Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03372 and MPMX19_03373 are separated by 46 nucleotides MPMX19_03373 and MPMX19_03374 overlap by 4 nucleotides
MPMX19_03372: MPMX19_03372 - hypothetical protein, at 746,921 to 750,010
_03372
MPMX19_03373: MPMX19_03373 - Type I secretion system membrane fusion protein PrsE, at 750,057 to 751,460
_03373
MPMX19_03374: MPMX19_03374 - Alpha-hemolysin translocation ATP-binding protein HlyB, at 751,457 to 753,139
_03374
Position (kb)
750
751
752 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 749.085 kb on + strand, within MPMX19_03372 at 749.331 kb on + strand, within MPMX19_03372 at 749.331 kb on + strand, within MPMX19_03372 at 749.331 kb on + strand, within MPMX19_03372 at 749.331 kb on + strand, within MPMX19_03372 at 749.331 kb on + strand, within MPMX19_03372 at 749.331 kb on + strand, within MPMX19_03372 at 749.331 kb on + strand, within MPMX19_03372 at 749.332 kb on - strand, within MPMX19_03372 at 749.332 kb on - strand, within MPMX19_03372 at 749.332 kb on - strand, within MPMX19_03372 at 749.332 kb on - strand, within MPMX19_03372 at 749.332 kb on - strand, within MPMX19_03372 at 749.332 kb on - strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.463 kb on + strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.464 kb on - strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.589 kb on + strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 749.590 kb on - strand, within MPMX19_03372 at 750.033 kb on + strand at 750.033 kb on + strand at 750.033 kb on + strand at 750.033 kb on + strand at 750.033 kb on + strand at 750.033 kb on + strand at 750.033 kb on + strand at 750.033 kb on + strand at 750.034 kb on - strand at 750.034 kb on - strand at 750.034 kb on - strand at 750.034 kb on - strand at 750.034 kb on - strand at 750.034 kb on - strand at 750.034 kb on - strand at 750.034 kb on - strand at 750.109 kb on + strand at 750.109 kb on + strand at 750.109 kb on + strand at 750.109 kb on + strand at 750.109 kb on + strand at 750.109 kb on + strand at 750.109 kb on + strand at 750.109 kb on + strand at 750.110 kb on - strand at 750.110 kb on - strand at 750.110 kb on - strand at 750.110 kb on - strand at 750.175 kb on + strand at 750.175 kb on + strand at 750.175 kb on + strand at 750.175 kb on + strand at 750.176 kb on - strand at 750.176 kb on - strand at 750.191 kb on - strand at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.229 kb on + strand, within MPMX19_03373 at 750.230 kb on - strand, within MPMX19_03373 at 750.230 kb on - strand, within MPMX19_03373 at 750.230 kb on - strand, within MPMX19_03373 at 750.230 kb on - strand, within MPMX19_03373 at 750.230 kb on - strand, within MPMX19_03373 at 750.230 kb on - strand, within MPMX19_03373 at 750.230 kb on - strand, within MPMX19_03373 at 750.232 kb on + strand, within MPMX19_03373 at 750.232 kb on + strand, within MPMX19_03373 at 750.232 kb on + strand, within MPMX19_03373 at 750.232 kb on + strand, within MPMX19_03373 at 750.233 kb on - strand, within MPMX19_03373 at 750.233 kb on - strand, within MPMX19_03373 at 750.293 kb on + strand, within MPMX19_03373 at 750.293 kb on + strand, within MPMX19_03373 at 750.293 kb on + strand, within MPMX19_03373 at 750.358 kb on + strand, within MPMX19_03373 at 750.358 kb on + strand, within MPMX19_03373 at 750.359 kb on - strand, within MPMX19_03373 at 750.359 kb on - strand, within MPMX19_03373 at 750.359 kb on - strand, within MPMX19_03373 at 750.533 kb on - strand, within MPMX19_03373 at 750.608 kb on - strand, within MPMX19_03373 at 751.189 kb on + strand, within MPMX19_03373 at 751.189 kb on + strand, within MPMX19_03373 at 751.189 kb on + strand, within MPMX19_03373 at 751.190 kb on - strand, within MPMX19_03373 at 751.190 kb on - strand, within MPMX19_03373 at 751.190 kb on - strand, within MPMX19_03373 at 751.190 kb on - strand, within MPMX19_03373 at 751.190 kb on - strand, within MPMX19_03373 at 751.190 kb on - strand, within MPMX19_03373 at 751.190 kb on - strand, within MPMX19_03373 at 751.386 kb on - strand at 751.386 kb on - strand at 751.906 kb on - strand, within MPMX19_03374 at 751.906 kb on - strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.121 kb on + strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.122 kb on - strand, within MPMX19_03374 at 752.154 kb on + strand, within MPMX19_03374 at 752.155 kb on - strand, within MPMX19_03374 at 752.155 kb on - strand, within MPMX19_03374 at 752.155 kb on - strand, within MPMX19_03374
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 749,085 + MPMX19_03372 0.70 +0.0 749,331 + MPMX19_03372 0.78 -1.6 749,331 + MPMX19_03372 0.78 -0.1 749,331 + MPMX19_03372 0.78 -0.8 749,331 + MPMX19_03372 0.78 +0.9 749,331 + MPMX19_03372 0.78 -0.9 749,331 + MPMX19_03372 0.78 -0.7 749,331 + MPMX19_03372 0.78 +0.9 749,332 - MPMX19_03372 0.78 +0.0 749,332 - MPMX19_03372 0.78 -2.2 749,332 - MPMX19_03372 0.78 -1.6 749,332 - MPMX19_03372 0.78 -1.1 749,332 - MPMX19_03372 0.78 -0.7 749,332 - MPMX19_03372 0.78 -0.7 749,463 + MPMX19_03372 0.82 +2.1 749,463 + MPMX19_03372 0.82 -0.3 749,463 + MPMX19_03372 0.82 -0.4 749,463 + MPMX19_03372 0.82 +0.3 749,463 + MPMX19_03372 0.82 +0.3 749,463 + MPMX19_03372 0.82 -3.0 749,463 + MPMX19_03372 0.82 -1.3 749,463 + MPMX19_03372 0.82 -0.4 749,463 + MPMX19_03372 0.82 -0.1 749,463 + MPMX19_03372 0.82 -0.6 749,463 + MPMX19_03372 0.82 -0.1 749,463 + MPMX19_03372 0.82 +0.5 749,463 + MPMX19_03372 0.82 -2.3 749,463 + MPMX19_03372 0.82 -0.2 749,463 + MPMX19_03372 0.82 +1.0 749,463 + MPMX19_03372 0.82 +0.6 749,464 - MPMX19_03372 0.82 +0.1 749,464 - MPMX19_03372 0.82 +0.4 749,464 - MPMX19_03372 0.82 -0.3 749,464 - MPMX19_03372 0.82 +0.1 749,464 - MPMX19_03372 0.82 +0.4 749,464 - MPMX19_03372 0.82 +0.0 749,464 - MPMX19_03372 0.82 +0.0 749,464 - MPMX19_03372 0.82 -0.3 749,464 - MPMX19_03372 0.82 -0.3 749,464 - MPMX19_03372 0.82 +0.5 749,464 - MPMX19_03372 0.82 +0.0 749,464 - MPMX19_03372 0.82 -1.9 749,464 - MPMX19_03372 0.82 -0.2 749,589 + MPMX19_03372 0.86 -0.0 749,589 + MPMX19_03372 0.86 +0.2 749,589 + MPMX19_03372 0.86 -0.3 749,589 + MPMX19_03372 0.86 -0.4 749,589 + MPMX19_03372 0.86 +1.5 749,589 + MPMX19_03372 0.86 -0.2 749,589 + MPMX19_03372 0.86 -1.0 749,589 + MPMX19_03372 0.86 +1.1 749,589 + MPMX19_03372 0.86 -0.3 749,589 + MPMX19_03372 0.86 +0.3 749,589 + MPMX19_03372 0.86 -1.9 749,589 + MPMX19_03372 0.86 -0.6 749,589 + MPMX19_03372 0.86 +0.7 749,589 + MPMX19_03372 0.86 +0.5 749,589 + MPMX19_03372 0.86 +0.4 749,590 - MPMX19_03372 0.86 -0.2 749,590 - MPMX19_03372 0.86 +0.7 749,590 - MPMX19_03372 0.86 +0.6 749,590 - MPMX19_03372 0.86 -1.0 749,590 - MPMX19_03372 0.86 -0.2 749,590 - MPMX19_03372 0.86 -1.2 749,590 - MPMX19_03372 0.86 +0.2 749,590 - MPMX19_03372 0.86 +0.1 749,590 - MPMX19_03372 0.86 +0.1 749,590 - MPMX19_03372 0.86 -0.2 749,590 - MPMX19_03372 0.86 -2.3 749,590 - MPMX19_03372 0.86 +0.7 749,590 - MPMX19_03372 0.86 +0.1 750,033 + +0.2 750,033 + -1.4 750,033 + +1.0 750,033 + +0.9 750,033 + -0.9 750,033 + -0.9 750,033 + -0.1 750,033 + -0.0 750,034 - +0.2 750,034 - -1.4 750,034 - +0.5 750,034 - -0.4 750,034 - -0.5 750,034 - +0.6 750,034 - +0.5 750,034 - +1.5 750,109 + -1.2 750,109 + -0.1 750,109 + -0.2 750,109 + -1.4 750,109 + +0.4 750,109 + -0.2 750,109 + -0.7 750,109 + -1.1 750,110 - -0.8 750,110 - +0.5 750,110 - -0.2 750,110 - -0.5 750,175 + -1.0 750,175 + +0.1 750,175 + +0.6 750,175 + -1.5 750,176 - +0.1 750,176 - -3.4 750,191 - +0.1 750,229 + MPMX19_03373 0.12 -1.6 750,229 + MPMX19_03373 0.12 -0.3 750,229 + MPMX19_03373 0.12 +0.1 750,229 + MPMX19_03373 0.12 -1.2 750,229 + MPMX19_03373 0.12 -0.4 750,229 + MPMX19_03373 0.12 +0.9 750,229 + MPMX19_03373 0.12 -0.4 750,229 + MPMX19_03373 0.12 -0.1 750,229 + MPMX19_03373 0.12 -0.1 750,229 + MPMX19_03373 0.12 -1.1 750,229 + MPMX19_03373 0.12 -0.1 750,229 + MPMX19_03373 0.12 -0.5 750,229 + MPMX19_03373 0.12 -1.4 750,230 - MPMX19_03373 0.12 -0.6 750,230 - MPMX19_03373 0.12 +0.7 750,230 - MPMX19_03373 0.12 -0.8 750,230 - MPMX19_03373 0.12 -1.0 750,230 - MPMX19_03373 0.12 +0.3 750,230 - MPMX19_03373 0.12 +0.3 750,230 - MPMX19_03373 0.12 -0.9 750,232 + MPMX19_03373 0.12 -0.1 750,232 + MPMX19_03373 0.12 -0.5 750,232 + MPMX19_03373 0.12 -0.7 750,232 + MPMX19_03373 0.12 +1.3 750,233 - MPMX19_03373 0.13 -1.9 750,233 - MPMX19_03373 0.13 +0.9 750,293 + MPMX19_03373 0.17 -0.3 750,293 + MPMX19_03373 0.17 +0.1 750,293 + MPMX19_03373 0.17 -0.2 750,358 + MPMX19_03373 0.21 -1.2 750,358 + MPMX19_03373 0.21 -1.4 750,359 - MPMX19_03373 0.22 +0.1 750,359 - MPMX19_03373 0.22 +1.4 750,359 - MPMX19_03373 0.22 -0.5 750,533 - MPMX19_03373 0.34 -2.0 750,608 - MPMX19_03373 0.39 -0.6 751,189 + MPMX19_03373 0.81 +0.1 751,189 + MPMX19_03373 0.81 +0.0 751,189 + MPMX19_03373 0.81 -0.2 751,190 - MPMX19_03373 0.81 +0.0 751,190 - MPMX19_03373 0.81 -1.2 751,190 - MPMX19_03373 0.81 +0.5 751,190 - MPMX19_03373 0.81 -0.4 751,190 - MPMX19_03373 0.81 +0.7 751,190 - MPMX19_03373 0.81 +0.7 751,190 - MPMX19_03373 0.81 +0.4 751,386 - -0.6 751,386 - +0.3 751,906 - MPMX19_03374 0.27 -0.7 751,906 - MPMX19_03374 0.27 -0.5 752,121 + MPMX19_03374 0.39 +0.7 752,121 + MPMX19_03374 0.39 -1.9 752,121 + MPMX19_03374 0.39 -0.5 752,121 + MPMX19_03374 0.39 +0.3 752,121 + MPMX19_03374 0.39 +0.6 752,121 + MPMX19_03374 0.39 -1.4 752,121 + MPMX19_03374 0.39 -0.4 752,121 + MPMX19_03374 0.39 +0.2 752,121 + MPMX19_03374 0.39 -0.0 752,121 + MPMX19_03374 0.39 -0.2 752,122 - MPMX19_03374 0.40 -0.7 752,122 - MPMX19_03374 0.40 -1.1 752,122 - MPMX19_03374 0.40 +1.4 752,122 - MPMX19_03374 0.40 +0.4 752,122 - MPMX19_03374 0.40 +0.3 752,122 - MPMX19_03374 0.40 +0.5 752,122 - MPMX19_03374 0.40 -0.9 752,122 - MPMX19_03374 0.40 -1.0 752,122 - MPMX19_03374 0.40 -1.1 752,122 - MPMX19_03374 0.40 -0.0 752,122 - MPMX19_03374 0.40 -2.3 752,154 + MPMX19_03374 0.41 +0.7 752,155 - MPMX19_03374 0.41 -2.3 752,155 - MPMX19_03374 0.41 -0.7 752,155 - MPMX19_03374 0.41 -0.3
Or see this region's nucleotide sequence