Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03271 and MPMX19_03272 are separated by 14 nucleotides MPMX19_03272 and MPMX19_03273 overlap by 4 nucleotides
MPMX19_03271: MPMX19_03271 - hypothetical protein, at 615,289 to 616,344
_03271
MPMX19_03272: MPMX19_03272 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 616,359 to 617,402
_03272
MPMX19_03273: MPMX19_03273 - Oligosaccharide 4-alpha-D-glucosyltransferase, at 617,399 to 619,753
_03273
Position (kb) 616
617
618 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.364 kb on + strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.365 kb on - strand at 615.370 kb on + strand at 615.370 kb on + strand at 615.370 kb on + strand at 615.371 kb on - strand at 615.371 kb on - strand at 615.371 kb on - strand at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.691 kb on + strand, within MPMX19_03271 at 615.692 kb on - strand, within MPMX19_03271 at 615.692 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.800 kb on - strand, within MPMX19_03271 at 615.815 kb on - strand, within MPMX19_03271 at 615.898 kb on + strand, within MPMX19_03271 at 615.899 kb on - strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.994 kb on + strand, within MPMX19_03271 at 615.995 kb on - strand, within MPMX19_03271 at 615.995 kb on - strand, within MPMX19_03271 at 615.995 kb on - strand, within MPMX19_03271 at 616.063 kb on + strand, within MPMX19_03271 at 616.063 kb on + strand, within MPMX19_03271 at 616.063 kb on + strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.064 kb on - strand, within MPMX19_03271 at 616.240 kb on + strand at 616.240 kb on + strand at 616.240 kb on + strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.241 kb on - strand at 616.356 kb on + strand at 616.356 kb on + strand at 616.356 kb on + strand at 616.356 kb on + strand at 616.395 kb on + strand at 616.395 kb on + strand at 616.395 kb on + strand at 616.395 kb on + strand at 616.395 kb on + strand at 616.396 kb on - strand at 616.396 kb on - strand at 616.396 kb on - strand at 616.396 kb on - strand at 616.608 kb on + strand, within MPMX19_03272 at 616.608 kb on + strand, within MPMX19_03272 at 616.608 kb on + strand, within MPMX19_03272 at 616.608 kb on + strand, within MPMX19_03272 at 616.609 kb on - strand, within MPMX19_03272 at 616.609 kb on - strand, within MPMX19_03272 at 616.617 kb on + strand, within MPMX19_03272 at 616.618 kb on - strand, within MPMX19_03272 at 616.734 kb on + strand, within MPMX19_03272 at 616.734 kb on + strand, within MPMX19_03272 at 616.734 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.923 kb on + strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 616.924 kb on - strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.022 kb on + strand, within MPMX19_03272 at 617.023 kb on - strand, within MPMX19_03272 at 617.232 kb on + strand, within MPMX19_03272 at 617.233 kb on - strand, within MPMX19_03272 at 617.233 kb on - strand, within MPMX19_03272 at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.444 kb on + strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.445 kb on - strand at 617.537 kb on + strand at 617.537 kb on + strand at 617.538 kb on - strand at 617.538 kb on - strand at 617.538 kb on - strand at 617.588 kb on + strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.589 kb on - strand at 617.777 kb on + strand, within MPMX19_03273 at 617.777 kb on + strand, within MPMX19_03273 at 617.777 kb on + strand, within MPMX19_03273 at 617.777 kb on + strand, within MPMX19_03273 at 617.778 kb on - strand, within MPMX19_03273 at 617.778 kb on - strand, within MPMX19_03273 at 617.778 kb on - strand, within MPMX19_03273 at 617.813 kb on + strand, within MPMX19_03273 at 617.813 kb on + strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.814 kb on - strand, within MPMX19_03273 at 617.948 kb on + strand, within MPMX19_03273 at 617.948 kb on + strand, within MPMX19_03273 at 617.948 kb on + strand, within MPMX19_03273 at 617.948 kb on + strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 617.949 kb on - strand, within MPMX19_03273 at 618.002 kb on + strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.003 kb on - strand, within MPMX19_03273 at 618.005 kb on + strand, within MPMX19_03273 at 618.005 kb on + strand, within MPMX19_03273 at 618.005 kb on + strand, within MPMX19_03273 at 618.006 kb on - strand, within MPMX19_03273 at 618.006 kb on - strand, within MPMX19_03273 at 618.056 kb on + strand, within MPMX19_03273 at 618.056 kb on + strand, within MPMX19_03273 at 618.057 kb on - strand, within MPMX19_03273 at 618.057 kb on - strand, within MPMX19_03273 at 618.077 kb on + strand, within MPMX19_03273 at 618.078 kb on - strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.107 kb on + strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.108 kb on - strand, within MPMX19_03273 at 618.265 kb on - strand, within MPMX19_03273 at 618.321 kb on - strand, within MPMX19_03273 at 618.321 kb on - strand, within MPMX19_03273 at 618.321 kb on - strand, within MPMX19_03273 at 618.321 kb on - strand, within MPMX19_03273 at 618.398 kb on - strand, within MPMX19_03273 at 618.398 kb on - strand, within MPMX19_03273 at 618.398 kb on - strand, within MPMX19_03273
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 615,364 + -1.5 615,364 + -1.1 615,364 + -0.8 615,364 + +0.6 615,364 + +0.6 615,364 + -1.4 615,364 + +1.3 615,364 + -0.8 615,364 + -0.2 615,364 + +0.2 615,364 + -0.3 615,364 + +0.4 615,364 + -1.6 615,364 + -1.8 615,365 - -0.7 615,365 - -0.7 615,365 - -1.0 615,365 - -1.1 615,365 - +0.1 615,365 - -2.0 615,365 - +0.0 615,365 - +0.3 615,365 - -2.3 615,365 - -1.1 615,365 - -0.8 615,365 - +0.2 615,365 - +1.2 615,365 - -1.8 615,365 - -2.6 615,365 - -0.6 615,365 - -0.1 615,365 - -1.7 615,365 - +0.9 615,370 + -0.0 615,370 + +0.3 615,370 + -0.7 615,371 - -1.3 615,371 - -0.8 615,371 - +1.5 615,691 + MPMX19_03271 0.38 -0.9 615,691 + MPMX19_03271 0.38 -1.6 615,691 + MPMX19_03271 0.38 +0.7 615,691 + MPMX19_03271 0.38 -0.5 615,691 + MPMX19_03271 0.38 +0.4 615,691 + MPMX19_03271 0.38 +0.0 615,692 - MPMX19_03271 0.38 +0.2 615,692 - MPMX19_03271 0.38 -0.1 615,800 - MPMX19_03271 0.48 -1.1 615,800 - MPMX19_03271 0.48 -0.1 615,800 - MPMX19_03271 0.48 -0.6 615,800 - MPMX19_03271 0.48 +1.1 615,800 - MPMX19_03271 0.48 -1.9 615,815 - MPMX19_03271 0.50 -0.3 615,898 + MPMX19_03271 0.58 -3.0 615,899 - MPMX19_03271 0.58 -0.6 615,994 + MPMX19_03271 0.67 -0.3 615,994 + MPMX19_03271 0.67 -1.6 615,994 + MPMX19_03271 0.67 -0.3 615,994 + MPMX19_03271 0.67 +0.2 615,994 + MPMX19_03271 0.67 +1.7 615,994 + MPMX19_03271 0.67 -0.1 615,995 - MPMX19_03271 0.67 +0.8 615,995 - MPMX19_03271 0.67 -1.2 615,995 - MPMX19_03271 0.67 -0.3 616,063 + MPMX19_03271 0.73 -0.7 616,063 + MPMX19_03271 0.73 -1.3 616,063 + MPMX19_03271 0.73 +1.5 616,064 - MPMX19_03271 0.73 +0.2 616,064 - MPMX19_03271 0.73 -0.6 616,064 - MPMX19_03271 0.73 -0.3 616,064 - MPMX19_03271 0.73 +1.0 616,064 - MPMX19_03271 0.73 +0.6 616,064 - MPMX19_03271 0.73 -0.0 616,240 + +0.0 616,240 + +0.9 616,240 + +0.4 616,241 - -0.7 616,241 - -0.1 616,241 - -0.5 616,241 - -1.0 616,241 - +0.6 616,241 - -0.7 616,241 - +0.0 616,241 - +0.3 616,356 + -0.4 616,356 + -0.6 616,356 + +0.6 616,356 + -2.6 616,395 + +1.0 616,395 + +0.2 616,395 + -0.8 616,395 + -1.7 616,395 + -0.0 616,396 - -0.5 616,396 - -0.3 616,396 - +0.4 616,396 - -0.6 616,608 + MPMX19_03272 0.24 -0.6 616,608 + MPMX19_03272 0.24 -0.8 616,608 + MPMX19_03272 0.24 -1.8 616,608 + MPMX19_03272 0.24 -0.4 616,609 - MPMX19_03272 0.24 +0.8 616,609 - MPMX19_03272 0.24 -0.3 616,617 + MPMX19_03272 0.25 +0.0 616,618 - MPMX19_03272 0.25 +1.7 616,734 + MPMX19_03272 0.36 -1.0 616,734 + MPMX19_03272 0.36 +0.2 616,734 + MPMX19_03272 0.36 +0.3 616,923 + MPMX19_03272 0.54 +0.1 616,923 + MPMX19_03272 0.54 +0.6 616,923 + MPMX19_03272 0.54 -1.1 616,923 + MPMX19_03272 0.54 -1.2 616,923 + MPMX19_03272 0.54 +0.0 616,923 + MPMX19_03272 0.54 +0.1 616,923 + MPMX19_03272 0.54 +0.6 616,923 + MPMX19_03272 0.54 +1.7 616,923 + MPMX19_03272 0.54 +1.0 616,923 + MPMX19_03272 0.54 +0.3 616,923 + MPMX19_03272 0.54 -0.2 616,923 + MPMX19_03272 0.54 +1.2 616,923 + MPMX19_03272 0.54 -0.1 616,923 + MPMX19_03272 0.54 -0.3 616,923 + MPMX19_03272 0.54 +0.0 616,924 - MPMX19_03272 0.54 -0.6 616,924 - MPMX19_03272 0.54 -0.2 616,924 - MPMX19_03272 0.54 -0.8 616,924 - MPMX19_03272 0.54 -0.6 616,924 - MPMX19_03272 0.54 -0.6 616,924 - MPMX19_03272 0.54 +0.8 616,924 - MPMX19_03272 0.54 -1.8 616,924 - MPMX19_03272 0.54 -0.6 616,924 - MPMX19_03272 0.54 +0.7 616,924 - MPMX19_03272 0.54 -1.2 616,924 - MPMX19_03272 0.54 +0.5 617,022 + MPMX19_03272 0.64 -0.4 617,022 + MPMX19_03272 0.64 +0.0 617,022 + MPMX19_03272 0.64 -1.2 617,022 + MPMX19_03272 0.64 -0.5 617,022 + MPMX19_03272 0.64 +0.7 617,023 - MPMX19_03272 0.64 -0.8 617,232 + MPMX19_03272 0.84 -0.4 617,233 - MPMX19_03272 0.84 -1.1 617,233 - MPMX19_03272 0.84 -0.3 617,444 + -0.3 617,444 + -0.1 617,444 + +0.1 617,444 + -0.9 617,444 + +0.5 617,444 + +0.3 617,444 + +0.1 617,444 + -0.8 617,444 + +0.2 617,444 + -0.1 617,444 + +0.2 617,444 + -0.6 617,444 + -0.4 617,444 + -0.2 617,444 + -1.1 617,445 - +0.0 617,445 - -1.4 617,445 - -0.9 617,445 - +0.7 617,445 - -1.1 617,445 - -1.3 617,445 - +1.6 617,445 - +0.3 617,445 - -0.8 617,445 - -2.0 617,445 - +0.4 617,445 - -0.6 617,445 - -0.0 617,445 - -0.8 617,445 - +0.6 617,445 - +0.3 617,445 - +1.2 617,445 - -0.7 617,445 - +1.9 617,537 + +1.3 617,537 + +1.7 617,538 - -1.5 617,538 - -0.8 617,538 - +0.3 617,588 + +0.6 617,589 - +1.0 617,589 - +0.3 617,589 - +0.2 617,589 - +1.9 617,589 - +0.2 617,589 - -0.5 617,589 - -0.3 617,777 + MPMX19_03273 0.16 -1.4 617,777 + MPMX19_03273 0.16 -0.1 617,777 + MPMX19_03273 0.16 +0.5 617,777 + MPMX19_03273 0.16 +0.5 617,778 - MPMX19_03273 0.16 -1.6 617,778 - MPMX19_03273 0.16 -0.2 617,778 - MPMX19_03273 0.16 -0.1 617,813 + MPMX19_03273 0.18 +0.2 617,813 + MPMX19_03273 0.18 -0.1 617,814 - MPMX19_03273 0.18 +0.5 617,814 - MPMX19_03273 0.18 -1.6 617,814 - MPMX19_03273 0.18 +0.3 617,814 - MPMX19_03273 0.18 -0.3 617,814 - MPMX19_03273 0.18 +0.2 617,814 - MPMX19_03273 0.18 +1.4 617,948 + MPMX19_03273 0.23 +0.2 617,948 + MPMX19_03273 0.23 -1.4 617,948 + MPMX19_03273 0.23 -1.5 617,948 + MPMX19_03273 0.23 +0.6 617,949 - MPMX19_03273 0.23 -0.9 617,949 - MPMX19_03273 0.23 +0.6 617,949 - MPMX19_03273 0.23 -0.2 617,949 - MPMX19_03273 0.23 -0.8 617,949 - MPMX19_03273 0.23 +0.7 618,002 + MPMX19_03273 0.26 -0.6 618,003 - MPMX19_03273 0.26 -0.1 618,003 - MPMX19_03273 0.26 +2.2 618,003 - MPMX19_03273 0.26 +0.6 618,003 - MPMX19_03273 0.26 +0.5 618,003 - MPMX19_03273 0.26 +0.3 618,003 - MPMX19_03273 0.26 -0.1 618,003 - MPMX19_03273 0.26 +0.2 618,003 - MPMX19_03273 0.26 +0.6 618,003 - MPMX19_03273 0.26 +1.4 618,005 + MPMX19_03273 0.26 -0.8 618,005 + MPMX19_03273 0.26 +0.2 618,005 + MPMX19_03273 0.26 -0.7 618,006 - MPMX19_03273 0.26 +0.6 618,006 - MPMX19_03273 0.26 -0.8 618,056 + MPMX19_03273 0.28 -1.3 618,056 + MPMX19_03273 0.28 -0.1 618,057 - MPMX19_03273 0.28 -0.6 618,057 - MPMX19_03273 0.28 -0.1 618,077 + MPMX19_03273 0.29 -1.4 618,078 - MPMX19_03273 0.29 -0.4 618,107 + MPMX19_03273 0.30 +0.3 618,107 + MPMX19_03273 0.30 -0.8 618,107 + MPMX19_03273 0.30 -1.7 618,107 + MPMX19_03273 0.30 +1.7 618,107 + MPMX19_03273 0.30 +1.7 618,107 + MPMX19_03273 0.30 +0.5 618,107 + MPMX19_03273 0.30 +0.9 618,107 + MPMX19_03273 0.30 -2.6 618,107 + MPMX19_03273 0.30 -1.7 618,107 + MPMX19_03273 0.30 -1.1 618,108 - MPMX19_03273 0.30 -0.5 618,108 - MPMX19_03273 0.30 +0.7 618,108 - MPMX19_03273 0.30 -0.4 618,108 - MPMX19_03273 0.30 -0.8 618,108 - MPMX19_03273 0.30 -1.2 618,108 - MPMX19_03273 0.30 -0.3 618,108 - MPMX19_03273 0.30 -1.2 618,108 - MPMX19_03273 0.30 -1.8 618,108 - MPMX19_03273 0.30 -1.0 618,108 - MPMX19_03273 0.30 -1.4 618,108 - MPMX19_03273 0.30 -2.1 618,108 - MPMX19_03273 0.30 -0.6 618,265 - MPMX19_03273 0.37 +0.5 618,321 - MPMX19_03273 0.39 -0.1 618,321 - MPMX19_03273 0.39 -0.6 618,321 - MPMX19_03273 0.39 -0.4 618,321 - MPMX19_03273 0.39 -0.2 618,398 - MPMX19_03273 0.42 +0.3 618,398 - MPMX19_03273 0.42 -0.6 618,398 - MPMX19_03273 0.42 -0.1
Or see this region's nucleotide sequence