Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03465 and MPMX19_03466 are separated by 26 nucleotides MPMX19_03466 and MPMX19_03467 are separated by 74 nucleotides
MPMX19_03465: MPMX19_03465 - Acetyl-CoA acetyltransferase, at 875,211 to 876,386
_03465
MPMX19_03466: MPMX19_03466 - hypothetical protein, at 876,413 to 876,685
_03466
MPMX19_03467: MPMX19_03467 - Methyl-accepting chemotaxis protein, at 876,760 to 878,451
_03467
Position (kb)
876
877 Strain fitness (log2 ratio)
-2
-1
0
1 at 875.670 kb on + strand, within MPMX19_03465 at 875.670 kb on + strand, within MPMX19_03465 at 875.670 kb on + strand, within MPMX19_03465 at 875.670 kb on + strand, within MPMX19_03465 at 875.670 kb on + strand, within MPMX19_03465 at 875.670 kb on + strand, within MPMX19_03465 at 875.670 kb on + strand, within MPMX19_03465 at 875.670 kb on + strand, within MPMX19_03465 at 875.671 kb on - strand, within MPMX19_03465 at 875.671 kb on - strand, within MPMX19_03465 at 875.671 kb on - strand, within MPMX19_03465 at 875.671 kb on - strand, within MPMX19_03465 at 875.671 kb on - strand, within MPMX19_03465 at 875.671 kb on - strand, within MPMX19_03465 at 876.448 kb on + strand, within MPMX19_03466 at 876.449 kb on - strand, within MPMX19_03466 at 876.449 kb on - strand, within MPMX19_03466 at 876.449 kb on - strand, within MPMX19_03466 at 876.449 kb on - strand, within MPMX19_03466 at 876.463 kb on + strand, within MPMX19_03466 at 876.464 kb on - strand, within MPMX19_03466 at 876.464 kb on - strand, within MPMX19_03466 at 876.466 kb on + strand, within MPMX19_03466 at 876.466 kb on + strand, within MPMX19_03466 at 876.466 kb on + strand, within MPMX19_03466 at 876.466 kb on + strand, within MPMX19_03466 at 876.466 kb on + strand, within MPMX19_03466 at 876.466 kb on + strand, within MPMX19_03466 at 876.466 kb on + strand, within MPMX19_03466 at 876.467 kb on - strand, within MPMX19_03466 at 876.467 kb on - strand, within MPMX19_03466 at 876.467 kb on - strand, within MPMX19_03466 at 876.467 kb on - strand, within MPMX19_03466 at 876.467 kb on - strand, within MPMX19_03466 at 876.470 kb on - strand, within MPMX19_03466 at 876.470 kb on - strand, within MPMX19_03466 at 876.470 kb on - strand, within MPMX19_03466 at 876.470 kb on - strand, within MPMX19_03466 at 876.683 kb on + strand at 876.755 kb on + strand at 876.755 kb on + strand at 876.755 kb on + strand at 876.755 kb on + strand at 876.755 kb on + strand at 876.755 kb on + strand at 876.755 kb on + strand at 876.755 kb on + strand at 876.755 kb on + strand at 876.755 kb on + strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 876.756 kb on - strand at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.033 kb on + strand, within MPMX19_03467 at 877.034 kb on - strand, within MPMX19_03467 at 877.034 kb on - strand, within MPMX19_03467 at 877.034 kb on - strand, within MPMX19_03467 at 877.034 kb on - strand, within MPMX19_03467 at 877.034 kb on - strand, within MPMX19_03467 at 877.034 kb on - strand, within MPMX19_03467 at 877.034 kb on - strand, within MPMX19_03467 at 877.034 kb on - strand, within MPMX19_03467 at 877.132 kb on + strand, within MPMX19_03467 at 877.132 kb on + strand, within MPMX19_03467 at 877.132 kb on + strand, within MPMX19_03467 at 877.132 kb on + strand, within MPMX19_03467 at 877.132 kb on + strand, within MPMX19_03467 at 877.132 kb on + strand, within MPMX19_03467 at 877.132 kb on + strand, within MPMX19_03467 at 877.132 kb on + strand, within MPMX19_03467 at 877.132 kb on + strand, within MPMX19_03467 at 877.133 kb on - strand, within MPMX19_03467 at 877.133 kb on - strand, within MPMX19_03467 at 877.133 kb on - strand, within MPMX19_03467 at 877.133 kb on - strand, within MPMX19_03467 at 877.133 kb on - strand, within MPMX19_03467 at 877.133 kb on - strand, within MPMX19_03467 at 877.133 kb on - strand, within MPMX19_03467 at 877.133 kb on - strand, within MPMX19_03467 at 877.189 kb on + strand, within MPMX19_03467 at 877.189 kb on + strand, within MPMX19_03467 at 877.189 kb on + strand, within MPMX19_03467 at 877.189 kb on + strand, within MPMX19_03467 at 877.189 kb on + strand, within MPMX19_03467 at 877.189 kb on + strand, within MPMX19_03467 at 877.189 kb on + strand, within MPMX19_03467 at 877.190 kb on - strand, within MPMX19_03467 at 877.190 kb on - strand, within MPMX19_03467 at 877.190 kb on - strand, within MPMX19_03467 at 877.190 kb on - strand, within MPMX19_03467 at 877.190 kb on - strand, within MPMX19_03467 at 877.190 kb on - strand, within MPMX19_03467 at 877.190 kb on - strand, within MPMX19_03467 at 877.228 kb on + strand, within MPMX19_03467 at 877.228 kb on + strand, within MPMX19_03467 at 877.228 kb on + strand, within MPMX19_03467 at 877.228 kb on + strand, within MPMX19_03467 at 877.229 kb on - strand, within MPMX19_03467 at 877.229 kb on - strand, within MPMX19_03467 at 877.229 kb on - strand, within MPMX19_03467 at 877.229 kb on - strand, within MPMX19_03467 at 877.229 kb on - strand, within MPMX19_03467 at 877.229 kb on - strand, within MPMX19_03467 at 877.244 kb on - strand, within MPMX19_03467 at 877.244 kb on - strand, within MPMX19_03467 at 877.244 kb on - strand, within MPMX19_03467 at 877.244 kb on - strand, within MPMX19_03467 at 877.244 kb on - strand, within MPMX19_03467 at 877.291 kb on + strand, within MPMX19_03467 at 877.291 kb on + strand, within MPMX19_03467 at 877.292 kb on - strand, within MPMX19_03467 at 877.292 kb on - strand, within MPMX19_03467
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 875,670 + MPMX19_03465 0.39 -0.2 875,670 + MPMX19_03465 0.39 -0.5 875,670 + MPMX19_03465 0.39 -1.0 875,670 + MPMX19_03465 0.39 -0.6 875,670 + MPMX19_03465 0.39 -0.9 875,670 + MPMX19_03465 0.39 +0.1 875,670 + MPMX19_03465 0.39 -0.0 875,670 + MPMX19_03465 0.39 -2.4 875,671 - MPMX19_03465 0.39 +0.5 875,671 - MPMX19_03465 0.39 -0.3 875,671 - MPMX19_03465 0.39 -1.3 875,671 - MPMX19_03465 0.39 +0.6 875,671 - MPMX19_03465 0.39 +0.1 875,671 - MPMX19_03465 0.39 +1.1 876,448 + MPMX19_03466 0.13 -0.6 876,449 - MPMX19_03466 0.13 +0.1 876,449 - MPMX19_03466 0.13 -0.3 876,449 - MPMX19_03466 0.13 -0.5 876,449 - MPMX19_03466 0.13 -0.4 876,463 + MPMX19_03466 0.18 -0.9 876,464 - MPMX19_03466 0.19 -0.1 876,464 - MPMX19_03466 0.19 -1.2 876,466 + MPMX19_03466 0.19 -1.5 876,466 + MPMX19_03466 0.19 -0.4 876,466 + MPMX19_03466 0.19 -0.7 876,466 + MPMX19_03466 0.19 -0.9 876,466 + MPMX19_03466 0.19 -1.6 876,466 + MPMX19_03466 0.19 -0.3 876,466 + MPMX19_03466 0.19 -1.4 876,467 - MPMX19_03466 0.20 -0.3 876,467 - MPMX19_03466 0.20 -1.4 876,467 - MPMX19_03466 0.20 -0.9 876,467 - MPMX19_03466 0.20 -1.1 876,467 - MPMX19_03466 0.20 -0.5 876,470 - MPMX19_03466 0.21 -0.0 876,470 - MPMX19_03466 0.21 +0.3 876,470 - MPMX19_03466 0.21 -0.1 876,470 - MPMX19_03466 0.21 -0.7 876,683 + +1.1 876,755 + +0.4 876,755 + -0.9 876,755 + +0.0 876,755 + +0.0 876,755 + +0.7 876,755 + +0.1 876,755 + -0.3 876,755 + -0.7 876,755 + -1.4 876,755 + -1.1 876,756 - -0.6 876,756 - -0.5 876,756 - +0.6 876,756 - -1.2 876,756 - +0.7 876,756 - -1.1 876,756 - -1.0 876,756 - +0.6 876,756 - -0.5 876,756 - -0.6 876,756 - -0.7 876,756 - -0.6 876,756 - +0.0 877,033 + MPMX19_03467 0.16 -1.1 877,033 + MPMX19_03467 0.16 -0.9 877,033 + MPMX19_03467 0.16 -0.0 877,033 + MPMX19_03467 0.16 +0.7 877,033 + MPMX19_03467 0.16 -0.8 877,033 + MPMX19_03467 0.16 -2.0 877,033 + MPMX19_03467 0.16 -0.6 877,033 + MPMX19_03467 0.16 -0.3 877,033 + MPMX19_03467 0.16 -1.9 877,033 + MPMX19_03467 0.16 -0.1 877,033 + MPMX19_03467 0.16 -0.0 877,033 + MPMX19_03467 0.16 -0.1 877,033 + MPMX19_03467 0.16 -0.2 877,034 - MPMX19_03467 0.16 +1.0 877,034 - MPMX19_03467 0.16 -0.1 877,034 - MPMX19_03467 0.16 -1.3 877,034 - MPMX19_03467 0.16 -1.6 877,034 - MPMX19_03467 0.16 -0.8 877,034 - MPMX19_03467 0.16 -2.0 877,034 - MPMX19_03467 0.16 -1.5 877,034 - MPMX19_03467 0.16 -1.6 877,132 + MPMX19_03467 0.22 +0.9 877,132 + MPMX19_03467 0.22 +0.5 877,132 + MPMX19_03467 0.22 +0.4 877,132 + MPMX19_03467 0.22 -1.2 877,132 + MPMX19_03467 0.22 +0.0 877,132 + MPMX19_03467 0.22 -0.4 877,132 + MPMX19_03467 0.22 -1.3 877,132 + MPMX19_03467 0.22 -1.4 877,132 + MPMX19_03467 0.22 -1.3 877,133 - MPMX19_03467 0.22 -0.3 877,133 - MPMX19_03467 0.22 -0.3 877,133 - MPMX19_03467 0.22 -0.3 877,133 - MPMX19_03467 0.22 -0.7 877,133 - MPMX19_03467 0.22 +0.0 877,133 - MPMX19_03467 0.22 -2.0 877,133 - MPMX19_03467 0.22 -0.1 877,133 - MPMX19_03467 0.22 -0.1 877,189 + MPMX19_03467 0.25 -2.1 877,189 + MPMX19_03467 0.25 +0.6 877,189 + MPMX19_03467 0.25 +0.3 877,189 + MPMX19_03467 0.25 +0.2 877,189 + MPMX19_03467 0.25 -1.0 877,189 + MPMX19_03467 0.25 -1.0 877,189 + MPMX19_03467 0.25 -0.7 877,190 - MPMX19_03467 0.25 -0.7 877,190 - MPMX19_03467 0.25 -1.1 877,190 - MPMX19_03467 0.25 -1.9 877,190 - MPMX19_03467 0.25 -2.1 877,190 - MPMX19_03467 0.25 -0.6 877,190 - MPMX19_03467 0.25 +0.5 877,190 - MPMX19_03467 0.25 -0.4 877,228 + MPMX19_03467 0.28 +0.1 877,228 + MPMX19_03467 0.28 -0.8 877,228 + MPMX19_03467 0.28 +0.7 877,228 + MPMX19_03467 0.28 +0.4 877,229 - MPMX19_03467 0.28 -0.2 877,229 - MPMX19_03467 0.28 -0.4 877,229 - MPMX19_03467 0.28 -0.4 877,229 - MPMX19_03467 0.28 +0.3 877,229 - MPMX19_03467 0.28 -0.7 877,229 - MPMX19_03467 0.28 -0.9 877,244 - MPMX19_03467 0.29 -1.1 877,244 - MPMX19_03467 0.29 -1.4 877,244 - MPMX19_03467 0.29 +0.5 877,244 - MPMX19_03467 0.29 -0.0 877,244 - MPMX19_03467 0.29 -0.9 877,291 + MPMX19_03467 0.31 -1.9 877,291 + MPMX19_03467 0.31 -0.6 877,292 - MPMX19_03467 0.31 -0.3 877,292 - MPMX19_03467 0.31 +0.4
Or see this region's nucleotide sequence