Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03342 and MPMX19_03343 overlap by 4 nucleotides MPMX19_03343 and MPMX19_03344 are separated by 49 nucleotides MPMX19_03344 and MPMX19_03345 are separated by 123 nucleotides
MPMX19_03342: MPMX19_03342 - hypothetical protein, at 700,269 to 700,505
_03342
MPMX19_03343: MPMX19_03343 - hypothetical protein, at 700,502 to 701,356
_03343
MPMX19_03344: MPMX19_03344 - 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase, at 701,406 to 703,115
_03344
MPMX19_03345: MPMX19_03345 - Phenylacetaldehyde dehydrogenase, at 703,239 to 704,654
_03345
Position (kb) 701
702
703
704 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.775 kb on + strand, within MPMX19_03343 at 700.776 kb on - strand, within MPMX19_03343 at 700.776 kb on - strand, within MPMX19_03343 at 700.776 kb on - strand, within MPMX19_03343 at 700.776 kb on - strand, within MPMX19_03343 at 700.776 kb on - strand, within MPMX19_03343 at 700.776 kb on - strand, within MPMX19_03343 at 700.777 kb on + strand, within MPMX19_03343 at 700.777 kb on + strand, within MPMX19_03343 at 700.777 kb on + strand, within MPMX19_03343 at 700.777 kb on + strand, within MPMX19_03343 at 700.777 kb on + strand, within MPMX19_03343 at 700.777 kb on + strand, within MPMX19_03343 at 700.777 kb on + strand, within MPMX19_03343 at 700.778 kb on - strand, within MPMX19_03343 at 700.778 kb on - strand, within MPMX19_03343 at 700.778 kb on - strand, within MPMX19_03343 at 701.053 kb on + strand, within MPMX19_03343 at 701.053 kb on + strand, within MPMX19_03343 at 701.053 kb on + strand, within MPMX19_03343 at 701.053 kb on + strand, within MPMX19_03343 at 701.053 kb on + strand, within MPMX19_03343 at 701.053 kb on + strand, within MPMX19_03343 at 701.053 kb on + strand, within MPMX19_03343 at 701.053 kb on + strand, within MPMX19_03343 at 701.054 kb on - strand, within MPMX19_03343 at 701.054 kb on - strand, within MPMX19_03343 at 701.054 kb on - strand, within MPMX19_03343 at 701.054 kb on - strand, within MPMX19_03343 at 701.054 kb on - strand, within MPMX19_03343 at 701.309 kb on + strand at 701.309 kb on + strand at 701.309 kb on + strand at 701.309 kb on + strand at 701.309 kb on + strand at 701.309 kb on + strand at 701.310 kb on - strand at 701.310 kb on - strand at 701.310 kb on - strand at 701.310 kb on - strand at 701.310 kb on - strand at 701.310 kb on - strand at 701.310 kb on - strand at 701.310 kb on - strand at 701.352 kb on + strand at 701.352 kb on + strand at 701.352 kb on + strand at 701.352 kb on + strand at 701.353 kb on - strand at 701.353 kb on - strand at 701.518 kb on + strand at 701.519 kb on - strand at 701.519 kb on - strand at 701.519 kb on - strand at 701.519 kb on - strand at 701.519 kb on - strand at 701.519 kb on - strand at 701.519 kb on - strand at 701.533 kb on + strand at 701.533 kb on + strand at 701.533 kb on + strand at 701.534 kb on - strand at 701.534 kb on - strand at 701.534 kb on - strand at 701.534 kb on - strand at 701.629 kb on + strand, within MPMX19_03344 at 701.629 kb on + strand, within MPMX19_03344 at 701.630 kb on - strand, within MPMX19_03344 at 701.683 kb on + strand, within MPMX19_03344 at 701.683 kb on + strand, within MPMX19_03344 at 701.683 kb on + strand, within MPMX19_03344 at 701.683 kb on - strand, within MPMX19_03344 at 701.684 kb on - strand, within MPMX19_03344 at 701.684 kb on - strand, within MPMX19_03344 at 701.684 kb on - strand, within MPMX19_03344 at 701.684 kb on - strand, within MPMX19_03344 at 701.684 kb on - strand, within MPMX19_03344 at 701.684 kb on - strand, within MPMX19_03344 at 701.684 kb on - strand, within MPMX19_03344 at 701.710 kb on + strand, within MPMX19_03344 at 701.710 kb on + strand, within MPMX19_03344 at 701.710 kb on + strand, within MPMX19_03344 at 701.711 kb on - strand, within MPMX19_03344 at 701.711 kb on - strand, within MPMX19_03344 at 701.711 kb on - strand, within MPMX19_03344 at 701.711 kb on - strand, within MPMX19_03344 at 701.711 kb on - strand, within MPMX19_03344 at 701.711 kb on - strand, within MPMX19_03344 at 701.711 kb on - strand, within MPMX19_03344 at 701.711 kb on - strand, within MPMX19_03344 at 701.711 kb on - strand, within MPMX19_03344 at 701.767 kb on + strand, within MPMX19_03344 at 701.767 kb on + strand, within MPMX19_03344 at 701.768 kb on - strand, within MPMX19_03344 at 701.768 kb on - strand, within MPMX19_03344 at 701.768 kb on - strand, within MPMX19_03344 at 701.857 kb on + strand, within MPMX19_03344 at 701.858 kb on - strand, within MPMX19_03344 at 701.875 kb on + strand, within MPMX19_03344 at 701.876 kb on - strand, within MPMX19_03344 at 702.155 kb on - strand, within MPMX19_03344 at 702.155 kb on - strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.340 kb on + strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.341 kb on - strand, within MPMX19_03344 at 702.703 kb on + strand, within MPMX19_03344 at 702.703 kb on + strand, within MPMX19_03344 at 702.703 kb on + strand, within MPMX19_03344 at 702.703 kb on + strand, within MPMX19_03344 at 702.703 kb on + strand, within MPMX19_03344 at 702.703 kb on + strand, within MPMX19_03344 at 702.704 kb on - strand, within MPMX19_03344 at 702.704 kb on - strand, within MPMX19_03344 at 702.766 kb on + strand, within MPMX19_03344 at 702.766 kb on + strand, within MPMX19_03344 at 702.766 kb on + strand, within MPMX19_03344 at 702.766 kb on + strand, within MPMX19_03344 at 702.766 kb on + strand, within MPMX19_03344 at 702.766 kb on + strand, within MPMX19_03344 at 702.766 kb on + strand, within MPMX19_03344 at 702.766 kb on + strand, within MPMX19_03344 at 702.766 kb on + strand, within MPMX19_03344 at 702.767 kb on - strand, within MPMX19_03344 at 702.767 kb on - strand, within MPMX19_03344 at 702.767 kb on - strand, within MPMX19_03344 at 702.955 kb on + strand at 702.956 kb on - strand at 702.956 kb on - strand at 702.956 kb on - strand at 702.956 kb on - strand at 702.956 kb on - strand at 702.956 kb on - strand at 702.956 kb on - strand at 702.956 kb on - strand at 702.956 kb on - strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.081 kb on + strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.082 kb on - strand at 703.110 kb on - strand at 703.110 kb on - strand at 703.141 kb on + strand at 703.141 kb on + strand at 703.142 kb on - strand at 703.142 kb on - strand at 703.142 kb on - strand at 703.142 kb on - strand at 703.197 kb on + strand at 703.240 kb on + strand at 703.240 kb on + strand at 703.420 kb on + strand, within MPMX19_03345 at 703.421 kb on - strand, within MPMX19_03345 at 703.465 kb on + strand, within MPMX19_03345 at 703.465 kb on + strand, within MPMX19_03345 at 703.687 kb on + strand, within MPMX19_03345 at 703.687 kb on + strand, within MPMX19_03345 at 703.688 kb on - strand, within MPMX19_03345 at 703.688 kb on - strand, within MPMX19_03345 at 703.688 kb on - strand, within MPMX19_03345 at 703.688 kb on - strand, within MPMX19_03345 at 703.688 kb on - strand, within MPMX19_03345 at 703.792 kb on + strand, within MPMX19_03345 at 703.792 kb on + strand, within MPMX19_03345 at 703.792 kb on + strand, within MPMX19_03345 at 703.793 kb on - strand, within MPMX19_03345 at 703.793 kb on - strand, within MPMX19_03345 at 703.793 kb on - strand, within MPMX19_03345 at 703.810 kb on + strand, within MPMX19_03345 at 703.811 kb on - strand, within MPMX19_03345 at 703.811 kb on - strand, within MPMX19_03345 at 703.811 kb on - strand, within MPMX19_03345 at 703.811 kb on - strand, within MPMX19_03345 at 703.811 kb on - strand, within MPMX19_03345
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 700,775 + MPMX19_03343 0.32 +0.5 700,775 + MPMX19_03343 0.32 -0.2 700,775 + MPMX19_03343 0.32 -0.2 700,775 + MPMX19_03343 0.32 +0.6 700,775 + MPMX19_03343 0.32 +0.5 700,775 + MPMX19_03343 0.32 +0.0 700,775 + MPMX19_03343 0.32 -0.9 700,775 + MPMX19_03343 0.32 -0.7 700,775 + MPMX19_03343 0.32 -1.8 700,775 + MPMX19_03343 0.32 -2.4 700,775 + MPMX19_03343 0.32 +1.2 700,776 - MPMX19_03343 0.32 -0.2 700,776 - MPMX19_03343 0.32 -1.4 700,776 - MPMX19_03343 0.32 -0.4 700,776 - MPMX19_03343 0.32 +1.7 700,776 - MPMX19_03343 0.32 -0.1 700,776 - MPMX19_03343 0.32 +1.4 700,777 + MPMX19_03343 0.32 -1.4 700,777 + MPMX19_03343 0.32 +0.6 700,777 + MPMX19_03343 0.32 -0.3 700,777 + MPMX19_03343 0.32 +0.2 700,777 + MPMX19_03343 0.32 +1.3 700,777 + MPMX19_03343 0.32 +0.0 700,777 + MPMX19_03343 0.32 -0.1 700,778 - MPMX19_03343 0.32 -1.8 700,778 - MPMX19_03343 0.32 -1.3 700,778 - MPMX19_03343 0.32 -1.4 701,053 + MPMX19_03343 0.64 -0.3 701,053 + MPMX19_03343 0.64 -0.3 701,053 + MPMX19_03343 0.64 -0.4 701,053 + MPMX19_03343 0.64 -2.0 701,053 + MPMX19_03343 0.64 -2.1 701,053 + MPMX19_03343 0.64 -1.3 701,053 + MPMX19_03343 0.64 -0.4 701,053 + MPMX19_03343 0.64 +1.7 701,054 - MPMX19_03343 0.65 -1.0 701,054 - MPMX19_03343 0.65 -0.8 701,054 - MPMX19_03343 0.65 -0.9 701,054 - MPMX19_03343 0.65 +0.4 701,054 - MPMX19_03343 0.65 -0.1 701,309 + +0.0 701,309 + -1.2 701,309 + -0.6 701,309 + -0.3 701,309 + +0.1 701,309 + -0.0 701,310 - +1.5 701,310 - -1.4 701,310 - -0.3 701,310 - -0.3 701,310 - +0.7 701,310 - +0.5 701,310 - -0.9 701,310 - +0.1 701,352 + -2.0 701,352 + +0.2 701,352 + +0.7 701,352 + +0.6 701,353 - +0.3 701,353 - -2.7 701,518 + +0.1 701,519 - +0.1 701,519 - +4.3 701,519 - -0.1 701,519 - -1.2 701,519 - -1.9 701,519 - +0.5 701,519 - -0.9 701,533 + -1.1 701,533 + +0.5 701,533 + +0.3 701,534 - -1.6 701,534 - -0.9 701,534 - -0.2 701,534 - +0.3 701,629 + MPMX19_03344 0.13 -0.8 701,629 + MPMX19_03344 0.13 -0.7 701,630 - MPMX19_03344 0.13 -0.6 701,683 + MPMX19_03344 0.16 -1.9 701,683 + MPMX19_03344 0.16 -1.8 701,683 + MPMX19_03344 0.16 +1.4 701,683 - MPMX19_03344 0.16 +0.4 701,684 - MPMX19_03344 0.16 +0.1 701,684 - MPMX19_03344 0.16 -0.9 701,684 - MPMX19_03344 0.16 -0.3 701,684 - MPMX19_03344 0.16 +0.1 701,684 - MPMX19_03344 0.16 +0.5 701,684 - MPMX19_03344 0.16 +0.4 701,684 - MPMX19_03344 0.16 +0.6 701,710 + MPMX19_03344 0.18 -0.1 701,710 + MPMX19_03344 0.18 -1.3 701,710 + MPMX19_03344 0.18 -1.4 701,711 - MPMX19_03344 0.18 +0.8 701,711 - MPMX19_03344 0.18 +1.1 701,711 - MPMX19_03344 0.18 -1.4 701,711 - MPMX19_03344 0.18 +1.1 701,711 - MPMX19_03344 0.18 -0.2 701,711 - MPMX19_03344 0.18 -1.1 701,711 - MPMX19_03344 0.18 -0.6 701,711 - MPMX19_03344 0.18 -0.5 701,711 - MPMX19_03344 0.18 +0.3 701,767 + MPMX19_03344 0.21 -1.6 701,767 + MPMX19_03344 0.21 +1.0 701,768 - MPMX19_03344 0.21 +0.7 701,768 - MPMX19_03344 0.21 +0.5 701,768 - MPMX19_03344 0.21 -1.5 701,857 + MPMX19_03344 0.26 +1.3 701,858 - MPMX19_03344 0.26 -1.1 701,875 + MPMX19_03344 0.27 +0.6 701,876 - MPMX19_03344 0.27 +0.0 702,155 - MPMX19_03344 0.44 -0.3 702,155 - MPMX19_03344 0.44 -1.1 702,340 + MPMX19_03344 0.55 +0.3 702,340 + MPMX19_03344 0.55 -0.9 702,340 + MPMX19_03344 0.55 +0.1 702,340 + MPMX19_03344 0.55 -0.9 702,340 + MPMX19_03344 0.55 +1.2 702,340 + MPMX19_03344 0.55 -0.0 702,340 + MPMX19_03344 0.55 +0.2 702,340 + MPMX19_03344 0.55 +0.1 702,340 + MPMX19_03344 0.55 -0.9 702,340 + MPMX19_03344 0.55 -0.8 702,340 + MPMX19_03344 0.55 -0.1 702,341 - MPMX19_03344 0.55 +0.9 702,341 - MPMX19_03344 0.55 -1.5 702,341 - MPMX19_03344 0.55 +0.8 702,341 - MPMX19_03344 0.55 -0.6 702,341 - MPMX19_03344 0.55 -0.1 702,341 - MPMX19_03344 0.55 -0.1 702,341 - MPMX19_03344 0.55 +0.4 702,341 - MPMX19_03344 0.55 -0.1 702,341 - MPMX19_03344 0.55 -1.2 702,341 - MPMX19_03344 0.55 +0.7 702,341 - MPMX19_03344 0.55 -0.5 702,341 - MPMX19_03344 0.55 +0.0 702,341 - MPMX19_03344 0.55 -1.6 702,341 - MPMX19_03344 0.55 -0.2 702,703 + MPMX19_03344 0.76 +0.2 702,703 + MPMX19_03344 0.76 -1.5 702,703 + MPMX19_03344 0.76 -1.9 702,703 + MPMX19_03344 0.76 +0.3 702,703 + MPMX19_03344 0.76 +0.5 702,703 + MPMX19_03344 0.76 -1.4 702,704 - MPMX19_03344 0.76 -0.2 702,704 - MPMX19_03344 0.76 -0.6 702,766 + MPMX19_03344 0.80 -0.2 702,766 + MPMX19_03344 0.80 +1.0 702,766 + MPMX19_03344 0.80 -1.1 702,766 + MPMX19_03344 0.80 -1.3 702,766 + MPMX19_03344 0.80 +0.6 702,766 + MPMX19_03344 0.80 -1.0 702,766 + MPMX19_03344 0.80 -0.0 702,766 + MPMX19_03344 0.80 -1.4 702,766 + MPMX19_03344 0.80 +0.9 702,767 - MPMX19_03344 0.80 +1.0 702,767 - MPMX19_03344 0.80 -1.9 702,767 - MPMX19_03344 0.80 -0.3 702,955 + -0.6 702,956 - +0.7 702,956 - -0.9 702,956 - +0.1 702,956 - -0.3 702,956 - +0.5 702,956 - -0.9 702,956 - -1.0 702,956 - -1.7 702,956 - -2.7 703,081 + -0.7 703,081 + +0.4 703,081 + -0.4 703,081 + -0.1 703,081 + -0.7 703,081 + -0.1 703,081 + +2.2 703,081 + -0.0 703,081 + +0.0 703,081 + +1.3 703,081 + -0.9 703,081 + -0.6 703,081 + +0.4 703,081 + +0.6 703,081 + -0.7 703,081 + -1.5 703,081 + +1.1 703,081 + -0.9 703,082 - +0.8 703,082 - -0.7 703,082 - -1.2 703,082 - +0.3 703,082 - -2.0 703,082 - -0.1 703,082 - +0.3 703,082 - +0.7 703,082 - +0.7 703,082 - -1.6 703,082 - +0.6 703,082 - -1.7 703,082 - -0.1 703,082 - -0.9 703,110 - +0.7 703,110 - -0.1 703,141 + +0.1 703,141 + -0.3 703,142 - -0.5 703,142 - +1.7 703,142 - +0.1 703,142 - -0.6 703,197 + -0.6 703,240 + -0.3 703,240 + -0.5 703,420 + MPMX19_03345 0.13 -1.7 703,421 - MPMX19_03345 0.13 -0.7 703,465 + MPMX19_03345 0.16 +1.1 703,465 + MPMX19_03345 0.16 -1.3 703,687 + MPMX19_03345 0.32 -0.0 703,687 + MPMX19_03345 0.32 +0.5 703,688 - MPMX19_03345 0.32 +0.0 703,688 - MPMX19_03345 0.32 +0.1 703,688 - MPMX19_03345 0.32 +1.0 703,688 - MPMX19_03345 0.32 -0.2 703,688 - MPMX19_03345 0.32 -0.5 703,792 + MPMX19_03345 0.39 +0.3 703,792 + MPMX19_03345 0.39 +0.0 703,792 + MPMX19_03345 0.39 +0.2 703,793 - MPMX19_03345 0.39 -0.6 703,793 - MPMX19_03345 0.39 +0.1 703,793 - MPMX19_03345 0.39 +0.6 703,810 + MPMX19_03345 0.40 -2.4 703,811 - MPMX19_03345 0.40 +1.0 703,811 - MPMX19_03345 0.40 +0.2 703,811 - MPMX19_03345 0.40 -0.9 703,811 - MPMX19_03345 0.40 -0.2 703,811 - MPMX19_03345 0.40 +0.4
Or see this region's nucleotide sequence