Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03491 and MPMX19_03492 are separated by 289 nucleotides MPMX19_03492 and MPMX19_03493 are separated by 285 nucleotides
MPMX19_03491: MPMX19_03491 - putative FAD-linked oxidoreductase, at 904,483 to 905,904
_03491
MPMX19_03492: MPMX19_03492 - 3'-5' exonuclease DinG, at 906,194 to 907,132
_03492
MPMX19_03493: MPMX19_03493 - hypothetical protein, at 907,418 to 909,121
_03493
Position (kb) 906
907
908 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 905.336 kb on + strand, within MPMX19_03491 at 905.363 kb on + strand, within MPMX19_03491 at 905.363 kb on + strand, within MPMX19_03491 at 905.519 kb on + strand, within MPMX19_03491 at 905.926 kb on + strand at 905.926 kb on + strand at 905.926 kb on + strand at 905.926 kb on + strand at 905.927 kb on - strand at 905.927 kb on - strand at 905.927 kb on - strand at 905.927 kb on - strand at 905.968 kb on + strand at 905.969 kb on - strand at 906.011 kb on + strand at 906.011 kb on + strand at 906.012 kb on - strand at 906.012 kb on - strand at 906.012 kb on - strand at 906.140 kb on + strand at 906.211 kb on + strand at 906.211 kb on + strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.879 kb on - strand, within MPMX19_03492 at 906.879 kb on - strand, within MPMX19_03492 at 906.879 kb on - strand, within MPMX19_03492 at 906.989 kb on + strand, within MPMX19_03492 at 906.989 kb on + strand, within MPMX19_03492 at 906.989 kb on + strand, within MPMX19_03492 at 906.989 kb on + strand, within MPMX19_03492 at 906.989 kb on + strand, within MPMX19_03492 at 906.989 kb on + strand, within MPMX19_03492 at 906.989 kb on + strand, within MPMX19_03492 at 906.990 kb on - strand, within MPMX19_03492 at 906.990 kb on - strand, within MPMX19_03492 at 906.990 kb on - strand, within MPMX19_03492 at 906.990 kb on - strand, within MPMX19_03492 at 907.055 kb on + strand at 907.055 kb on + strand at 907.055 kb on + strand at 907.056 kb on - strand at 907.056 kb on - strand at 907.185 kb on + strand at 907.185 kb on + strand at 907.185 kb on + strand at 907.185 kb on + strand at 907.185 kb on + strand at 907.185 kb on + strand at 907.185 kb on + strand at 907.185 kb on + strand at 907.185 kb on + strand at 907.186 kb on - strand at 907.186 kb on - strand at 907.186 kb on - strand at 907.186 kb on - strand at 907.186 kb on - strand at 907.186 kb on - strand at 907.186 kb on - strand at 907.186 kb on - strand at 907.368 kb on + strand at 907.368 kb on + strand at 907.369 kb on - strand at 907.369 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 905,336 + MPMX19_03491 0.60 +0.7 905,363 + MPMX19_03491 0.62 -0.6 905,363 + MPMX19_03491 0.62 -1.2 905,519 + MPMX19_03491 0.73 -0.7 905,926 + +0.1 905,926 + +1.3 905,926 + -0.5 905,926 + -0.4 905,927 - +0.9 905,927 - -0.9 905,927 - -0.3 905,927 - -0.2 905,968 + +0.3 905,969 - +0.1 906,011 + -1.6 906,011 + -0.1 906,012 - -0.0 906,012 - -0.7 906,012 - -0.6 906,140 + -2.9 906,211 + -0.9 906,211 + -0.9 906,212 - -0.3 906,212 - -0.1 906,212 - -0.9 906,212 - -1.2 906,212 - -0.4 906,212 - -0.6 906,879 - MPMX19_03492 0.73 -0.5 906,879 - MPMX19_03492 0.73 -0.4 906,879 - MPMX19_03492 0.73 -0.3 906,989 + MPMX19_03492 0.85 -0.3 906,989 + MPMX19_03492 0.85 -0.9 906,989 + MPMX19_03492 0.85 -2.6 906,989 + MPMX19_03492 0.85 -0.1 906,989 + MPMX19_03492 0.85 -0.9 906,989 + MPMX19_03492 0.85 -1.6 906,989 + MPMX19_03492 0.85 +0.3 906,990 - MPMX19_03492 0.85 -0.6 906,990 - MPMX19_03492 0.85 -0.4 906,990 - MPMX19_03492 0.85 +0.1 906,990 - MPMX19_03492 0.85 +0.1 907,055 + -0.1 907,055 + -0.3 907,055 + +0.1 907,056 - +0.4 907,056 - +0.1 907,185 + +0.9 907,185 + -0.2 907,185 + -0.4 907,185 + +0.7 907,185 + -0.9 907,185 + +0.7 907,185 + -0.4 907,185 + +0.6 907,185 + -0.7 907,186 - +0.5 907,186 - -0.3 907,186 - -1.2 907,186 - -2.4 907,186 - -1.4 907,186 - -1.3 907,186 - -0.1 907,186 - +1.3 907,368 + -0.7 907,368 + +0.2 907,369 - -1.3 907,369 - -0.3
Or see this region's nucleotide sequence