on + strand, within MPMX19_03618 at 1050.227 kb on + strand, within MPMX19_03618 at 1050.227 kb on + strand, within MPMX19_03618 at 1050.227 kb on + strand, within MPMX19_03618 at 1050.227 kb on + strand, within MPMX19_03618 at 1050.227 kb on + strand, within MPMX19_03618 at 1050.228 kb on - strand, within MPMX19_03618 at 1050.228 kb on - strand, within MPMX19_03618 at 1050.228 kb on - strand, within MPMX19_03618 at 1050.228 kb on - strand, within MPMX19_03618 at 1050.228 kb on - strand, within MPMX19_03618 at 1050.228 kb on - strand, within MPMX19_03618 at 1050.638 kb on + strand, within MPMX19_03618 at 1050.639 kb on - strand, within MPMX19_03618 at 1050.641 kb on + strand, within MPMX19_03618 at 1050.641 kb on + strand, within MPMX19_03618 at 1050.642 kb on - strand, within MPMX19_03618 at 1050.642 kb on - strand, within MPMX19_03618 at 1050.642 kb on - strand, within MPMX19_03618 at 1050.642 kb on - strand, within MPMX19_03618 at 1050.642 kb on - strand, within MPMX19_03618 at 1050.887 kb on + strand at 1050.887 kb on + strand at 1050.887 kb on + strand at 1050.887 kb on + strand at 1050.888 kb on - strand at 1050.893 kb on + strand at 1050.893 kb on + strand at 1050.893 kb on + strand at 1050.893 kb on + strand at 1050.893 kb on + strand at 1050.893 kb on + strand at 1050.894 kb on - strand at 1050.894 kb on - strand at 1050.894 kb on - strand at 1051.124 kb on + strand, within MPMX19_03619 at 1051.125 kb on - strand, within MPMX19_03619 at 1051.132 kb on - strand, within MPMX19_03619 at 1051.378 kb on - strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.747 kb on + strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619 at 1051.748 kb on - strand, within MPMX19_03619
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,049,185 + MPMX19_03617 0.26 +1.0 1,049,185 + MPMX19_03617 0.26 -0.1 1,049,185 + MPMX19_03617 0.26 -0.4 1,049,186 - MPMX19_03617 0.26 -0.7 1,049,186 - MPMX19_03617 0.26 -1.9 1,049,186 - MPMX19_03617 0.26 +1.3 1,049,186 - MPMX19_03617 0.26 +0.9 1,049,186 - MPMX19_03617 0.26 +0.0 1,049,186 - MPMX19_03617 0.26 -0.1 1,049,599 + MPMX19_03617 0.85 -0.8 1,049,599 + MPMX19_03617 0.85 +1.1 1,049,599 + MPMX19_03617 0.85 +0.7 1,049,599 + MPMX19_03617 0.85 -0.9 1,049,600 - MPMX19_03617 0.85 -1.1 1,049,600 - MPMX19_03617 0.85 +0.6 1,049,600 - MPMX19_03617 0.85 +0.7 1,049,600 - MPMX19_03617 0.85 -0.4 1,049,841 + -0.0 1,049,863 - -0.9 1,049,863 - -1.0 1,049,863 - -1.3 1,049,863 - -1.4 1,049,992 + +2.1 1,049,992 + +0.6 1,049,993 - -0.7 1,049,993 - -0.7 1,050,227 + MPMX19_03618 0.19 +0.4 1,050,227 + MPMX19_03618 0.19 -1.1 1,050,227 + MPMX19_03618 0.19 -0.3 1,050,227 + MPMX19_03618 0.19 +0.1 1,050,227 + MPMX19_03618 0.19 -0.1 1,050,227 + MPMX19_03618 0.19 -0.7 1,050,227 + MPMX19_03618 0.19 -0.5 1,050,227 + MPMX19_03618 0.19 -0.3 1,050,228 - MPMX19_03618 0.19 +0.4 1,050,228 - MPMX19_03618 0.19 +0.1 1,050,228 - MPMX19_03618 0.19 -0.9 1,050,228 - MPMX19_03618 0.19 +0.1 1,050,228 - MPMX19_03618 0.19 -0.3 1,050,228 - MPMX19_03618 0.19 -0.6 1,050,638 + MPMX19_03618 0.64 -0.7 1,050,639 - MPMX19_03618 0.64 -1.6 1,050,641 + MPMX19_03618 0.64 -0.7 1,050,641 + MPMX19_03618 0.64 -0.7 1,050,642 - MPMX19_03618 0.64 -0.9 1,050,642 - MPMX19_03618 0.64 -0.7 1,050,642 - MPMX19_03618 0.64 -0.2 1,050,642 - MPMX19_03618 0.64 -0.9 1,050,642 - MPMX19_03618 0.64 -0.3 1,050,887 + -0.2 1,050,887 + +0.6 1,050,887 + -0.1 1,050,887 + -0.5 1,050,888 - -1.1 1,050,893 + -0.2 1,050,893 + -0.1 1,050,893 + -0.4 1,050,893 + -0.1 1,050,893 + -1.7 1,050,893 + -1.5 1,050,894 - -0.9 1,050,894 - -0.1 1,050,894 - -0.2 1,051,124 + MPMX19_03619 0.11 -0.1 1,051,125 - MPMX19_03619 0.12 -1.4 1,051,132 - MPMX19_03619 0.12 +0.4 1,051,378 - MPMX19_03619 0.29 +0.5 1,051,747 + MPMX19_03619 0.55 +0.7 1,051,747 + MPMX19_03619 0.55 -0.9 1,051,747 + MPMX19_03619 0.55 -0.1 1,051,747 + MPMX19_03619 0.55 -0.8 1,051,747 + MPMX19_03619 0.55 -0.9 1,051,747 + MPMX19_03619 0.55 -1.2 1,051,747 + MPMX19_03619 0.55 -1.2 1,051,747 + MPMX19_03619 0.55 +0.4 1,051,747 + MPMX19_03619 0.55 +0.7 1,051,747 + MPMX19_03619 0.55 -1.5 1,051,747 + MPMX19_03619 0.55 +1.2 1,051,747 + MPMX19_03619 0.55 +1.1 1,051,748 - MPMX19_03619 0.55 -1.4 1,051,748 - MPMX19_03619 0.55 -0.9 1,051,748 - MPMX19_03619 0.55 -0.3 1,051,748 - MPMX19_03619 0.55 +0.1 1,051,748 - MPMX19_03619 0.55 -1.2 1,051,748 - MPMX19_03619 0.55 -0.6 1,051,748 - MPMX19_03619 0.55 -0.4 1,051,748 - MPMX19_03619 0.55 -1.3 1,051,748 - MPMX19_03619 0.55 -1.5 1,051,748 - MPMX19_03619 0.55 -1.2 1,051,748 - MPMX19_03619 0.55 -2.0 1,051,748 - MPMX19_03619 0.55 +1.3 1,051,748 - MPMX19_03619 0.55 +0.0
Or see this region's nucleotide sequence