Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03359 and MPMX19_03360 overlap by 4 nucleotides MPMX19_03360 and MPMX19_03361 are separated by 31 nucleotides MPMX19_03361 and MPMX19_03362 are separated by 56 nucleotides
MPMX19_03359: MPMX19_03359 - hypothetical protein, at 732,955 to 733,701
_03359
MPMX19_03360: MPMX19_03360 - hypothetical protein, at 733,698 to 734,111
_03360
MPMX19_03361: MPMX19_03361 - hypothetical protein, at 734,143 to 735,297
_03361
MPMX19_03362: MPMX19_03362 - ABC transporter ATP-binding/permease protein YojI, at 735,354 to 737,027
_03362
Position (kb)
734
735
736 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 733.181 kb on + strand, within MPMX19_03359 at 733.181 kb on + strand, within MPMX19_03359 at 733.181 kb on + strand, within MPMX19_03359 at 733.181 kb on + strand, within MPMX19_03359 at 733.181 kb on + strand, within MPMX19_03359 at 733.181 kb on + strand, within MPMX19_03359 at 733.181 kb on + strand, within MPMX19_03359 at 733.181 kb on + strand, within MPMX19_03359 at 733.181 kb on + strand, within MPMX19_03359 at 733.181 kb on + strand, within MPMX19_03359 at 733.182 kb on - strand, within MPMX19_03359 at 733.182 kb on - strand, within MPMX19_03359 at 733.182 kb on - strand, within MPMX19_03359 at 733.182 kb on - strand, within MPMX19_03359 at 733.184 kb on + strand, within MPMX19_03359 at 733.184 kb on + strand, within MPMX19_03359 at 733.184 kb on + strand, within MPMX19_03359 at 733.184 kb on + strand, within MPMX19_03359 at 733.185 kb on - strand, within MPMX19_03359 at 733.185 kb on - strand, within MPMX19_03359 at 733.185 kb on - strand, within MPMX19_03359 at 733.185 kb on - strand, within MPMX19_03359 at 733.185 kb on - strand, within MPMX19_03359 at 733.185 kb on - strand, within MPMX19_03359 at 733.185 kb on - strand, within MPMX19_03359 at 733.185 kb on - strand, within MPMX19_03359 at 733.209 kb on + strand, within MPMX19_03359 at 733.210 kb on - strand, within MPMX19_03359 at 733.210 kb on - strand, within MPMX19_03359 at 733.210 kb on - strand, within MPMX19_03359 at 733.289 kb on + strand, within MPMX19_03359 at 733.289 kb on + strand, within MPMX19_03359 at 733.289 kb on + strand, within MPMX19_03359 at 733.289 kb on + strand, within MPMX19_03359 at 733.289 kb on + strand, within MPMX19_03359 at 733.289 kb on + strand, within MPMX19_03359 at 733.289 kb on + strand, within MPMX19_03359 at 733.290 kb on - strand, within MPMX19_03359 at 733.290 kb on - strand, within MPMX19_03359 at 733.290 kb on - strand, within MPMX19_03359 at 733.296 kb on - strand, within MPMX19_03359 at 733.296 kb on - strand, within MPMX19_03359 at 733.296 kb on - strand, within MPMX19_03359 at 733.319 kb on + strand, within MPMX19_03359 at 733.319 kb on + strand, within MPMX19_03359 at 733.319 kb on + strand, within MPMX19_03359 at 733.319 kb on + strand, within MPMX19_03359 at 733.319 kb on + strand, within MPMX19_03359 at 733.320 kb on - strand, within MPMX19_03359 at 733.320 kb on - strand, within MPMX19_03359 at 733.320 kb on - strand, within MPMX19_03359 at 733.320 kb on - strand, within MPMX19_03359 at 733.320 kb on - strand, within MPMX19_03359 at 733.328 kb on + strand, within MPMX19_03359 at 733.329 kb on - strand, within MPMX19_03359 at 733.487 kb on + strand, within MPMX19_03359 at 733.487 kb on + strand, within MPMX19_03359 at 733.487 kb on + strand, within MPMX19_03359 at 733.487 kb on + strand, within MPMX19_03359 at 733.487 kb on + strand, within MPMX19_03359 at 733.487 kb on + strand, within MPMX19_03359 at 733.488 kb on - strand, within MPMX19_03359 at 733.488 kb on - strand, within MPMX19_03359 at 733.575 kb on - strand, within MPMX19_03359 at 733.587 kb on - strand, within MPMX19_03359 at 733.587 kb on - strand, within MPMX19_03359 at 733.701 kb on + strand at 733.701 kb on + strand at 733.701 kb on + strand at 733.702 kb on - strand at 733.702 kb on - strand at 733.702 kb on - strand at 733.720 kb on + strand at 733.720 kb on + strand at 733.720 kb on + strand at 733.720 kb on + strand at 733.720 kb on + strand at 733.720 kb on + strand at 733.720 kb on + strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.721 kb on - strand at 733.765 kb on + strand, within MPMX19_03360 at 733.765 kb on + strand, within MPMX19_03360 at 733.765 kb on + strand, within MPMX19_03360 at 733.765 kb on + strand, within MPMX19_03360 at 733.765 kb on + strand, within MPMX19_03360 at 733.765 kb on + strand, within MPMX19_03360 at 733.765 kb on + strand, within MPMX19_03360 at 733.765 kb on + strand, within MPMX19_03360 at 733.766 kb on - strand, within MPMX19_03360 at 733.766 kb on - strand, within MPMX19_03360 at 733.766 kb on - strand, within MPMX19_03360 at 733.766 kb on - strand, within MPMX19_03360 at 734.255 kb on + strand at 734.255 kb on + strand at 734.255 kb on + strand at 734.256 kb on - strand at 734.256 kb on - strand at 734.256 kb on - strand at 734.256 kb on - strand at 734.256 kb on - strand at 734.256 kb on - strand at 734.256 kb on - strand at 734.256 kb on - strand at 734.256 kb on - strand at 734.342 kb on + strand, within MPMX19_03361 at 734.342 kb on + strand, within MPMX19_03361 at 734.342 kb on + strand, within MPMX19_03361 at 734.342 kb on + strand, within MPMX19_03361 at 734.342 kb on + strand, within MPMX19_03361 at 734.342 kb on + strand, within MPMX19_03361 at 734.343 kb on - strand, within MPMX19_03361 at 734.343 kb on - strand, within MPMX19_03361 at 734.343 kb on - strand, within MPMX19_03361 at 734.398 kb on + strand, within MPMX19_03361 at 734.399 kb on - strand, within MPMX19_03361 at 734.399 kb on - strand, within MPMX19_03361 at 734.406 kb on - strand, within MPMX19_03361 at 734.459 kb on + strand, within MPMX19_03361 at 734.459 kb on + strand, within MPMX19_03361 at 734.549 kb on + strand, within MPMX19_03361 at 734.549 kb on + strand, within MPMX19_03361 at 734.550 kb on - strand, within MPMX19_03361 at 734.816 kb on + strand, within MPMX19_03361 at 734.816 kb on + strand, within MPMX19_03361 at 734.816 kb on + strand, within MPMX19_03361 at 734.816 kb on + strand, within MPMX19_03361 at 734.817 kb on - strand, within MPMX19_03361 at 734.817 kb on - strand, within MPMX19_03361 at 734.817 kb on - strand, within MPMX19_03361 at 734.817 kb on - strand, within MPMX19_03361 at 734.817 kb on - strand, within MPMX19_03361 at 735.015 kb on + strand, within MPMX19_03361 at 735.015 kb on + strand, within MPMX19_03361 at 735.015 kb on + strand, within MPMX19_03361 at 735.119 kb on + strand, within MPMX19_03361 at 735.119 kb on + strand, within MPMX19_03361 at 735.120 kb on - strand, within MPMX19_03361 at 735.120 kb on - strand, within MPMX19_03361 at 735.120 kb on - strand, within MPMX19_03361 at 735.120 kb on - strand, within MPMX19_03361 at 735.120 kb on - strand, within MPMX19_03361 at 735.251 kb on + strand at 735.251 kb on + strand at 735.252 kb on - strand at 735.469 kb on + strand at 735.469 kb on + strand at 735.469 kb on + strand at 735.470 kb on - strand at 735.470 kb on - strand at 735.470 kb on - strand at 735.538 kb on + strand, within MPMX19_03362 at 735.539 kb on - strand, within MPMX19_03362 at 735.557 kb on - strand, within MPMX19_03362 at 735.760 kb on + strand, within MPMX19_03362 at 735.761 kb on - strand, within MPMX19_03362 at 735.761 kb on - strand, within MPMX19_03362 at 735.880 kb on + strand, within MPMX19_03362 at 736.130 kb on - strand, within MPMX19_03362 at 736.130 kb on - strand, within MPMX19_03362 at 736.130 kb on - strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.159 kb on + strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.160 kb on - strand, within MPMX19_03362 at 736.168 kb on + strand, within MPMX19_03362 at 736.294 kb on + strand, within MPMX19_03362 at 736.294 kb on + strand, within MPMX19_03362 at 736.297 kb on + strand, within MPMX19_03362 at 736.297 kb on + strand, within MPMX19_03362 at 736.297 kb on + strand, within MPMX19_03362 at 736.297 kb on + strand, within MPMX19_03362 at 736.297 kb on + strand, within MPMX19_03362
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 733,181 + MPMX19_03359 0.30 -0.3 733,181 + MPMX19_03359 0.30 -0.6 733,181 + MPMX19_03359 0.30 -1.5 733,181 + MPMX19_03359 0.30 -1.4 733,181 + MPMX19_03359 0.30 +0.4 733,181 + MPMX19_03359 0.30 -0.7 733,181 + MPMX19_03359 0.30 -0.9 733,181 + MPMX19_03359 0.30 +0.3 733,181 + MPMX19_03359 0.30 -0.2 733,181 + MPMX19_03359 0.30 +0.5 733,182 - MPMX19_03359 0.30 +0.1 733,182 - MPMX19_03359 0.30 -1.5 733,182 - MPMX19_03359 0.30 +0.1 733,182 - MPMX19_03359 0.30 -0.7 733,184 + MPMX19_03359 0.31 +0.1 733,184 + MPMX19_03359 0.31 -0.5 733,184 + MPMX19_03359 0.31 +0.5 733,184 + MPMX19_03359 0.31 -2.2 733,185 - MPMX19_03359 0.31 +0.5 733,185 - MPMX19_03359 0.31 -1.9 733,185 - MPMX19_03359 0.31 -0.6 733,185 - MPMX19_03359 0.31 -2.0 733,185 - MPMX19_03359 0.31 +0.4 733,185 - MPMX19_03359 0.31 -0.0 733,185 - MPMX19_03359 0.31 -1.6 733,185 - MPMX19_03359 0.31 -2.9 733,209 + MPMX19_03359 0.34 -1.7 733,210 - MPMX19_03359 0.34 -1.3 733,210 - MPMX19_03359 0.34 -0.7 733,210 - MPMX19_03359 0.34 +0.3 733,289 + MPMX19_03359 0.45 +0.2 733,289 + MPMX19_03359 0.45 -0.2 733,289 + MPMX19_03359 0.45 -0.7 733,289 + MPMX19_03359 0.45 -1.3 733,289 + MPMX19_03359 0.45 +0.5 733,289 + MPMX19_03359 0.45 +0.5 733,289 + MPMX19_03359 0.45 +0.6 733,290 - MPMX19_03359 0.45 -0.4 733,290 - MPMX19_03359 0.45 -0.5 733,290 - MPMX19_03359 0.45 -1.0 733,296 - MPMX19_03359 0.46 -1.2 733,296 - MPMX19_03359 0.46 -0.8 733,296 - MPMX19_03359 0.46 -0.5 733,319 + MPMX19_03359 0.49 -1.1 733,319 + MPMX19_03359 0.49 +0.3 733,319 + MPMX19_03359 0.49 +0.8 733,319 + MPMX19_03359 0.49 -0.3 733,319 + MPMX19_03359 0.49 +0.9 733,320 - MPMX19_03359 0.49 -1.5 733,320 - MPMX19_03359 0.49 +0.6 733,320 - MPMX19_03359 0.49 +0.5 733,320 - MPMX19_03359 0.49 -2.3 733,320 - MPMX19_03359 0.49 -0.9 733,328 + MPMX19_03359 0.50 -2.1 733,329 - MPMX19_03359 0.50 -0.6 733,487 + MPMX19_03359 0.71 +1.0 733,487 + MPMX19_03359 0.71 -0.3 733,487 + MPMX19_03359 0.71 -0.8 733,487 + MPMX19_03359 0.71 +0.0 733,487 + MPMX19_03359 0.71 +0.4 733,487 + MPMX19_03359 0.71 -2.0 733,488 - MPMX19_03359 0.71 -0.4 733,488 - MPMX19_03359 0.71 +0.3 733,575 - MPMX19_03359 0.83 -0.9 733,587 - MPMX19_03359 0.85 -0.5 733,587 - MPMX19_03359 0.85 +0.0 733,701 + +0.1 733,701 + -0.0 733,701 + -1.1 733,702 - -0.1 733,702 - -2.4 733,702 - -1.5 733,720 + -0.3 733,720 + -1.6 733,720 + +0.1 733,720 + -1.1 733,720 + +1.0 733,720 + -0.6 733,720 + -1.2 733,721 - +0.0 733,721 - -0.6 733,721 - -0.2 733,721 - +1.4 733,721 - -1.7 733,721 - -1.5 733,721 - -1.1 733,721 - -0.1 733,721 - -0.5 733,721 - -0.5 733,721 - +0.7 733,721 - -0.3 733,765 + MPMX19_03360 0.16 +1.2 733,765 + MPMX19_03360 0.16 +0.7 733,765 + MPMX19_03360 0.16 -1.5 733,765 + MPMX19_03360 0.16 +1.7 733,765 + MPMX19_03360 0.16 -0.5 733,765 + MPMX19_03360 0.16 -0.3 733,765 + MPMX19_03360 0.16 +0.5 733,765 + MPMX19_03360 0.16 -1.2 733,766 - MPMX19_03360 0.16 +0.6 733,766 - MPMX19_03360 0.16 -1.4 733,766 - MPMX19_03360 0.16 +1.0 733,766 - MPMX19_03360 0.16 -1.0 734,255 + -0.5 734,255 + -1.4 734,255 + +0.6 734,256 - -0.2 734,256 - -1.6 734,256 - +0.2 734,256 - -2.4 734,256 - +0.1 734,256 - -0.3 734,256 - +0.2 734,256 - -1.3 734,256 - -1.1 734,342 + MPMX19_03361 0.17 +0.3 734,342 + MPMX19_03361 0.17 -1.7 734,342 + MPMX19_03361 0.17 -1.5 734,342 + MPMX19_03361 0.17 -1.0 734,342 + MPMX19_03361 0.17 +0.3 734,342 + MPMX19_03361 0.17 +0.4 734,343 - MPMX19_03361 0.17 -1.2 734,343 - MPMX19_03361 0.17 -0.5 734,343 - MPMX19_03361 0.17 -0.4 734,398 + MPMX19_03361 0.22 -1.3 734,399 - MPMX19_03361 0.22 -0.2 734,399 - MPMX19_03361 0.22 -0.7 734,406 - MPMX19_03361 0.23 +0.1 734,459 + MPMX19_03361 0.27 -0.0 734,459 + MPMX19_03361 0.27 +0.6 734,549 + MPMX19_03361 0.35 +0.5 734,549 + MPMX19_03361 0.35 +0.9 734,550 - MPMX19_03361 0.35 -0.7 734,816 + MPMX19_03361 0.58 -0.7 734,816 + MPMX19_03361 0.58 -0.5 734,816 + MPMX19_03361 0.58 -1.3 734,816 + MPMX19_03361 0.58 -0.5 734,817 - MPMX19_03361 0.58 -0.9 734,817 - MPMX19_03361 0.58 -0.2 734,817 - MPMX19_03361 0.58 -1.6 734,817 - MPMX19_03361 0.58 -0.6 734,817 - MPMX19_03361 0.58 -0.6 735,015 + MPMX19_03361 0.75 -1.0 735,015 + MPMX19_03361 0.75 -0.5 735,015 + MPMX19_03361 0.75 -1.3 735,119 + MPMX19_03361 0.85 -0.7 735,119 + MPMX19_03361 0.85 -0.9 735,120 - MPMX19_03361 0.85 -0.7 735,120 - MPMX19_03361 0.85 -0.6 735,120 - MPMX19_03361 0.85 +0.7 735,120 - MPMX19_03361 0.85 -1.3 735,120 - MPMX19_03361 0.85 -1.1 735,251 + +0.5 735,251 + +1.0 735,252 - +1.1 735,469 + -0.7 735,469 + -0.7 735,469 + +0.3 735,470 - +0.4 735,470 - +1.6 735,470 - -0.7 735,538 + MPMX19_03362 0.11 +1.5 735,539 - MPMX19_03362 0.11 -0.2 735,557 - MPMX19_03362 0.12 -0.6 735,760 + MPMX19_03362 0.24 -1.7 735,761 - MPMX19_03362 0.24 -1.8 735,761 - MPMX19_03362 0.24 -0.6 735,880 + MPMX19_03362 0.31 +0.2 736,130 - MPMX19_03362 0.46 -1.3 736,130 - MPMX19_03362 0.46 +0.7 736,130 - MPMX19_03362 0.46 -0.5 736,159 + MPMX19_03362 0.48 -0.8 736,159 + MPMX19_03362 0.48 +0.1 736,159 + MPMX19_03362 0.48 -0.2 736,159 + MPMX19_03362 0.48 -0.2 736,159 + MPMX19_03362 0.48 -0.1 736,159 + MPMX19_03362 0.48 +0.3 736,159 + MPMX19_03362 0.48 -0.1 736,159 + MPMX19_03362 0.48 -1.5 736,159 + MPMX19_03362 0.48 -0.3 736,159 + MPMX19_03362 0.48 -0.3 736,159 + MPMX19_03362 0.48 -0.2 736,159 + MPMX19_03362 0.48 -0.2 736,160 - MPMX19_03362 0.48 +0.4 736,160 - MPMX19_03362 0.48 +1.1 736,160 - MPMX19_03362 0.48 +0.1 736,160 - MPMX19_03362 0.48 +0.3 736,160 - MPMX19_03362 0.48 -2.0 736,160 - MPMX19_03362 0.48 +0.3 736,160 - MPMX19_03362 0.48 -1.3 736,160 - MPMX19_03362 0.48 -0.6 736,160 - MPMX19_03362 0.48 -0.3 736,160 - MPMX19_03362 0.48 -0.5 736,160 - MPMX19_03362 0.48 -0.4 736,160 - MPMX19_03362 0.48 +0.5 736,160 - MPMX19_03362 0.48 +0.1 736,160 - MPMX19_03362 0.48 -1.4 736,160 - MPMX19_03362 0.48 -0.0 736,160 - MPMX19_03362 0.48 -0.1 736,160 - MPMX19_03362 0.48 -0.6 736,160 - MPMX19_03362 0.48 -0.4 736,160 - MPMX19_03362 0.48 +1.3 736,160 - MPMX19_03362 0.48 +0.4 736,168 + MPMX19_03362 0.49 +0.5 736,294 + MPMX19_03362 0.56 -0.6 736,294 + MPMX19_03362 0.56 -0.6 736,297 + MPMX19_03362 0.56 +0.7 736,297 + MPMX19_03362 0.56 -1.0 736,297 + MPMX19_03362 0.56 +1.0 736,297 + MPMX19_03362 0.56 -0.1 736,297 + MPMX19_03362 0.56 +0.0
Or see this region's nucleotide sequence